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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank3Aligned Residues429
% Identity44%Templatec1y57A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: structure of unphosphorylated c-src in complex with an inhibitor
Resolution1.91 Å
Model Dimensions (Å)X:95.092 Y:63.409 Z:49.675

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140......... 150.........160........
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Query Sequence  NLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVR. SKNGQGWVPSNYITPVNSL
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Template Sequence  TTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSI
Template Known Secondary structure  TSS
B


SSSB

B
TT

S

SSSSTTT

GGGTTSG
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   84.....90.........100.........110.........120.........130.........140...
 
   169170.........180.........190 .........200.........210... ......220.
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Query Sequence  EKHSWYHGPVSRSAAEYLLSSL. . INGSFLVRESESSPGQLSISLRY. . . . . EGRVYHYR
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Template Sequence  QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK
Template Known Secondary structure  GGSTTS

T
TT

TT

SSSTT
TTT
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   144.....150.........160.........170.........180.........190.........200...
 
   222.......230.........240.........250.........260.........270.........280.
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Query Sequence  INTTTDSKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKCNKPTVYGVSPIHDKW
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Template Sequence  IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPT. . . SKPQTQGLAKDAW
Template Known Secondary structure 
SSS
SSTTSSS

TTSSS



B


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   204.....210.........220.........230.........240....... ..250.........260
 
   282.......290.........300.........310.........320.........330.........340.
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Query Sequence  EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTMEVEEFLKEAAVMKEIKH
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Template Sequence  EIPRESLRLEVKLGQGCFGEVWMGTWNG. TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH
Template Known Secondary structure  B

GGGTTTT.T
TTSS



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   261........270.........280........ .290.........300.........310.........
 
   342.......350.........360.........370.........380.........390.........400.
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Query Sequence  PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLE
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Template Sequence  EKLVQLYAVVS. EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE
Template Known Secondary structure  TTB


.SSS


TTS

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   320.........330 .........340.........350.........360.........370........
 
   402.......410.........420.........430.........440.........450.........460.
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Query Sequence  KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT
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Template Sequence  RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR
Template Known Secondary structure  TT
S

SGGG
GGG



TT


SS




TTTT
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   379380.........390.........400.........410.........420.........430........
 
   462.......470.........480.........490.........500.........510.........520.
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Query Sequence  FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRAC
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Template Sequence  FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC
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TTS

SSTT

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TT

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   439440.........450.........460.........470.........480.........490........
 
   522.......530.........540...
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Query Sequence  WKWSPADRPSFAETHQAFETMF
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Template Sequence  WRKEPEERPTFEYLQAFLEDYF
Template Known Secondary structure  T
SSGGGS

T
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   499500.........510.........520
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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