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Job DescriptionP26450
Confidence99.98%DateTue Jul 30 13:13:01 BST 2013
Rank28Aligned Residues174
% Identity22%Templatec2qv2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; PDBTitle: a role of the lowe syndrome protein ocrl in early steps of2 the endocytic pathway
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.... .....130.........140.
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Query Sequence  QALPLPDLAEQFAP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . PDVAPPLLIKLLEAIEK
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Template Sequence  FGTSLEALCRMKRPIREVPVTKLIDLEEDSFLEKEKSLLQMERPLQVPKEIWLLVDHLFK
Template Known Secondary structure  TTS
TT
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   121........130.........140.........150.........160.........170.........180
 
   142.......150..... ....160.........170.........180.........190.........200
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Query Sequence  KGLECSTLYRTQSS. SNPAELRQLLDCDAASVDLEMIDVHVLADAFKRYLADLPNPVIPV
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Template Sequence  YACHQEDLFQTPGMQEELQQIIDCLDTSIPETIPG. . SNHSVAEALLIFLEALPEPVICY
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TT
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   189190.........200.........210.........220... ......230.........240......
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  AVYNEMMSLAQELQSPEDCIQLLKKLIRLPNIPHQCWLTLQYLLKHFFKLSQASSKNLLN
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Template Sequence  ELYQRCLDSAY. . . . . . . . . DPRICRQVISQLPRCHRNVFRYLMAFLRELLKFSEYNSVN
Template Known Secondary structure  GGTT.........
TS
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   247..250....... ..260.........270.........280.........290.......
 
   261........270......... 280.........290.....
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Query Sequence  ARVLSEIFSPVLFRFPAAS. . SDNTEHLIKAIEILIS
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Template Sequence  ANMIATLFTSLLLRPPPNLMARQTPSDRQRAIQFLLG
Template Known Secondary structure  B


GGGT



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   298.300.........310.........320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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