Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank47Aligned Residues251
% Identity39%Templatec4aojA_
PDB info PDB header:transferaseChain: A: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: human trka in complex with the inhibitor az-23
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.. .......270........ .280.........290.
Predicted Secondary structure 









..





.
Query SS confidence 



























. .















.












Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWK. . KYSLTVAVKTLKEDTM. EVEEFLKEAAVMK
Query Conservation               

 
 

 
      ..     



       .       
     
Alig confidence 



























..















.












Template Conservation    
          

 
 

 

            



 
             

 

 
Template Sequence  HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPKMLVAVKALKEASESARQDFQREAELLT
Template Known Secondary structure 
B

GGG
SSSSS


S

ST
Template Predicted Secondary structure 















Template SS confidence 



























































   503......510.........520.........530.........540.........550.........560..
 
   292.......300.........310.........320.........330 .........340.........
Predicted Secondary structure 














..





Query SS confidence 






































. .


















Query Sequence  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC. . NRQEVSAVVLLYMATQISS
Query Conservation   
 
 


              
 
    
 
   
   ..               

  
Alig confidence 






































..


















Template Conservation   
 
 


              
 

     
                            
Template Sequence  MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDPGPLGLGQLLAVASQVAA
Template Known Secondary structure  T


TTB


SSSS

TT
BTSS



S

Template Predicted Secondary structure 
































Template SS confidence 



























































   566...570.........580.........590.........600.........610.........620.....
 
   350.........360.........370.........380.........390.........400.........
Predicted Secondary structure 































Query SS confidence 



























































Query Sequence  AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE
Query Conservation   
  

    





  
 
       

 


 
                     


Alig confidence 



































...............








Template Conservation                                      ...............      


Template Sequence  GMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGTM. . . . . . . . . . . . . . . LPIRWMPPE
Template Known Secondary structure  TT


S


GGGTTT





...............

GGG

Template Predicted Secondary structure 





























...............






Template SS confidence 



























































   637..640.........650.........660.........670.. .......680.
 
   410.........420.........430.........440.........450.........460.........
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY
Query Conservation             



 
  
 
    
  
                              
Alig confidence 



























































Template Conservation             

 
 

 



 
 
  
            
               
 
Template Sequence  SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVY
Template Known Secondary structure  TT



TTS

TT
SS
T





TT

Template Predicted Secondary structure 

































Template SS confidence 



























































   698.700.........710.........720.........730.........740.........750.......
 
   470.........480.........490.........500
Predicted Secondary structure 





Query SS confidence 






























Query Sequence  ELMRACWQWNPSDRPSFAEIHQAFETMFQES
Query Conservation   
        
  

                
Alig confidence 






























Template Conservation   

  

  

  


  


  
  
   
Template Sequence  AIMRGCWQREPQQRHSIKDVHARLQALAQAP
Template Known Secondary structure 

SSTTTS

S
Template Predicted Secondary structure 









Template SS confidence 






























   758.760.........770.........780........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D