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Job DescriptionA0JNU3
Confidence100.00%DateWed Jul 10 14:11:33 BST 2013
Rank10Aligned Residues315
% Identity23%Templatec2wltA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:l-asparaginase; PDBTitle: the crystal structure of helicobacter pylori l-asparaginase2 at 1.4 a resolution
Resolution1.40 Å
Model Dimensions (Å)X:64.671 Y:54.835 Z:39.244

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20........ .30.........40.........50.........60......
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Query Sequence  RRLLAIYTGGTIGMRSEGGV. . LVPGRGLAAVLKTLHMFHDEEYAQAHSLPEDTLVLPPA
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Template Sequence  PTIALLATGGTIAGSGASLGSYKSGELGVKELLKAIPSLNKIARIQGEQVSN. . . . . . . .
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SGGG
B

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BTT
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   6...10.........20.........30.........40.........50.......
 
   67..70.........80.........90.........100...... ...110.........120....
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Query Sequence  SPDQRIIYTVLECQPLFDSSDMTITEWVQIAQTIERHYAQ. . YQGFVVIHGTDTMAFAAS
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Template Sequence  . . . . . . . . . . . . . . . . IGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAY
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GGG

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   60.........70.........80.........90.........100...
 
   125....130.........140.........150.........160......... 170.........180..
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Query Sequence  VLSFMLENLQKPVVLTGAQVPIHALWSDGRENLLGALLMAGQYVI. . PEVCLFFQNQLFR
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Template Sequence  FLNLVLHS. TKPVVLVGAMRNASSLSADGALNLYEAVSVAVNEKSANKGVLVVMDDTIFS
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.SS


SS
TTSTT
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GGGTTS
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   104.....110. ........120.........130.........140.........150.........160..
 
   183......190.........200.........210.........220.........230...... ...
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Query Sequence  GNRTTKVDARRFAAFCSPNLPPLATVGADVTINRELVRKACGKSHLVVHSSMEP. . . DVG
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Template Sequence  VREVVKTHTTHVSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVD
Template Known Secondary structure  TTT

SSS
TT

TTT

STT




S

GGG
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GGG

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   163......170.........180.........190.........200.........210.........220..
 
   240.........250.........260.........270.........280.........290.........
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Query Sequence  LLRLYPGIPASLVRTFLQPPLKGVVMETFGSGNGPTKPDLLQELRVAAEQGLIIVNCTHC
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Template Sequence  IIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGNVS. . AGFLKAMQEASQMGVVIVRSSRV
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TT

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   223......230.........240.........250....... ..260.........270.........280
 
   300.........310.........320.........330.........340.........350....
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Query Sequence  LQGAVTSDYASGMAMAGAGIVSGFDMTSEAALAKLSYVLGQPGLSLNDRKKLLAK
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Template Sequence  GSGGV. . . TSGEIDDKAYGFITSDNLNPQKARVLLQLALTK. TNDKAKIQEMFEE
Template Known Secondary structure  SSS

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   281.... ....290.........300.........310........ .320.........330.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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