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Job DescriptionP26450
Confidence99.87%DateTue Jul 30 13:13:01 BST 2013
Rank36Aligned Residues160
% Identity47%Templatec1y57A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: structure of unphosphorylated c-src in complex with an inhibitor
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.......
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Query Sequence  YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEDIGWLNGYNETTGERG
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Template Sequence  FVALYDYESRTETDLSFKKGERLQIVNNTEG. . . . . . . . . . . . . . . DWWLAHSLSTGQTG
Template Known Secondary structure  SS
B


SSSB

B
TT

S

SSS...............STTT

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   86...90.........100.........110...... ...120.........130
 
   68.70.........80.........90.........100.........110.........120.......
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Query Sequence  DFPGTYVEYIGRKRISPPTPKPRPPRPLPVAPGSSKTEADTEQQALPLPDLAEQFAPPDV
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Template Sequence  YIPSNYVA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGG....................................................
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   131.......
 
   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  APPLLIKLLEAIEKKGLECSTLYRTQSSSNPAELRQLLDCDAASVDLEMIDVHVLADAFK
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   188.190.........200.........210.........220.........230.........240.......
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Query Sequence  RYLADLPNPVIPVAVYNEMMSLAQELQSPEDCIQLLKKLIRLPNIPHQCWLTLQYLLKHF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   248.250.........260.........270.........280.........290.........300.......
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Query Sequence  FKLSQASSKNLLNARVLSEIFSPVLFRFPAASSDNTEHLIKAIEILISTEWNERQPAPAL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   308.310.........320.........330.........340........ .350.........360.....
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Query Sequence  PPKPPKPTTVANNSMNNNMSLQDAEWYWGDISREEVNEKLR. . DTADGTFLVRDASTKMH
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Template Sequence  . . . . . . . . . . . . . . . . PSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT. K
Template Known Secondary structure  ................TTSGGGSTTS

T
TT

TT

SSS.T
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   139140.........150.........160.........170.........180 .
 
   366...370... ......380... ......390.........400.........410.........
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Query Sequence  GDYTLTLR. . . . . KGGNNKLIKI. FHRDGKYGFSDPLTFNSVVELINHYRNESLAQYNPK
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Template Sequence  GAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADG. . . . .
Template Known Secondary structure  T
TTT
SSS
SSTTSSS

TT.....
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   182.......190.........200.........210.........220.........230......
 
   420.........430......
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Query Sequence  LDVKLLYPVSKYQQDQV
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Template Conservation 
   
            
Template Sequence  LCHRLTTVCPTSKPQTQ
Template Known Secondary structure  SSS



B







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   237..240.........250...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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