Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence99.82%DateWed Jul 10 14:11:33 BST 2013
Rank55Aligned Residues130
% Identity26%Templatec1ympA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   420.........430.........440.........450.........460.........470.........
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Query Sequence  LDRDLNLKDYSGQTPLHVAARRGHAAVVTMLLQRGADVDARNEDGQSPLLLAVRGRHQSV
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Template Sequence  RATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDA
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GGG




TT


T
TTTT

TT


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TT
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   107..110.........120.........130.........140.........150.........160......
 
   480.........490.........500.........510.........520.........530.........
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Query Sequence  IGLLRAAGARLSPQELEDVGTELCRLASRGDSEGLRAWWQAGADLGQPDYDGHCALQVAE
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Template Sequence  AVVLLKNGANKDMQN. NKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ
Template Known Secondary structure  TT

TT


.TT


T
TT

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TT


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   167..170.........180. ........190.........200.........210.........220.....
 
   540.........550
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Query Sequence  AAGNADVVALL
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Template Sequence  ERMHHDIVRLL
Template Known Secondary structure  TT
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   226...230......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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