Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence29.69%DateWed Jul 10 14:11:33 BST 2013
Rank246Aligned Residues84
% Identity20%Templatec3ufxG_
PDB info PDB header:ligaseChain: G: PDB Molecule:succinyl-coa synthetase beta subunit; PDBTitle: thermus aquaticus succinyl-coa synthetase in complex with gdp-mn2+
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20...... ...30.........40.........50.........60..
Predicted Secondary structure 














....













Query SS confidence 



















. . . .



































Query Sequence  PERRLLAIYTGGTIGMRSEG. . . . GVLVPGRGLAAVLKTLHMFHDEEYAQAHSLPEDTLV
Query Conservation     




 




      .... 
  
       
   
                   
Alig confidence 



















....







............................
Template Conservation    
 
    

 
      
     
   

 ............................
Template Sequence  LDGNIGIIGNGAGLVMYTLDLVNRVGGKPANF. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SSSSSTT

BS............................
Template Predicted Secondary structure 














............................
Template SS confidence 



























































   246...250.........260.........270.......
 
   63......70.........80.... .....90.........100.........110.. .......
Predicted Secondary structure 
















.






.




.
Query SS confidence 





















.



























.






.
Query Sequence  LPPASPDQRIIYTVLECQPLFD. SSDMTITEWVQIAQTIERHYAQYQGFVV. IHGTDTM.
Query Conservation   
             
    

.
       
  

  
       

 

. 





.
Alig confidence  ....................

.


















.







.






.
Template Conservation  .................... 

 
 
  
    

     
.  
  


     
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . LDIGGGAKADVVYNALKVVLKD. PDVKGVFINIFGGITRA
Template Known Secondary structure  ....................

S


T
.TT

S
Template Predicted Secondary structure  ....................






.










Template SS confidence 



























































   278.280.........290......... 300.........310......
 
   120.........130.... .....
Predicted Secondary structure 



..

Query SS confidence 














. .




Query Sequence  AFAASVLSFMLENLQ. . KPVVL
Query Conservation    

  

  
    ..




Alig confidence 














..




Template Conservation    

  

          

  
Template Sequence  DEVAKGVIRALEEGLLTKPVVM
Template Known Secondary structure  TT


S
Template Predicted Secondary structure 




Template SS confidence 





















   317..320.........330........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D