Email l.a.kelley@imperial.ac.uk Description Q5F267 Date Wed Jul 10 14:18:19 BST 2013 Unique Job ID c7eba2d3692eca70

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2ok5a4 77.9 46 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 2 d1k3ra2 74.8 42 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:Hypothetical protein MTH1 (MT0001), dimerisation domain 3 c1k3rA_ 58.6 44 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein mt0001; PDBTitle: crystal structure of the methyltransferase with a knot from2 methanobacterium thermoautotrophicum 4 d1b93a_ 56.5 18 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 5 d1vmda_ 26.6 13 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 6 c2fwtA_ 23.9 21 PDB header:electron transport Chain: A: PDB Molecule:dhc, diheme cytochrome c; PDBTitle: crystal structure of dhc purified from rhodobacter2 sphaeroides 7 c4a8xB_ 23.2 30 PDB header:transcription Chain: B: PDB Molecule:hook-like, isoform a; PDBTitle: structure of the core asap complex 8 c3eopB_ 22.4 50 PDB header:unknown function Chain: B: PDB Molecule:thymocyte nuclear protein 1; PDBTitle: crystal structure of the duf55 domain of human thymocyte nuclear2 protein 1 9 d2gbsa1 20.4 40 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 10 d1zcea1 19.0 40 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 11 d2g2xa1 18.8 40 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 12 d2ar1a1 18.2 30 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 13 d2evea1 17.4 40 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 14 d2dkya1 16.6 33 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 15 c3u99A_ 15.9 18 PDB header:electron transport Chain: A: PDB Molecule:diheme cytochrome c; PDBTitle: the experimental x-ray structure of the new diheme cytochrome type c2 from shewanella baltica os155 sb-dhc 16 d1y5ia1 14.4 40 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 17 c2k8qA_ 12.4 29 PDB header:structural protein Chain: A: PDB Molecule:protein shq1; PDBTitle: nmr structure of shq1p n-terminal domain 18 c3eudE_ 12.2 28 PDB header:nuclear protein Chain: E: PDB Molecule:protein shq1; PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p 19 d1w4ma_ 11.4 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain 20 c2jy0A_ 11.0 55 PDB header:membrane protein, viral protein Chain: A: PDB Molecule:protease ns2-3; PDBTitle: solution nmr structure of hcv ns2 protein, membrane segment2 (1-27) 21 c1qcrD_ not modelled 10.9 19 PDB header:oxidoreductase Chain: D: PDB Molecule:ubiquinol cytochrome c oxidoreductase; PDBTitle: crystal structure of bovine mitochondrial cytochrome bc12 complex, alpha carbon atoms only 22 d2h80a1 not modelled 10.8 32 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 23 d2r5fa1 not modelled 9.8 16 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:SorC sugar-binding domain-like 24 c2i6sA_ not modelled 9.5 21 PDB header:hydrolase Chain: A: PDB Molecule:complement c2a fragment; PDBTitle: complement component c2a 25 c3h5jA_ not modelled 9.3 50 PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: leud_1-168 small subunit of isopropylmalate isomerase (rv2987c) from2 mycobacterium tuberculosis 26 c3q3wB_ not modelled 8.8 33 PDB header:transferase Chain: B: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: isopropylmalate isomerase small subunit from campylobacter jejuni. 27 c2hcuA_ not modelled 8.8 50 PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: crystal structure of smu.1381 (or leud) from streptococcus2 mutans 28 d1uhwa_ not modelled 8.8 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain 29 c2ct6A_ not modelled 8.8 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sh3 domain-binding glutamic acid-rich-like PDBTitle: solution structure of the sh3 domain-binding glutamic acid-2 rich-like protein 2 30 c3a0bL_ not modelled 8.4 50 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 31 d1v3fa_ not modelled 8.3 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain 32 d1t0ia_ not modelled 8.2 26 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 33 d1sxra_ not modelled 8.0 15 Fold:N-acetylmuramoyl-L-alanine amidase-like Superfamily:N-acetylmuramoyl-L-alanine amidase-like Family:N-acetylmuramoyl-L-alanine amidase-like 34 c3a0hl_ not modelled 7.8 50 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 35 c3a0hL_ not modelled 7.8 50 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 36 c3a0bl_ not modelled 7.8 50 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 37 d2cu8a2 not modelled 7.7 27 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 38 c3t7hB_ not modelled 7.6 13 PDB header:ligase Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: atg8 transfer from atg7 to atg3: a distinctive e1-e2 architecture and2 mechanism in the autophagy pathway 39 d1wo8a1 not modelled 7.3 14 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 40 c3ju3A_ not modelled 7.2 13 PDB header:oxidoreductase Chain: A: PDB Molecule:probable 2-oxoacid ferredoxin oxidoreductase, alpha chain; PDBTitle: crystal structure of alpha chain of probable 2-oxoacid ferredoxin2 oxidoreductase from thermoplasma acidophilum 41 c3mbfA_ not modelled 7.1 16 PDB header:lyase Chain: A: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: crystal structure of fructose bisphosphate aldolase from2 encephalitozoon cuniculi, bound to fructose 1,6-bisphosphate 42 d1gl0i_ not modelled 6.4 60 Fold:PMP inhibitors Superfamily:PMP inhibitors Family:PMP inhibitors 43 d1xmeb2 not modelled 6.4 33 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 44 d1ixsa_ not modelled 6.2 58 Fold:RuvA C-terminal domain-like Superfamily:DNA helicase RuvA subunit, C-terminal domain Family:DNA helicase RuvA subunit, C-terminal domain 45 d2iv2x1 not modelled 6.1 20 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 46 d1vfsa1 not modelled 5.9 21 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Alanine racemase 47 c1rpqW_ not modelled 5.9 43 PDB header:membrane protein Chain: W: PDB Molecule:peptide e131; PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display 48 c1kcoA_ not modelled 5.9 43 PDB header:protein binding Chain: A: PDB Molecule:e131 zeta peptide; PDBTitle: structure of e131 zeta peptide, a potent antagonist of the2 high-affinity ige receptor 49 c1rpqZ_ not modelled 5.9 43 PDB header:membrane protein Chain: Z: PDB Molecule:peptide e131; PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display 50 c1rpqX_ not modelled 5.9 43 PDB header:membrane protein Chain: X: PDB Molecule:peptide e131; PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display 51 d1g1xc_ not modelled 5.6 50 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Ribosomal protein S18 Family:Ribosomal protein S18 52 c3kl4B_ not modelled 5.6 60 PDB header:hydrolase Chain: B: PDB Molecule:signal peptide of yeast dipeptidyl aminopeptidase b; PDBTitle: recognition of a signal peptide by the signal recognition particle 53 d1ea0a1 not modelled 5.5 27 Fold:Single-stranded right-handed beta-helix Superfamily:Alpha subunit of glutamate synthase, C-terminal domain Family:Alpha subunit of glutamate synthase, C-terminal domain 54 c1rpqY_ not modelled 5.2 43 PDB header:membrane protein Chain: Y: PDB Molecule:peptide e131; PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display