Return to main results Retrieve Phyre Job Id

Job DescriptionP26450
Confidence99.77%DateTue Jul 30 13:13:01 BST 2013
Rank100Aligned Residues95
% Identity26%Templatec2ci8A_
PDB info PDB header:translationChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: sh2 domain of human nck1 adaptor protein - uncomplexed
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   622.......630......... 640.........650. ........660.........670.........
Predicted Secondary structure 









.





.











Query SS confidence 

















.











.



























Query Sequence  KTWNVGSSNRNKAENLLR. GKRDGTFLVRES. SKQGCYACSVVVDGEVKHCVINKTATGY
Query Conservation    
 

 
 
 


 

 .   






 
.   
 



      
 
  
     

Alig confidence 

















.











.



























Template Conservation   




 
 
  

 

      
 



 
      
 


       
  
       
Template Sequence  SPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVY
Template Known Secondary structure 
TT


S



TT

SSSTTSTT





Template Predicted Secondary structure 



























Template SS confidence 



























































   280.........290.........300.........310.........320.........330.........
 
   680.........690.........700.........710........
Predicted Secondary structure 





















Query SS confidence 






































Query Sequence  GFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPV
Query Conservation   

       

  

 

   

  


 
 
 
  

Alig confidence 

..


































Template Conservation    ..    
 

  

  
    
        
 
  

Template Sequence  CI. . GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKHL
Template Known Secondary structure  ..TTSSS
S
TT







Template Predicted Secondary structure  ..













Template SS confidence 






































   340. ........350.........360.........370......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D