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Job DescriptionA0JNU3
Confidence99.88%DateWed Jul 10 14:11:33 BST 2013
Rank31Aligned Residues158
% Identity27%Templatec3eu9B_
PDB info PDB header:protein binding, methyl-lysine-binding pChain: B: PDB Molecule:huntingtin-interacting protein 14; PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410.........420.........430.........440.........450....
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Query Sequence  DVLLPGLALAAAHAGDLDTLQAFVELDRDLNLKDYSGQTPLHVAARRGHAAVVTMLLQRG
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Template Sequence  DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG
Template Known Secondary structure 

GGG

TT
TT

TT


TTS

TT
TT
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   54.....60.........70.........80.........90.........100.........110...
 
   455.... 460.........470.........480
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Query Sequence  ADVDA. RNEDGQSPLLLAVRGRHQSVI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIV
Template Known Secondary structure 

TT

BTTTTB
T
TTT

TT


TTS

TT
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   114.....120.........130.........140.........150.........160.........170...
 
   481........490.........500......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLLRAAGARLSPQELEDVGTELCRLA
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Template Sequence  AYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAV
Template Known Secondary structure  T

TT


TTS



SSTTTT

TT
B
SSS

B
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   174.....180.........190.........200.........210.........220.........230...
 
   507..510.........520.........530.........540.........550..
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Query Sequence  SRGDSEGLRAWWQAGADLGQPDYDGHCALQVAEAAGNADVVALLQS
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Template Sequence  LAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQE
Template Known Secondary structure  TT
TT

SS


TTS

ST

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   234.....240.........250.........260.........270.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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