 |
| Job Description | A0JNU3 | | Confidence | 26.10% | Date | Wed Jul 10 14:11:33 BST 2013 |
| Rank | 261 | Aligned Residues | 69 |
| % Identity | 19% | Template | c4ewgA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:beta-ketoacyl synthase; |
PDBTitle: crystal structure of a beta-ketoacyl synthase from burkholderia2 phymatum stm815
|
| Resolution | 2.25 Å |
|
 |
|   |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 110 | . | . | . | . | . | . | |
|
|
|
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |
|
|
| . | . | . | . |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
| Query Sequence |   |
S | P | D | Q | R | I | I | Y | T | V | L | E | C | Q | P | L | F | D | S | S | D | M | T | I | T | E | W | V | Q | I | A | Q | T | I | E | R | H | Y | A | Q | Y | Q | . |
. |
. |
. |
. |
. |
G | F | V | V | I | H | G | T | . |
. |
. |
. |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . |
|   |
|
|   |
|
|
| . | . | . | . |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
| Template Conservation |   |
  |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |   |
| Template Sequence |   |
A | R | G | A | T | I | H | A | E | I | V | G | F | G | C | N | S | D | G | A | H | M | T | Q | P | T | A | S | T | M | A | R | A | M | Q | L | A | L | E | D | A | K | L | D | A | N | A | I | A | Y | V | N | A | H | G | T | S | T | D | R |
| Template Known Secondary structure |   |
 | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |
|
|
|
|
|
|  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
|   |
|   |   |
|
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
. |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
| Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
. |
D | T | M | A | F | A | A | S | V | L | S | F | M | L | E | N | L | Q | K | P | V | V |
| Query Conservation |   |
. |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
| Alig confidence |   |
. |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|   |   |
| . | . |
|   |   |   |
|
|   | . |   |   |
|
|   |
| Template Sequence |   |
G | D | V | A | E | S | Q | A | . |
. |
T | A | R | T | F | G | E | . |
R | M | P | I | S |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
| T | . | T |
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
|
| . |
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
308 | . | 310 | . | . | . | . | . | |
|
. | . | . | . | 320 | . | . | |
. | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|