Return to main results Retrieve Phyre Job Id

Job DescriptionP26450
Confidence100.00%DateTue Jul 30 13:13:01 BST 2013
Rank11Aligned Residues184
% Identity88%Templated1pbwa_
SCOP infoGTPase activation domain, GAP GTPase activation domain, GAP BCR-homology GTPase activation domain (BH-domain)
Resolution2.00
Model Dimensions (Å)X:43.419 Y:49.138 Z:34.440

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170....
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  LPDLAEQFAPPDVAPPLLIKLLEAIEKKGLECSTLYRTQSSSNPAELRQLLDCDAASVDL
Query Conservation     
         

  
  
   

  

  




 

      
            
Alig confidence 



























































Template Conservation 
  
         

  
      
   

  




  
      
             
Template Sequence  LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDL
Template Known Secondary structure 




TTS
S
TT
TTTTSS

S

TTS
SSSS


G
Template Predicted Secondary structure 



























Template SS confidence 



























































   115....120.........130.........140.........150.........160.........170....
 
   175....180.........190.........200.........210.........220.........230....
Predicted Secondary structure 















Query SS confidence 



























































Query Sequence  EMIDVHVLADAFKRYLADLPNPVIPVAVYNEMMSLAQELQSPEDCIQLLKKLIRLPNIPH
Query Conservation     

  

  

 





 


    
  
                         

 
Alig confidence 



























































Template Conservation     
   

  

 


 

 


                                 
  
Template Sequence  EMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPH
Template Known Secondary structure  GGS
TSSS
SS
GGG

ST
TTS
Template Predicted Secondary structure 

















Template SS confidence 



























































   175....180.........190.........200.........210.........220.........230....
 
   235....240.........250.........260.........270.........280.........290....
Predicted Secondary structure 












Query SS confidence 



























































Query Sequence  QCWLTLQYLLKHFFKLSQASSKNLLNARVLSEIFSPVLFRFPAASSDNTEHLIKAIEILI
Query Conservation      

  
  

  
      
 
   





 
 
 
                  
 
Alig confidence 



























































Template Conservation       
  
   
  
   
  
 
   


  


 

               

  

Template Sequence  QYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILI
Template Known Secondary structure  T


T
SS

Template Predicted Secondary structure 









Template SS confidence 



























































   235....240.........250.........260.........270.........280.........290....
 
   295...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  STEW
Query Conservation      
Alig confidence 



Template Conservation   
  
Template Sequence  STEW
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 



   295...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D