Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence99.48%DateWed Jul 10 14:19:35 BST 2013
Rank458Aligned Residues58
% Identity31%Templatec1u3oA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:huntingtin-associated protein-interacting PDBTitle: solution structure of rat kalirin n-terminal sh3 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90... ......100... ......110........
Predicted Secondary structure 
















.




....





Query SS confidence 





























.









. . . .














Query Sequence  NLFVALYDFVASGDNTLSITKGEKLRVLGY. NHNGEWCEAQ. . . . TKNGQGWVPSNYITP
Query Conservation                                .          ....     
  
      
Alig confidence 





























.









....














Template Conservation      




 
    


   

 
 

        
   
         
 

 


  
Template Sequence  ELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTLCI
Template Known Secondary structure 
SS
B


STT


B
TT
SS
TTSSTTSSSSS
GGGS

Template Predicted Secondary structure 

























Template SS confidence 



























































   18.20.........30.........40.........50.........60.........70.......
 
   119120.
Predicted Secondary structure 


Query SS confidence 


Query Sequence  VNS
Query Conservation     
Alig confidence 


Template Conservation    
Template Sequence  SHS
Template Known Secondary structure 


Template Predicted Secondary structure 


Template SS confidence 


   78.80
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D