Job Description P26450 Confidence 98.28% Date Tue Jul 30 13:13:01 BST 2013 Rank 168 Aligned Residues 58 % Identity 33% Template c2js0A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of second sh3 domain of adaptor nck Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	D	I	G	W	L	N	G	Y	N	E	T	T	G
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		N	M	P	A	Y	V	K	F	N	Y	M	A	E	R	E	D	E	L	S	L	I	K	G	T	K	V	I	V	M	E	K	C	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	W	R	G	.	.	S	Y	N	G
Template Known Secondary structure		S							S		B				S	T	T	B			B		T	T										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					.	.			T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																.	.	40	.	.			.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	G	W	F	P	S	N	Y	V	T	E	E	G	D
Template Known Secondary structure								G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D