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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank176Aligned Residues250
% Identity46%Templatec3brbB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene tyrosine-protein kinase mer; PDBTitle: crystal structure of catalytic domain of the proto-oncogene tyrosine-2 protein kinase mer in complex with adp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260... ......270... ......280......
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Query Sequence  DKWEMERTDITMKHKLGGGQYGEVYEGVWKK. . . YSLTVAVKTL. . . KEDTMEVEEFLKE
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Template Sequence  EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE
Template Known Secondary structure  TTTB

GGG
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   578.580.........590.........600.........610.........620.........630.......
 
   287..290.........300.... .....310.........320.........330.. .....
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Query Sequence  AAVMKEIKHPNLVQLLGV. . . . . CTREPPFYIITEFMTYGNLLDYLRECNR. . . . QEVSA
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Template Sequence  AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL
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BTTB





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   638.640.........650.........660.........670.........680.........690.......
 
   338.340.........350.........360.........370.........380.........390.......
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Query Sequence  VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA
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Template Sequence  QTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGL. . . . . . . . . . . . .
Template Known Secondary structure  TT





SGGG
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   698.700.........710.........720.........730.........740....
 
   398.400.........410.........420.........430.........440.........450.......
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Query Sequence  GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR
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Template Sequence  . . . . PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR
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   763......770.........780.........790.........800.........810........
 
   458.460.........470.........480.........490.........
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Query Sequence  MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE
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Template Sequence  LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES
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TT

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   819820.........830.........840.........850.........860
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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