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Job DescriptionA0JNU3
Confidence99.85%DateWed Jul 10 14:11:33 BST 2013
Rank43Aligned Residues122
% Identity29%Templatec3ui2A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic; PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
Resolution3.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   431........440.........450.........460.........470.........480.........490
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Query Sequence  GQTPLHVAARRGHAAVVTMLLQRGADVDARNEDGQSPLLLAVRGRHQSVIGLLRAAGARL
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Template Sequence  YETPWWTAARKADEQALSQLLED. RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL
Template Known Secondary structure  TTT
TTTT.

TT
B
TTS
BT
TT

T
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   128.130.........140.........150 .........160.........170.........180......
 
   491........500.........510.........520.........530.........540.........550
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Query Sequence  SPQELEDVGTELCRLASRGDSEGLRAWWQAGADLGQPDYDGHCALQVAEAAGNADVVALL
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Template Sequence  DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP
Template Known Secondary structure  T


SSS


TT
TT

TT


TT


TT


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   187..190.........200.........210.........220.........230.........240......
 
   551..
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Query Sequence  QSF
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Template Sequence  MQF
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   247..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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