Job Description P26450 Confidence 99.83% Date Tue Jul 30 13:13:01 BST 2013 Rank 66 Aligned Residues 99 % Identity 28% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

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		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.		.	.	.	.	.	.	.	650	.		.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure																										.										.
Query SS confidence																										.										.
Query Sequence		H	D	E	K	T	W	N	V	G	S	S	N	R	N	K	A	E	N	L	L	R	G	K	R	.	D	G	T	F	L	V	R	E	S	.	S	K	Q	G	C	Y	A	C	S	V	V	V	D	G	E	V	K	H	C	V	I	N	K	T	A
Query Conservation																										.										.
Alig confidence																										.										.
Template Conservation
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E
Template Known Secondary structure						S	S	B			S																T	T								S	S	S	T	T								S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		677	.	.	680	.	.	.	.	.	.	.						.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		T	G	Y	G	F	A	E	P	Y	N	L	.	.	.	.	.	Y	S	S	L	K	E	L	V	L	H	Y	Q	H	T	S	L	V	Q	H	N	D	S	L	N	V	T	L	A	Y	P	V	Y	A	Q	Q
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F	R	K	I	K	N	L	I	S	A	F	Q	K	P	D	.	.	.	.	.	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K	S
Template Known Secondary structure		T	S							S	T	T	S						S	S								T	T	S	S		.	.	.	.	.	S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D