Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank127Aligned Residues231
% Identity24%Templatec4g3dE_
PDB info PDB header:transferaseChain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280.........290.....
Predicted Secondary structure 

















Query SS confidence 



























































Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH
Query Conservation              

 
 

 
           



              
      
 
Alig confidence 












































....










Template Conservation              

 
 

 

          



         .... 

  
  
 
Template Sequence  DYEYREEVHWATHGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA. . . . EELMACAGLTS
Template Known Secondary structure  TTB

BTTT


SSSS
TTT

TTT

T....TTTT


Template Predicted Secondary structure 


















....


Template SS confidence 



























































   390.........400.........410.........420.........430.... .....440.....
 
   296...300.........310.........320.........330.........340.........350.....
Predicted Secondary structure 

















Query SS confidence 



























































Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
Query Conservation   


              
 
    
 
   
                  

   
  

Alig confidence 

































..























Template Conservation 



             

 
      
      ..                   
   
Template Sequence  PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE. . QGCLPEDRALYYLGQALEGLEYLH
Template Known Secondary structure  TTB

TT


TT
B..SSS

Template Predicted Secondary structure 




























..





Template SS confidence 



























































   450.........460.........470.........480... ......490.........500.......
 
   356...360.........370.... .....380.........390.........400.........410....
Predicted Secondary structure 











.





















Query SS confidence 


















.







































Query Sequence  KKNFIHRDLAARNCLVGEN. HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
Query Conservation      





  
 
    .   

 


 
                     


     
Alig confidence 


















.


















...........









Template Conservation       
       
          
 


          ...........
 


 
   
Template Sequence  SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPGTT. . . . . . . . . . . HMAPEVVLGR
Template Known Secondary structure  TT




GGG
SSS




TT






...........


TT
Template Predicted Secondary structure 


























...........



Template SS confidence 



























































   508.510.........520.........530.........540...... ...550......
 
   415....420.........430.........440.........450.........460.........470....
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA
Query Conservation        



 
  
 
    
  
                               
   
Alig confidence 



















.




...............


















Template Conservation       














.
  
 ...............               

  
Template Sequence  SCDAKVDVWSSCCMMLHMLN. GCHPP. . . . . . . . . . . . . . . PVREIPPSCAPLTAQAIQE
Template Known Secondary structure 


T.SS


...............GGGG

TTS
Template Predicted Secondary structure 




.




...............






Template SS confidence 



























































   572.......580.........590. ..... ...600.........610.....
 
   475....480.........490.........
Predicted Secondary structure 




Query SS confidence 
























Query Sequence  CWQWNPSDRPSFAEIHQAFETMFQE
Query Conservation       
  

               
Alig confidence 
























Template Conservation 

  

  


  


  
      
Template Sequence  GLRKEPIHRVSAAELGGKVNRALQQ
Template Known Secondary structure  T
SSTTTS

Template Predicted Secondary structure 






Template SS confidence 
























   633......640.........650.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D