Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence31.54%DateWed Jul 10 14:11:33 BST 2013
Rank233Aligned Residues16
% Identity19%Templatec2kgfA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:capsid protein p27; PDBTitle: n-terminal domain of capsid protein from the mason-pfizer2 monkey virus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100
Predicted Secondary structure 


Query SS confidence 















Query Sequence  SSDMTITEWVQIAQTI
Query Conservation 
       
  

  
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Template Conservation     
 
 

  



 
Template Sequence  DNWLTPTDWNTLVRAV
Template Known Secondary structure  TSB

Template Predicted Secondary structure 




Template SS confidence 















   50.........60.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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