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Job DescriptionA0JNU3
Confidence99.91%DateWed Jul 10 14:11:33 BST 2013
Rank23Aligned Residues151
% Identity26%Templatec4g8kA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:2-5a-dependent ribonuclease; PDBTitle: intact sensor domain of human rnase l in the inactive signaling state
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.........430 .........440.........450........
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Query Sequence  GLALAAAHAGDLDTLQAFVELDRDLNLKDYS. GQTPLHVAARRGHAAVVTMLLQRGADVD
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Template Sequence  HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV
Template Known Secondary structure  TT
T

TT


TTT


TT
TT

TT
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   27..30.........40.........50.........60.........70.........80......
 
   459460.........470.........480
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Query Sequence  ARNEDGQSPLLLAVRGRHQSVI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK
Template Known Secondary structure 


TT


T
TTT

TT
B
TT

BTT
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   87..90.........100.........110.........120.........130.........140......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RGANVNLRRKTKLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL
Template Known Secondary structure  TT

TT






TT
S

T
S


TT


TTS

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   147..150.........160.........170.........180.........190.........200......
 
   481........490......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLLRAAGARLSPQELE
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Template Sequence  SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS
Template Known Secondary structure  S
TTTTT

TT


GGG

TT
TSTT

TT
B
T
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   212.......220.........230.........240.........250.........260.........270.
 
   497..500.........510.........520.........530.........540.........550.....
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Query Sequence  DVGTELCRLASRGDSEGLRAWWQAGADLGQPDYDGHCALQVAEAAGNADVVALLQSFKD
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Template Sequence  DGKTALLLAVELKLKKIAELLCKRGASTD. . . . . CGDLVMTARRNYDHSLVKVLLSHGA
Template Known Secondary structure  TS
BTT
TTS
SST.....T

TT
TT
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   272.......280.........290.........300 .........310.........320.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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