Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence100.00%DateWed Jul 10 14:11:33 BST 2013
Rank13Aligned Residues315
% Identity19%Templated4pgaa_
SCOP infoGlutaminase/Asparaginase Glutaminase/Asparaginase Glutaminase/Asparaginase
Resolution1.70
Model Dimensions (Å)X:66.761 Y:60.560 Z:38.744

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30 .........40.........50.........60...
Predicted Secondary structure 
















.....










Query SS confidence 





















. . . . .
































Query Sequence  RRLLAIYTGGTIGMRSEGGVLV. . . . . PGRGLAAVLKTLHMFHDEEYAQAHSLPEDTLVL
Query Conservation   




 




       
  .....
       
   
                    
Alig confidence 





















.....



























.....
Template Conservation    
 

 





                     

   
 
     
       .....
Template Sequence  ANVVILATGGTIAGAGASAANSATYQAAKVGVDKLIAGVPELADLANVRGEQVMQ. . . . .
Template Known Secondary structure 
SGGG
SSTT
SSSSS
S
T
TT
.....
Template Predicted Secondary structure 






























.....
Template SS confidence 



























































   10.........20.........30.........40.........50.........60....
 
   64.....70.........80.........90.........100.. .......110.........120.
Predicted Secondary structure 


















..








Query SS confidence 






































. .


















Query Sequence  PPASPDQRIIYTVLECQPLFDSSDMTITEWVQIAQTIER. . HYAQYQGFVVIHGTDTMAF
Query Conservation 
             
    


       
  

  
  ..     

 

 





  
Alig confidence  ...................



















..


















Template Conservation  ...................


   
   
  

  
         

 








  
Template Sequence  . . . . . . . . . . . . . . . . . . . IASESITNDDLLKLGKRVAELADSNDVDGIVITHGTDTLEE
Template Known Secondary structure  ...................
GGG


TT
S

STT
Template Predicted Secondary structure  ...................













Template SS confidence 



























































   65....70.........80.........90.........100.....
 
   122.......130.........140.........150.........160......... 170.........
Predicted Secondary structure 





















..



Query SS confidence 















































. .









Query Sequence  AASVLSFMLENLQKPVVLTGAQVPIHALWSDGRENLLGALLMAGQYVI. . PEVCLFFQNQ
Query Conservation 

  

  
    







  
     


  

  
   
     .. 

 
 
   
Alig confidence 








.





































..









Template Conservation 

  


  .   








 
     


  

  

  
        

 
 
   
Template Sequence  TAYFLNLVQ. KTDKPIVVVGSMRPGTAMSADGMLNLYNAVAVASNKDSRGKGVLVTMNDE
Template Known Secondary structure 
.


S


SS
TTSTT
ST
GGGTTS
S

TT
Template Predicted Secondary structure  .


























Template SS confidence 



























































   106...110.... .....120.........130.........140.........150.........160....
 
   180.........190.........200.........210.........220.........230 .......
Predicted Secondary structure 




































..






Query SS confidence 


















































. .






Query Sequence  LFRGNRTTKVDARRFAAFCSPNLPPLATVGADVTINRELVRKACGKSHLVV. . HSSMEPD
Query Conservation 
       
  
    

 

    

                        ..       
Alig confidence 





















.



























..






Template Conservation 
  
    
  
   


 
  . 


                               
 
Template Sequence  IQSGRDVSKSINIKTEAFKSAW. GPLGMVVEGKSYWFRLPAKRHTVNSEFDIKQISSLPQ
Template Known Secondary structure  TTT

SSSSTT

TT.

STT




S

GGG
S

GGG
S



Template Predicted Secondary structure 














.



























Template SS confidence 



























































   165....170.........180...... ...190.........200.........210.........220...
 
   238.240.........250.........260.........270.........280.........290.......
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  VGLLRLYPGIPASLVRTFLQPPLKGVVMETFGSGNGPTKPDLLQELRVAAEQGLIIVNCT
Query Conservation 
      

               



   
 

 
        
  
   

 

  
Alig confidence 




































..




















Template Conservation 
 

   

               



 
 
 
  
..      
  
   

 

  
Template Sequence  VDIAYSYGNVTDTAYKALAQNGAKALIHAGTGNGSVS. . SRVVPALQQLRKNGTQIIRSS
Template Known Secondary structure 

TT

STT
SBTTTB

..TTTTT
Template Predicted Secondary structure 














..


Template SS confidence 



























































   224.....230.........240.........250.........260 .........270.........280.
 
   298.300..... ....310.........320.........330.........340.........350....
Predicted Secondary structure 







.





















Query SS confidence 







.
















































Query Sequence  HCLQGAVT. SDYASGMAMAGAGIVSGFDMTSEAALAKLSYVLGQPGLSLNDRKKLLAK
Query Conservation 

  
 
 .  
  
  
   


   


 


  

  

         
      
Alig confidence 







.





..


























.












Template Conservation 

  
          ..    
 
    

 
 
  

   
  .     

   
  
Template Sequence  HVNQGGFVLRNAEQP. . DDKNDWVVAHDLNPEKARILAMVAMTK. TQDSKELQRIFWE
Template Known Secondary structure  S

SS



TTTSS
..T

TT

TTT.


Template Predicted Secondary structure 














..







.


Template SS confidence 

























































   282.......290...... ...300.........310.........320... ......330......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D