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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank315Aligned Residues215
% Identity21%Templatec3rnyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of human rsk1 c-terminal kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290... ......300.........310.......
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Query Sequence  GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI. KHPNLVQLLGVCTREPPFYIITEF
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Template Sequence  CKRCVHNMEYAVKVID. . . . . . . KPSEEIEILLRYGQHPNIITLKDVY. . . . . . DLVTEL
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   432.......440....... ..450.........460.........470.. ......
 
   318.320.........330.........340.........350.........360.........370.......
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Query Sequence  MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV
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Template Sequence  MRGGELLDKILR. . QKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN
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S
BTS..SS


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GGGSSTT

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   492.......500... ......510.........520.........530.........540.........
 
   378.380.........390.........400.........410.........420.........430.......
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Query Sequence  KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM
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Template Sequence  PECLRICDF. . . GFAKQLRAENGLLMTPCYTEVLKRQGYDEGCDIWSLGILLYTMLA. GY
Template Known Secondary structure  GGG


...TT

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GGG

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   550........ .560.........570.........580.........590.........600... ..
 
   438.440.........450.. .......460.........470.........480.........490.
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Query Sequence  SPYPGIDLSQVYELL. . . . . . EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ
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Template Sequence  TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ
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SS
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SGGGGGS
S
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   612.......620.........630.........640.........650.........660.........670.
 
   492
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Query Sequence  A
Query Conservation   
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Template Conservation 
Template Sequence  H
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   672
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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