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Job DescriptionA0JNU3
Confidence99.89%DateWed Jul 10 14:11:33 BST 2013
Rank27Aligned Residues167
% Identity22%Templatec3ljnA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein; PDBTitle: ankyrin repeat protein from leishmania major
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   395....400.........410.........420.........430.........440.........450....
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Query Sequence  DVLLPGLALAAAHAGDLDTLQAFVELDRDLNLKDYSGQTPLHVAARRGHAAVVTMLLQRG
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Template Sequence  DDENXEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG
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T
TT

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TT





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   13......20.........30.........40.........50.........60.........70..
 
   455....460.........470.........480........
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Query Sequence  ADVDARNEDGQSPLLLAVRGRHQSVIGLLRAAGA. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EVHSL. . WHGQKPIHLAVXANKTDLVVALVEGAKERGQXPESLLNECDEREVNEIGSHVK
Template Known Secondary structure 




..BTTB
TT
T

T





TT
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   73.... ..80.........90.........100.........110.........120.........130
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HCKGQTALHWCVGLGPEYLEXIKILVQLGASPTAKDKADETPLXRAXEFRNREALDLXXD
Template Known Secondary structure  S


S
GGGT

TT


TTS

TT
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   131........140.........150.........160.........170.........180.........190
 
   489490.........500.........510.........520.........530.........540.
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Query Sequence  . . . . . . . RLSPQELEDVGTELCRLASRGDSEGLRAWWQAGADLGQPDYDGHCALQVAEAA
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Template Conservation                                     
             
 
 
  
   
Template Sequence  TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNEHTVPLYLSVRA
Template Known Secondary structure 
S
SSS

TT


TT


TTTTT
TTT

TT


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T
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   191........200.........210.........220.........230.........240.........250
 
   542.......550.........560...
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Query Sequence  GNADVVALLQSFKDSVCAQPQP
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Template Sequence  AXVLLTKELLQKTDVFLIQACP
Template Known Secondary structure 

S
T
T
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   251........260.........270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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