Return to main results Retrieve Phyre Job Id

Job DescriptionP26450
Confidence100.00%DateTue Jul 30 13:13:01 BST 2013
Rank18Aligned Residues181
% Identity27%Templated1xa6a1
SCOP infoGTPase activation domain, GAP GTPase activation domain, GAP BCR-homology GTPase activation domain (BH-domain)
Resolution3.20
Model Dimensions (Å)X:48.309 Y:45.046 Z:31.739

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150..... ....160.........
Predicted Secondary structure 
























.


Query SS confidence 












































.













Query Sequence  QALPLPDLAEQFAPPDVAPPLLIKLLEAIEKKGLECSTLYRTQSS. SNPAELRQLLDCDA
Query Conservation   

    
         

  
  
   

  

  




 

 .     
        
Alig confidence 










..































.













Template Conservation 

  
      ..    

 

      
   
   




  
    
  
        
Template Sequence  YCCDLTTLVKA. . HNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG
Template Known Secondary structure  TTS
..T
SS
S
SSSTTTTTS


SSTT
Template Predicted Secondary structure 



..




















Template SS confidence 



























































   273......280... ......290.........300.........310.........320.........330
 
   170...... ...180.........190.........200.........210.........220......
Predicted Secondary structure 






...











Query SS confidence 






. . .

















































Query Sequence  ASVDLEM. . . IDVHVLADAFKRYLADLPNPVIPVAVYNEMMSLAQELQSPEDCIQLLKKL
Query Conservation      
  ... 

  

  

 





 


    
  
                    
Alig confidence 






...
















































.
Template Conservation             
   

  

  

 

 


                       
   .
Template Sequence  EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEV.
Template Known Secondary structure  TTS


SSSS

T
SS
TT
STTTTTT


.
Template Predicted Secondary structure 





















.
Template SS confidence 



























































   331........340.........350.........360.........370.........380.........
 
   227..230.........240.........250.........260.........270......... 280..
Predicted Secondary structure 











....


Query SS confidence 




















































. . . .


Query Sequence  IRLPNIPHQCWLTLQYLLKHFFKLSQASSKNLLNARVLSEIFSPVLFRFPAAS. . . . SDN
Query Conservation       

     

  
  

  
      
 
   





 
 
 
     ....   
Alig confidence  ..


















































....


Template Conservation  ..
  

      
  
   
  
      



  


  


 
              
Template Sequence  . . LMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHD
Template Known Secondary structure  ..TTS
TTTTTTTTTTS


TTTS




S
TTGGGGT
Template Predicted Secondary structure  ..












Template SS confidence 



























































   390.........400.........410.........420.........430.........440.......
 
   283......290......
Predicted Secondary structure 
Query SS confidence 













Query Sequence  TEHLIKAIEILIST
Query Conservation            
   
Alig confidence 













Template Conservation        

  

  
Template Sequence  MRYQKLIVQILIEN
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 













   448.450.........460.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D