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Job DescriptionP26450
Confidence23.10%DateTue Jul 30 13:13:01 BST 2013
Rank436Aligned Residues116
% Identity16%Templatec3vkhA_
PDB info PDB header:motor proteinChain: A: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of a functional full-length dynein motor domain
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   442.......450.........460.........470.........480.........490.........500.
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Query Sequence  IEAVGKKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQ
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Template Sequence  INEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQD
Template Known Secondary structure  T
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   3271........3280.........3290.........3300.........3310.........3320.........3330
 
   502.......510.........520.........530.........540.........550.........560.
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Query Sequence  ERYSKEYIEKFKREGNEKEIQRIMHNHDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDK
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Template Sequence  QQAA. . . . . . . . . . . . EIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPAIIEAQE
Template Known Secondary structure  ............TTSGGGGGTTTTGGGTST
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   3331... .....3340.........3350.........3360.........3370........
 
   562.......
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Query Sequence  RMNSIKPD
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Template Sequence  AVSTIKKK
Template Known Secondary structure  S

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   33793380......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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