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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank214Aligned Residues247
% Identity17%Templatec2v62A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250 .........260.........270..... ....280....
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Query Sequence  TMKHKLGG. . . . GQYGEVYEGVWKKYSLTVAVKTLKE. . . . . . . . . . . . . . DTMEVEEFL
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Template Sequence  VLDDMEGNQWVLGKKILIYLAFPTNKPEKDARHVVKVEYQEGPLFSELKFYQRVAKKDCI
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   20.........30.........40.........50.........60.........70.........
 
   285....290.........300.........310 .........320.........330.........340
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Query Sequence  KEAAVMKEIKHPNLVQLLGVCTREPP. . . . FYIITEFMTYGNLLDYLRECNRQEVSAVVL
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Template Sequence  KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL. GIDLQKISGQ. . NGTFKKSTV
Template Known Secondary structure  T
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   87..90.........100.........110.........120.... .....130.... .....140...
 
   341........350.........360.........370... ......380.........390......
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Query Sequence  LYMATQISSAMEYLEKKNFIHRDLAARNCLVGE. . NHLVKVADFGLSRLMTGDTYTAH. .
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Template Sequence  LQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQ
Template Known Secondary structure  TT
S

SGGGSSSTTS


TT
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   144.....150.........160.........170.........180.........190.........200...
 
   397..400.........410.........420.........430.........440.........450..
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Query Sequence  . . . . AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL
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Template Sequence  ENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC. GKLPWEQNLKDPVAVQT
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GGG
S
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TTGGGTT
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   204.....210.........220.........230.........240..... ....250.........260..
 
   453......460 .........470.........480.........490...
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Query Sequence  EKDYRMER. . . . . . . . . . PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF
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Template Sequence  AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL
Template Known Secondary structure  TTTS
TTS

T

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   263......270.........280.........290.........300.........310...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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