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Job DescriptionA0JNU3
Confidence99.87%DateWed Jul 10 14:11:33 BST 2013
Rank36Aligned Residues159
% Identity16%Templatec3t8kB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   402.......410.........420..... ....430.........440.........450........
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Query Sequence  ALAAAHAGDLDTLQAFVELDRDLN. . . LKDYSGQTPLHVAARRGHAAVVTMLLQRGADVD
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Template Sequence  VSAAAXLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISXFLINKGADIK
Template Known Secondary structure  S
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   7..10.........20.........30.........40.........50.........60......
 
   459460.........470...... ...480.........490.........500.........510
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Query Sequence  ARNEDGQSPLLLAVRGRH. . . . . . QSVIGLLRAAGARLSPQELEDVGTELCRLASRGD. .
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Template Sequence  SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALY. KPYKIVVFKNIFNYFVD
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TT


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SSS.TTTTTTGGGGG

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   67..70.........80.........90.........100........ .110.........120.....
 
   511........520.........530.........540.........550.........560.
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Query Sequence  . . . . . SEGLRAWWQAGADLGQPDYDGHCALQVAEAAGNADVVALLQSFKDSVCAQP
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Template Sequence  ENEXIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKXXEDYIKKYNLKE
Template Known Secondary structure  GGGGTSTT


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   126...130.........140.........150.........160.........170.........180.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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