Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence31.89%DateWed Jul 10 14:11:33 BST 2013
Rank229Aligned Residues109
% Identity16%Templatec1xuzA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210.........220.........230.........240.
Predicted Secondary structure 











































Query SS confidence 



























































Query Sequence  RGNRTTKVDARRFAAFCSPNLPPLATVGADVTINRELVRKACGKSHLVVHSSMEPDVGLL
Query Conservation        
  
    

 

    

                               
   
Alig confidence 



























































Template Conservation 









                              

  
    
       

 
Template Sequence  AGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMI
Template Known Secondary structure  T
S



GGGGG


TT
SS



TT
Template Predicted Secondary structure 

























Template SS confidence 



























































   47..50.........60.........70.........80.........90.........100......
 
   242.......250.........260.........270.........280.........290.......
Predicted Secondary structure 























Query SS confidence 























































Query Sequence  RLYPGIPASLVRTFLQPPLKGVVMETFGSGNGPTKPDLLQELRVAAEQGLIIVNCT
Query Conservation     

               



   
 

 
        
  
   

 

  
Alig confidence 
































.......















Template Conservation 
 




  


 
    
   



 
  
 
.......

  

  







Template Sequence  FISTPFSRAAALRLQRMDIPAYKIGSGECNNYP. . . . . . . LIKLVASFGKPIILST
Template Known Secondary structure 
ST
S

GGGTT
.......TT
S

Template Predicted Secondary structure 









.......




Template SS confidence 























































   107..110.........120.........130......... 140.........150.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D