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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank57Aligned Residues250
% Identity23%Templatec2wtkC_
PDB info PDB header:transferase/metal-binding proteinChain: C: PDB Molecule:serine/threonine-protein kinase 11; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270......... 280.........290.....
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Query Sequence  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME. . . . . VEEFLKEAAVMKEIKH
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Template Sequence  KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH
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   48.50.........60.........70.........80.........90.........100.......
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  KNVIQLVDVLY. NEKMYMVMEYCVCG. MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH
Template Known Secondary structure  TTB

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S.STT
S

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   108.110........ .120.........130.. .......140.........150.........160.....
 
   356...360.........370.........380...... ...390.........400.........410....
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Query Sequence  KKNFIHRDLAARNCLVGENHLVKVADFGLSR. LMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL
Template Known Secondary structure  TT
S

SGGG
TT




TT


TT
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S
GGG

T

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   169170.........180.........190.........200.........210.........220........
 
   415 ....420.........430.........440.........450.........460.........470..
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Query Sequence  K. . FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM
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Template Sequence  DTFSGFKVDIWSAGVTLYNITT. GLYPFEGDNIYKLFENIGKG. SYAIPGDCGPPLSDLL
Template Known Secondary structure  S
S.SS
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SSS
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   229230.........240.........250 .........260.........270 .........280......
 
   473......480.........490....
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Query Sequence  RACWQWNPSDRPSFAEIHQAFE
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Template Sequence  KGMLEYEPAKRFSIRQIRQHSW
Template Known Secondary structure  T
SSTTTS

S
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   287..290.........300........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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