Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence34.21%DateWed Jul 10 14:11:33 BST 2013
Rank217Aligned Residues120
% Identity13%Templatec2deoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250...... ...260.........270.. .......280......
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Query Sequence  EPDVGLLRLYPGIPASLVRTFL. . . . . . . QPPLKGVVMETFGSGN. GPTKPDLLQELRVA
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Template Sequence  KNIVYVAQIKGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRADAXXNIVQRIQQS
Template Known Secondary structure 
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TT
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   21........30.........40.........50.........60.........70.........80
 
   287..290...... ...300.........310.........320.........330.........340....
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Query Sequence  AEQGLIIVNC. . THCLQGAVTSDYASGMAMAGAGIVSGFDMTSEAALAKLSYVLGQPGLS
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Template Sequence  KIPVIIYVYPPGASAASAGTYIALGSHLIAXAPGTSI. GACRTNYFIAYIKSLAQESGRN
Template Known Secondary structure  SS

STT
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   81........90.........100.........110....... ..120.........130.........
 
   345....350.....
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Query Sequence  LNDRKKLLAKD
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Template Sequence  ATIAEEFITKD
Template Known Secondary structure  TT
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   158.160........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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