Job Description P26450 Confidence 21.42% Date Tue Jul 30 13:13:01 BST 2013 Rank 438 Aligned Residues 49 % Identity 14% Template c3ns4A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 53; PDBTitle: structure of a c-terminal fragment of its vps53 subunit suggests2 similarity of garp to a family of tethering complexes Resolution 2.90 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		A	D	A	F	K	R	Y	L	A	D	L	P	N	P	V	I	.	.	.	.	.	.	.	.	.	P	V	A	V	Y	N	E	M	M	S	L	A	Q	E	L	Q	S	P	E	D	C	I	Q	L	L	K	K	L	I	R	L	P	N	I	P
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.													.	.	.	.	.													.
Template Conservation																																							.	.	.	.	.													.
Template Sequence		L	E	L	L	K	E	I	F	H	T	L	P	E	S	V	S	N	D	S	D	L	R	E	N	T	S	Y	K	R	V	K	R	H	A	D	N	N	.	.	.	.	.	I	D	Q	L	L	K	F	I	K	L	L	X	.	A	P	L	D	S
Template Known Secondary structure												G	G	G	G	G		S				T	T																.	.	.	.	.												T	.				S
Template Predicted Secondary structure																																							.	.	.	.	.													.
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.						.	.	.	.	670	.	.	.	.	.	.	.		.	.	680	.	.
		234	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	C	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	D	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		683	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D