 |
Job Description | A0JNU3 | Confidence | 22.00% | Date | Wed Jul 10 14:11:33 BST 2013 |
Rank | 297 | Aligned Residues | 73 |
% Identity | 18% | Template | c4hy3D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:phosphoglycerate oxidoreductase; |
PDBTitle: crystal structure of a phosphoglycerate oxidoreductase from rhizobium2 etli
|
Resolution | 2.80 Å |
|
 |
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | C | G | K | S | H | L | V | V | H | S | S | M | E | P | D | V | G | L | L | R | L | Y | P | G | I | P | A | S | L | V | R | T | F | L | Q | P | P | L | K | G | V | V | . |
M | E | T | F | G | S | G | N | G | P | T | K | P | D | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
| . |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   | . | . |
|   |
|
|   |
|   |   |   |   |
|   |
|   |
|   |
|
| . | . | . | . | . | . |
Template Sequence |   |
A | D | P | E | N | I | A | G | L | G | D | D | I | L | G | R | A | R | Y | I | I | G | Q | P | P | L | S | A | E | T | L | A | R | X | . |
. |
P | A | L | R | S | I | L | N | V | E | S | N | L | L | N | N | X | P | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
| G | G | G | G | G | G | S |
|  |  |  |  | T | T |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | T |
| . | . | T | T |
|
|  |  |  |  |
| S | S | S |
|
| S |
| S |
| . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
  |
  |   |
281 | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | L | R | V | A | A | E | Q | G | L | I | I | V | N | C | T | H | C | L | Q | G | A | V |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|
|   |   |
|   |
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |   |
|   |   |
|
Template Sequence |   |
. |
. |
Y | E | V | L | F | Q | R | G | I | H | V | V | T | T | G | Q | V | F | A | E | P | V |
Template Known Secondary structure |   |
. | . | T | T |  |  |  |  | T |
|
|  |  |  |  |
| G | G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|