Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence99.74%DateWed Jul 10 14:11:33 BST 2013
Rank71Aligned Residues157
% Identity25%Templatec3v30A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:dna-binding protein rfxank; PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
Resolution1.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420... ......430.........440.........450.........
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Query Sequence  LALAAAHAGDLDTLQAFVELDRD. LNLKDYSGQTPLHVAARRGHAAVVTMLLQRGADVDA
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Template Sequence  SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI
Template Known Secondary structure 
TT
TT
SGGGG


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TT
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TT
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   93......100.........110.........120.........130.........140.........150..
 
   460.........470.........480.........490.........500.........510.........
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Query Sequence  RNEDGQSPLLLAVRGRHQSVIGLLRAAGARLSPQELEDVGTELCRLASRGDSEGLRAWWQ
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Template Sequence  LAKERESALSLASTGGYTDIVGLLLER. DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA
Template Known Secondary structure 

TT


TT
TT.T

TT


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TT
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   153......160.........170......... 180.........190.........200.........210.
 
   520.........530.........540.........550........
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Query Sequence  AGADLGQPDYDGHCALQVAEAAGNADVVALLQSFKDSVC
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Template Sequence  RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF
Template Known Secondary structure  TT

TT


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   212.......220.........230.........240.........250
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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