Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence42.71%DateWed Jul 10 14:11:33 BST 2013
Rank176Aligned Residues59
% Identity15%Templatec3ot1B_
PDB info PDB header:structural genomicsChain: B: PDB Molecule:4-methyl-5(b-hydroxyethyl)-thiazole monophosphate PDBTitle: crystal structure of vc2308 protein
Resolution1.16 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260........ .270.........280.........290.........300.........310.....
Predicted Secondary structure 





..






















Query SS confidence 










. .














































Query Sequence  PPLKGVVMETF. . GSGNGPTKPDLLQELRVAAEQGLIIVNCTHCLQGAVTSDYASGMAMA
Query Conservation      



   ..
 

 
        
  
   

 

  


  
 
   
  
  
 
Alig confidence 










..




























...........






Template Conservation     
 





            
   
         
 


........... 
   

Template Sequence  EAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAIA. . . . . . . . . . . TPALVFA
Template Known Secondary structure  GG
S


T
TT


...........TTT
Template Predicted Secondary structure 















...........
Template SS confidence 



























































   67..70.........80.........90.........100........ .110.....
 
   316...320.......
Predicted Secondary structure 










Query SS confidence 











Query Sequence  GAGIVSGFDMTS
Query Conservation    


   


 
Alig confidence 











Template Conservation   



 
   
 
Template Sequence  KQQKFVGARXTC
Template Known Secondary structure  TTT
STT

B

Template Predicted Secondary structure 










Template SS confidence 











   117..120........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D