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Job DescriptionA0JNU3
Confidence26.25%DateWed Jul 10 14:11:33 BST 2013
Rank258Aligned Residues148
% Identity12%Templatec4g25A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:pentatricopeptide repeat-containing protein at2g32230, PDBTitle: crystal structure of proteinaceous rnase p 1 (prorp1) from a.2 thaliana, semet substituted form with sr
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410.. .......420.........430.........440...
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Query Sequence  LPGLALAAAHAGDLD. . . . TLQAFVELDRDLNLKDYSGQTPLHVAARRGH. . . . . . . . . .
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Template Sequence  LKQKLDXCSKKGDVLEALRLYDEARRNGVQLSQ. . . YHYNVLLYVCSLAEAATESSPNPG
Template Known Secondary structure  TTTT

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   100.........110.........120.........130.. .......140.........150......
 
   444.....450.........460.........470.........480.........490.........
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Query Sequence  . . . . AAVVTMLLQRGADVDARNEDGQSPLLLAVRGRHQSVIGLLRAAGARLSPQELEDVG
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Template Sequence  LSRGFDIFKQXIVDKVVPNEATFT. . NGARLAVAKDDPEXAFDXVKQXKAFGIQPRLRSY
Template Known Secondary structure  TT



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   157..160.........170.........180 .........190.........200.........210....
 
   500....... ..510.. .......520.........530.........540.........550..
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Query Sequence  TELCRLAS. RGDSE. . . . GLRAWWQAGADLGQPDYDGHCALQVAEAAGNADVVALLQS
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Template Sequence  GPALFGFCRKGDADKAYEVDAHXVESEVVPEE. . PELAALLKVSXDTKNADKVYKTLQ
Template Known Secondary structure  TT
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   215....220.........230.........240...... ...250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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