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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank60Aligned Residues266
% Identity36%Templatec3plsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:macrophage-stimulating protein receptor; PDBTitle: ron in complex with ligand amp-pnp
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240..... ....250.........260...... ...270..... ....280.....
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Query Sequence  DKWEMERTDITMK. . HKLGGGQYGEVYEGVWKKYSL. . . TVAVKTLKE. . DTMEVEEFLK
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Template Sequence  KDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR
Template Known Secondary structure  GGGB

GGGTT
SSS
TT

S
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   1071........1080.........1090.........1100.........1110.........1120.........1130
 
   286...290.........300...... ...310.........320.........330.........340....
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Query Sequence  EAAVMKEIKHPNLVQLLGVCT. REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA
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Template Sequence  EGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS. PQRNPTVKDLISFG
Template Known Secondary structure  T


TTB





SSS




TT
B
.TT


B
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   1131........1140.........1150.........1160.........1170..... ....1180.........
 
   345....350.........360.........370.........380.........390........ .400.
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Query Sequence  TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG. . . AKF
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Template Sequence  LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL
Template Known Secondary structure  TT


S

SGGG
TT



TTSS
TTTTGGGG
S

SS
TT
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   1190.........1200.........1210.........1220.........1230.........1240.........
 
   402.......410.........420.........430.........440.........450.........460.
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Query Sequence  PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP
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Template Sequence  PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP
Template Known Secondary structure  GGGGS
TT



TS

TTTTS
GGGTT





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   1250.........1260.........1270.........1280.........1290.........1300.........
 
   462.......470.........480.........490.........
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Query Sequence  EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE
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Template Sequence  EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA
Template Known Secondary structure  TT

T
SSGGGS

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   1310.........1320.........1330.........1340.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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