Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNU3
Confidence46.58%DateWed Jul 10 14:11:33 BST 2013
Rank163Aligned Residues136
% Identity13%Templatec3opyG_
PDB info PDB header:transferaseChain: G: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.. .......30.........40 .........50
Predicted Secondary structure 











.............











..
Query SS confidence 
















. . . . . . . . . . . . .

















. .









Query Sequence  GPERRLLAIYTGGTIGM. . . . . . . . . . . . . RSEGGVLVPGRGLAAVLK. . TLHMFHDEEY
Query Conservation      




 




  .............     
  
       
 ..  
       
Alig confidence 
















.............

















..









Template Conservation 
  




















 
  
   
 

 

  

 

     
  
    
Template Sequence  SSRLNIAIIHVGAPTSALNPATRVATLNSLAKGHRVFAIRNGFAGLIRHGAVRELNWIDV
Template Known Secondary structure  GG

SS

TTTT
TT


TTTT
Template Predicted Secondary structure 





















Template SS confidence 



























































   596...600.........610.........620.........630.........640.........650.....
 
   51........60.........70.........80.........90.........100.........110
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  AQAHSLPEDTLVLPPASPDQRIIYTVLECQPLFDSSDMTITEWVQIAQTIERHYAQYQGF
Query Conservation               
             
    


       
  

  
       

 
Alig confidence 












.....................

















..





Template Conservation    
   






.....................

  
      
   
  ..  

 
Template Sequence  EDWHNTGGSEIGT. . . . . . . . . . . . . . . . . . . . . NRSLPSDDMGTVAYYFQQ. . YKFDGL
Template Known Secondary structure  TTTTT

S
SS

.....................B


GGGG..T
S
Template Predicted Secondary structure 



.....................




..



Template SS confidence 



























































   656...660........ .670.........680...... ...690..
 
   111........120......... 130.........140.........150.........160.....
Predicted Secondary structure 




...

















Query SS confidence 


















. . .



































Query Sequence  VVIHGTDTMAFAASVLSFM. . . LENLQKPVVLTGAQVPIHALWSDGRENLLGALLMAG
Query Conservation 

 





  

  

  ...
    







  
     


  

  
   
 
Alig confidence 









.







...



































Template Conservation 







  . 
  
 
         













 


 








 
 
Template Sequence  IIIGGFEAFT. ALYELDAARAQYPIFNIPMCCLPATVSNNVPGTEYSLGSDTCLNTLS
Template Known Secondary structure  S.TTT
GGG
S
B
SS


TT
S

BT
Template Predicted Secondary structure 

.
























Template SS confidence 

























































   693......700.. .......710.........720.........730.........740.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D