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Job DescriptionA0JNU3
Confidence99.80%DateWed Jul 10 14:11:33 BST 2013
Rank59Aligned Residues109
% Identity31%Templatec3deoA_
PDB info PDB header:protein transport, membrane proteinChain: A: PDB Molecule:signal recognition particle 43 kda protein; PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   431........440.........450.........460.........470.........480.........490
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Query Sequence  GQTPLHVAARRGHAAVVTMLLQRGADVDARNEDGQSPLLLAVRGRHQSVIGLLRAAGARL
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Template Sequence  YETPWWTAARKADEQALSQLLE. DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL
Template Known Secondary structure  TT
TT.TS
TT


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TT

T
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   128.130.........140......... 150.........160.........170.........180......
 
   491........500.........510.........520.........530.........540
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Query Sequence  SPQELEDVGTELCRLASRGDSEGLRAWWQAGADLGQPDYDGHCALQVAEA
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Template Sequence  DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE
Template Known Secondary structure  T


SSSS

TT
T

TT


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   187..190.........200.........210.........220.........230......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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