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Job DescriptionA0JNU3
Confidence99.77%DateWed Jul 10 14:11:33 BST 2013
Rank64Aligned Residues143
% Identity21%Templatec3lvrE_
PDB info PDB header:protein transportChain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
Resolution3.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410.........420....... ..430.........440... ......
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Query Sequence  PGLALAAAHAGDLDTLQAFVELDRDLNLK. . . . . . DYSGQTPLHVAARRGH. . . AAVVTM
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Template Sequence  PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDF
Template Known Secondary structure  T
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   548.550.........560.........570.........580.........590.........600.......
 
   450.........460.........470.........480.........490.........500.........
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Query Sequence  LLQRGADVDARNEDGQSPLLLAVRGRHQSVIGLLRAAGARLSPQELEDVGTELCRLASRG
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Template Sequence  IIQNGGHLDAKA. DGNTALHYAALYNQPDCLKLLLKGRALVGTVN. EAGETALDIARKKH
Template Known Secondary structure  T

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   608.610......... 620.........630.........640.........650. ........660.....
 
   510.........520....... ..530.........540...
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Query Sequence  DSEGLRAWWQAGADLGQP. . . . . . DYDGHCALQVAEAAGN
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Template Sequence  HKECEELLEQAQANKEMRILMLGLDAAGKTTILYKLKLGQ
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   667..670.........680.........690.........700......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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