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Job DescriptionP00520
Confidence99.94%DateWed Jul 10 14:19:35 BST 2013
Rank328Aligned Residues154
% Identity29%Templatec2b3oA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100..
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Query Sequence  NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEA. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQG
Template Known Secondary structure  T
SSSSSTT
SSS
TTS
S
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S
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   25....30.........40.........50.........60.........70.........80....
 
   103......110.........120.........130.........140... ......150.........160
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Query Sequence  . QTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSS. GINGSFLVRESESSPGQ
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Template Sequence  VLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGD
Template Known Secondary structure 
B

SSS

B







GGG
TTB
TT



TT
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   85....90.........100.........110.........120.........130.........140....
 
   161...... ..170.........180.........190.........200..... ....210.
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Query Sequence  RSISLRY. . . . . EGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTV. . . . ADGLIT
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Template Sequence  FVLSVLSDQPKSPLRVTHIKV. MCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFV
Template Known Secondary structure 


.B

TTSBBSSSS

BSS

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   145....150.........160..... ....170.........180.........190.........200...
 
   212......
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Query Sequence  TLHYPAP
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Template Sequence  YLRQPYY
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   208.210....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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