Job Description P26450 Confidence 94.54% Date Tue Jul 30 13:13:01 BST 2013 Rank 339 Aligned Residues 183 % Identity 13% Template c1ei3C_ PDB info PDB header:blood clotting Chain: C: PDB Molecule:fibrinogen; PDBTitle: crystal structure of native chicken fibrinogen Resolution 5.50 Å

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		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	E	Y	N	T	Q	F	Q	E	K	S	R	E	Y	D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	C	Q	T	Q	E	R	Y	S	K	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	A	T	R	E	N	C	C	I	L	D	E	R	F	G	S	Y	C	P	T	T	C	G	I	A	D	F	F	N	K	Y	R	L	T	T	D	G	E	L	L	E	I	E	G	L	L	Q	Q	A	T	N	S	T	G	S	I	E	Y	L
Template Known Secondary structure																S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	F	K	R	E	G	N	E	K	E	I	Q	R	I	M	H	N	H	D	K	L	K	S	R	I	S	E	I	I	D	S	R	R	R	L	E	E	D	L	K	K	Q	A	A	E	Y	R	E	I	D	K	R	M	N	S	I	K	P
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		I	Q	H	I	K	T	I	Y	.	P	S	E	K	Q	T	L	P	Q	S	I	E	Q	L	T	Q	K	S	K	K	I	I	E	E	I	I	R	Y	E	N	T	I	L	A	H	E	N	T	I	Q	Q	L	T	D	M	H	I	M	N	S	N
Template Known Secondary structure										.																	T	T	S	T
Template Predicted Secondary structure										.
Template SS confidence
		61	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	Q	L	R	K	T	R	D	Q	Y	L	M	W	L	T	Q	K	G	V	R	Q	K	K	L	N	E	W	L	G	N	E	N	T	E	D	Q	Y	S	L	V	E	D	D	E	D	L	P	H	H	D	E	K	T	W	N	V	G	S
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	Q	L	K	Q	K	I	A	Q	L	E	S	H	C	Q	E	P	C	K	D	T	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	E	T	T
Template Known Secondary structure																T	T		S					S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																															.	.	.	.	.
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	R	N	K	A	E	N	L	L	R	G	K	R	D	G	T	F	L	V	R	E	S	S	K	Q	G	C	Y	A	C	S	V	V	V	D
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		G	R	D	C	Q	D	I	A	N	K	G	A	R	K	S	G	L	Y	F	I	K	P	Q	K	A	K	Q	S	F	.	.	L	V	Y	C	E
Template Known Secondary structure		B	S	S							T	T					S							S	S		S	S			.	.
Template Predicted Secondary structure																															.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D