Job Description P26450 Confidence 93.49% Date Tue Jul 30 13:13:01 BST 2013 Rank 341 Aligned Residues 156 % Identity 13% Template c1deqF_ PDB info PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen (gamma chain); PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution) Resolution 3.50 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	C	Q	T	Q	E	R	Y	S	K	E	Y	I	E	K	F	K	R	E	G	N	E	K	E	I	Q	R
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	N	N	Y	Q	T	S	V	D	K	D	L	R	T	L	E	G	I	L	Y	Q	V	E	N	K	T	S	E	A	R	E	L	V	K	A	I	Q	I	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	N	P	D	Q	P	S
Template Known Secondary structure																		T	T	T	S	B	T	T	B																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.													.	70	.	.	.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	H	N	H	D	K	L	K	S	R	I	S	E	I	I	D	S	R	R	R	L	E	E	D	L	K	K	Q	A	A	E	Y	R	E	I	D	K	R	M	N	S	I	K	P	D	L	I	Q	L	R	K	T	R	D	Q	Y	L	M	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	N	N	I	E	S	A	T	K	N	S	K	S	M	M	E	E	I	M	K	Y	E	T	L	I	S	T	H	E	S	T	I	R	F	L	Q	E	I	Y	N	S	N	S	Q	K	I	V	N	L	R	D	K	V	V	Q	L	E	A	N
Template Known Secondary structure		T	T	T													T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	T	Q	K	G	V	R	Q	K	K	L	N	E	W	L	G	N	E	N	T	E	D	Q	Y	S	L	V	E	D	D	E	D	L	P	H	H	D	E	K	T	W	N	V	G	S	S	N	R	N	K	A	E	N	L	L	R	G	K	R	.
Query Conservation																																																													.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	C	Q	D	T	V	K	I	H	D	V	T	G	R	D	C	Q	D	V	A	N	K	G	A	K	E
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									B	S				S	S							T	T			S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.																																.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	T	F	L	V	R	E	S	S	K	Q	G	C	Y	A	C	S	V	V	V	D
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		S	G	L	Y	F	I	R	P	.	.	L	K	A	K	Q	Q	F	L	V	Y	C	E
Template Known Secondary structure			S							.	.	T	T		S	S					B
Template Predicted Secondary structure										.	.
Template SS confidence
		164	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D