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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank248Aligned Residues207
% Identity29%Templatec2hakH_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:serine/threonine-protein kinase mark1; PDBTitle: catalytic and ubiqutin-associated domains of mark1/par-1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270..... ....280.........290......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMKEIKHP
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Template Sequence  GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP
Template Known Secondary structure  TT
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TTT


TT




T
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   51........60.........70.........80.........90.........100.........110
 
   297..300.........310.........320.........330.........340.........350......
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Query Sequence  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK
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Template Sequence  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR. . MKEKEARAKFRQIVSAVQYCHQ
Template Known Secondary structure  TB


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   111........120.........130.........140...... ...150.........160........
 
   357..360.........370.........380.........390.........400.........410......
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Query Sequence  KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF
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Template Sequence  KYIVHRDLKAENLLLDGDMNIKIADFGFSNEF. . . . . . . . . . . . . . . . . . . . . . . . . . TV
Template Known Secondary structure  S


S


GGG
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TT

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   169170.........180.........190.........200 ..
 
   417..420.........430.........440.........450.........460.........470......
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Query Sequence  SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW
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Template Sequence  GPEVDVWSLGVILYTLVS. GSLPF. . . . . . . . . . . . . . . . . DRIPFYMSTDCENLLKKLL
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   228.230.........240..... ....250 .........260.........
 
   477..480.........490..
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Query Sequence  QWNPSDRPSFAEIHQA
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Template Sequence  VLNPIKRGSLEQIMKD
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SSGGGS


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   286...290.........300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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