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Job DescriptionA0JNU3
Confidence99.85%DateWed Jul 10 14:11:33 BST 2013
Rank41Aligned Residues159
% Identity25%Templatec3d9hA_
PDB info PDB header:structural protein, protein bindingChain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   394.....400.........410.........420.........430.........440.........450...
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Query Sequence  KDVLLPGLALAAAHAGDLDTLQAFVELDRDLNLKDYSGQTPLHVAARRGHAAVVTMLLQR
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Template Sequence  DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH
Template Known Secondary structure  SS

S

TT
TT

S

TT


TT
T
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   32.......40.........50.........60.........70.........80.........90.
 
   454.....460.........470.........480........
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Query Sequence  GADVDARNEDGQSPLLLAVRGRHQSVIGLLRAAGA. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVN
Template Known Secondary structure  T

SS


TT


T
TT

SS
S
TTS
T
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   92.......100.........110.........120.........130.........140.........150.
 
   489490.........500.........510
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RLSPQELEDVGTELCRLASRGD
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Template Sequence  SLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTAS
Template Known Secondary structure  TT

TT

BTTTB
TT
TT

TT

BTTB
TT
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   152.......160.........170.........180.........190.........200.........210.
 
   511........520.........530.........540.........550....
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Query Sequence  SEGLRAWWQAGADLGQPDYDGHCALQVAEAAGNADVVALLQSFK
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Template Sequence  EELACLLMDFGADTQAKNAEGKRPVELVPPES. . PLAQLFLERE
Template Known Secondary structure  TT

TT


TTS

GGGGS
TTS..
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   212.......220.........230.........240... ......250...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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