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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank103Aligned Residues249
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   286...290.........300.........310.........320.........330.........340.....
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Query Sequence  TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTMEVEEFLKEAAVMKEIKHPNLV
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVV
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   7..10.........20.........30.........40...... ...50.........60.....
 
   346...350.........360.........370.........380.........390.........400.....
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Query Sequence  QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLEKKNF
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Template Sequence  KFYGHRREGNIQYLFLEYCSGGELFDRI. . EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI
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STT


TTGGGGS..BTTTB

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   6970.........80.........90...... ...100.........110.........120......
 
   406...410.........420.........430.... .....440.........450.........460.. .
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Query Sequence  IHRDLAARNCLVGENHVVKVADFGLSRLM. TGDTYTAHAGAKFPIKWTAPESLAYNTF. S
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Template Sequence  THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA
Template Known Secondary structure 
S

SGGG
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TT

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B
S

S
GGGS

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   127..130.........140.........150.........160.........170.........180......
 
   464.....470.........480.........490.... .....500.........510.........520.
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Query Sequence  IKSDVWAFGVLLWEIATYGMSPYPGIDLSQV. . YDLLEKGYRMEQPEGCPPKVYELMRAC
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Template Sequence  EPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
Template Known Secondary structure  .SS
S
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TTSTTGGGT
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   187..190.........200... ......210.........220.........230.........240.....
 
   522.......530........
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Query Sequence  WKWSPADRPSFAETHQA
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Template Sequence  LVENPSARITIPDIKKD
Template Known Secondary structure  S
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   246...250.........260..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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