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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank92Aligned Residues251
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   285....290.........300.........310.........320. ........330.........340.
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Query Sequence  RTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKE. . . DTMEVEEFLKEAAVMKEIKH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


SS




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   10.........20.........30.........40.........50.........60.........
 
   342.......350.........360.........370.........380.........390.........400.
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Query Sequence  PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLE
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCH
Template Known Secondary structure  TTB


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S
B..TT
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   70.........80.........90.........100. ........110.........120.......
 
   402.......410....... ..420.........430.........440.........450........
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Query Sequence  KKNFIHRDLAARNCLV. . . GENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
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Template Sequence  SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE. . AWHGFAGTPGYLSPEVLK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

..B


S
S
GGG

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   128.130.........140.........150.........160....... ..170.........180.....
 
   459460.........470.........480.........490.........500....... ..510.....
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Query Sequence  YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQP. . . EGCPPKVY
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Template Sequence  KDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  T

B
T.SS
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SSTT




TTGGGGS
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   187..190.........200........ .210.........220.........230.........240.....
 
   516...520.........530.........540
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Query Sequence  ELMRACWKWSPADRPSFAETHQAFE
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Template Sequence  SLIDSMLTVNPKKRITADQALKVPW
Template Known Secondary structure  S
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TTS
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   246...250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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