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Job DescriptionA0JNU3
Confidence99.87%DateWed Jul 10 14:11:33 BST 2013
Rank34Aligned Residues160
% Identity24%Templatec2xaiD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:ankyrin repeat and socs box protein 9; PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410.........420.........430.........440.........450........
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Query Sequence  PGLALAAAHAGDLDTLQAFVELDRDLNLKDYSGQTPLHVAARRGHAAVVTMLLQRGADVD
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Template Sequence  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN
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T
TT

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TT


T
TT

TT
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   37..40.........50.........60.........70.........80.........90......
 
   459460.........470.........480........
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Query Sequence  ARNEDGQSPLLLAVRGRHQSVIGLLRAAGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAY
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T
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S
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T
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   97..100.........110.........120.........130.........140.........150......
 
   489490.........500.........510.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RLSPQELEDVGTELCRLASRGDSEGLR
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Template Sequence  GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELAC
Template Known Secondary structure  T

TT

BTTTB
TT
T

TT

BTTB
T
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   157..160.........170.........180.........190.........200.........210......
 
   516...520.........530.........540.........550.........560
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Query Sequence  AWWQAGADLGQPDYDGHCALQVAEAAGNADVVALLQSFKDSVCAQ
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Template Sequence  LLMDFGADTQAKNAEGKRPVELVPPES. . PLAQLFLEREGPPSLM
Template Known Secondary structure  TT

TT


TTS

GGGGS
TT
..GGG
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   217..220.........230.........240... ......250.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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