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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank132Aligned Residues249
% Identity30%Templatec4ithB_
PDB info PDB header:transferase/transferase inhibitorChain: B: PDB Molecule:receptor-interacting serine/threonine-protein kinase 1; PDBTitle: crystal structure of rip1 kinase in complex with necrostatin-1 analog
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250... ......260.........270... ......280.........290........
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Query Sequence  KLGGGQY. . . . . GEVYEGVWKKYSLTVAVKTL. . . KEDTMEVEEFLKEAAVMKEIKHPNL
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Template Sequence  KMKSSDFLESAELKVSLAFHRTQGL. MIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRV
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GGGB
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BTTB
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   11........20.........30..... ....40.........50.........60.........
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN
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Template Sequence  VKLLGVIIEEGKYSLVMEYMEKGNLMHVLKA. . EMSTPLSVKGRIILEIIEGMAYLHGKG
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TT

TT
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   76...80.........90.........100...... ...110.........120.........130...
 
   359360.........370.........380.........390.........400.........410... ...
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Query Sequence  FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY. . NKF
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Template Sequence  VIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNEGTLYYMAPEHLNDVNAKP
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S

SGGG
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GGGTT
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   134.....140.........150.........160.........170.........180.........190...
 
   417..420.........430.........440.. .......450.........460.. .......470..
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Query Sequence  SIKSDVWAFGVLLWEIATYGMSPYPG. IDLSQVYELLEKDYRMERPE. . . GCPEKVYELM
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Template Sequence  TEKSDVYSFAVVLWAIFA. NKEPYENAIAEQQLIMAIKSGNRPDVDDITEYCPREIISLM
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   206...210.........220... ......230.........240.........250.........260....
 
   473......480.........490.........
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Query Sequence  RACWQWNPSDRPSFAEIHQAFETMFQE
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Template Sequence  KLCWEANPEARPTFPGIEEKFRPFYLS
Template Known Secondary structure  T
SSGGGS

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   265....270.........280.........290.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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