Return to main results Retrieve Phyre Job Id

Job DescriptionP26450
Confidence98.42%DateTue Jul 30 13:13:01 BST 2013
Rank138Aligned Residues73
% Identity18%Templatec2ysqA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 9; PDBTitle: solution structure of the sh3 domain from rho guanine2 nucleotide exchange factor 9
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60...
Predicted Secondary structure 















































Query SS confidence 



























































Query Sequence  EGYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEDIGWLNGYNETT
Query Conservation       
                 
   
                  
    
  
     
Alig confidence 


































...............




..


Template Conservation      
 




 
    



  

 
 

     ............... 

  ..   
Template Sequence  SIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNK. . . . . . . . . . . . . . . DWWWG. . QID
Template Known Secondary structure 

SS



SSSSS



TT


SS...............S..
S
Template Predicted Secondary structure 
















...............

..
Template SS confidence 



























































   910.........20.........30.........40... ..... .50.
 
   64.....70.........80.........90...
Predicted Secondary structure 






















Query SS confidence 





























Query Sequence  GERGDFPGTYVEYIGRKRISPPTPKPRPPR
Query Conservation     
 

   
                   
Alig confidence 





























Template Conservation 
  
  
  


              
  
Template Sequence  DEEGWFPASFVRLWVNQEDEVEEGSGPSSG
Template Known Secondary structure  S
GGGSS














Template Predicted Secondary structure 


















Template SS confidence 





























   52.......60.........70.........80.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D