Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence42.10%DateWed Jul 10 14:11:33 BST 2013
Rank178Aligned Residues89
% Identity9%Templatec3lloA_
PDB info PDB header:motor proteinChain: A: PDB Molecule:prestin; PDBTitle: crystal structure of the stas domain of motor protein prestin (anion2 transporter slc26a5)
Resolution1.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200.........210.........220.........230.........240.........250........
Predicted Secondary structure 




































Query SS confidence 



























































Query Sequence  SPNLPPLATVGADVTINRELVRKACGKSHLVVHSSMEPDVGLLRLYPGIPASLVRTFLQP
Query Conservation 

    

                               
      

            
Alig confidence 














..












.......






















Template Conservation   
    

 

 
  ..             .......


 
 
  
 
 
 
   
   
Template Sequence  SPSYTVLGQLPDTDV. . YIDIDAYEEVKEI. . . . . . . PGIKIFQINAPIYYANSDLYSSA
Template Known Secondary structure 

S
TTSS
..TTTSTT
B

.......TT
S

Template Predicted Secondary structure 







..






.......







Template SS confidence 



























































   505....510......... 520.........530.. .......540.........550.....
 
   259260.........270...... ...280.........290......
Predicted Secondary structure 












..


Query SS confidence 

















. .



















Query Sequence  PLKGVVMETFGSGNGPTK. . PDLLQELRVAAEQGLIIVNC
Query Conservation     



   
 

 
  ..      
  
   

 

  
Alig confidence 

















..



















Template Conservation      



 
 
  




   
  
   
   
  
 
 
Template Sequence  NIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLA
Template Known Secondary structure 

S
TT




TTT
Template Predicted Secondary structure 










Template SS confidence 







































   638.640.........650.........660.........670.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D