Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence21.00%DateWed Jul 10 14:11:33 BST 2013
Rank313Aligned Residues86
% Identity21%Templated1ur4a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100...... ...110.... ...
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Query Sequence  RIIYTVLECQPLFDSSDMTITEWVQIAQTIERHYAQ. . . . . YQGFVVIH. . . GTD. . . . .
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Template Sequence  GIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYA
Template Known Secondary structure  T

SSS
SS
BTTB


TTS

TTSTT
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   154.....160.........170.........180.........190.........200.........210...
 
   118.120.........130.........140.........150.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . TMAFAASVLSFMLENLQKPVVLTGAQVPIHALWS
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Template Sequence  WIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDG
Template Known Secondary structure  TT


S
TTTS






S
S

S
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   214.....220.........230.........240.........250.........260.........270...
 
   152....
Predicted Secondary structure 
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Query Sequence  DGREN
Query Conservation 

  
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Template Conservation 
   
Template Sequence  DGHGN
Template Known Secondary structure  SSS

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   274....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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