Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence20.16%DateWed Jul 10 14:11:33 BST 2013
Rank321Aligned Residues48
% Identity15%Templated8abpa_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution1.49

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   250.........260.........270.........280.........290.........300...
Predicted Secondary structure 
























Query SS confidence 





















































Query Sequence  SLVRTFLQPPLKGVVMETFGSGNGPTKPDLLQELRVAAEQGLIIVNCTHCLQGA
Query Conservation              



   
 

 
        
  
   

 

  


  
 
Alig confidence 
























......






















Template Conservation    
   
    




         ......          
 

         
Template Sequence  NAIDSLAASGAKGFVICTPDPKLGS. . . . . . AIVAKARGYDMKVIAVDDQFVNA
Template Known Secondary structure  TT


S
GGG......TT
SS

B
T
Template Predicted Secondary structure 








......










Template SS confidence 





















































   48.50.........60.........70.. .......80.........90.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D