Return to main results Retrieve Phyre Job Id

Job DescriptionP26450
Confidence97.91%DateTue Jul 30 13:13:01 BST 2013
Rank286Aligned Residues71
% Identity17%Templatec2rqvA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of sh3ci domain of bem1p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  AEGYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEDIGWLNGYNET
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Template Sequence  LGSLYAIVLYDFKAEKADELTTYVGENLFICAHH. . . . . . . . . . . . . . NCEWFIAKPIGR
Template Known Secondary structure 
S


SS




SSSB



SS



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SSS
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   155....160.........170.........180........ .190.........200
 
   63......70.........80.......
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Query Sequence  TGERGDFPGTYVEYIGRKRISPPTP
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Template Sequence  LGGPGLVPVGFVSIIDIATGYATGN
Template Known Secondary structure  S


STT
B


SSSS


S
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   201........210.........220.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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