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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank122Aligned Residues258
% Identity38%Templatec2qobA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.. .......270..... ....280.........290
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWK. . . KYSLTVAVKTLKE. . DTMEVEEFLKEAAVM
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM
Template Known Secondary structure  B

GGG
SSS
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TT

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   615....620.........630.........640.........650.........660.........670....
 
   291........300.........310.........320.........330.........340.........350
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Query Sequence  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
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Template Sequence  GQFDHPNIIRLEGVVTKSKPVMIVTEMENGSLDSFLRKH. . DAQFTVIQLVGMLRGIASG
Template Known Secondary structure  TT


TTB


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TT
BTT..TT
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   675....680.........690.........700.........710... ......720.........730..
 
   351........360.........370.........380.........390.........400.........410
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Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL. . . . . . . . . . . KIPIRWTSPEA
Template Known Secondary structure  TT
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GGG
TT




TT

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   734.....740.........750.........760.........770. ........780..
 
   411........420.........430.........440.........450.........460.........470
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Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE
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Template Sequence  IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ
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TTT

TTTT

T



TT
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   796...800.........810.........820.........830.........840.........850.....
 
   471........480.........490.........500......
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Query Sequence  LMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV
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Template Sequence  LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII
Template Known Secondary structure  T
SSGGGS

SGGGGGSB
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   856...860.........870.........880.........890.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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