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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank187Aligned Residues229
% Identity19%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270.........280.........290.........300........
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Query Sequence  GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE
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Template Sequence  NFIKIGIVCIATVRSSGKLVAVKKMDL. . . . . . . LFNEVVIMRDYQHENVVEMYNSYLVG
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BTTS










.......TS


TTB

SS
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   323......330.........340......... 350.........360.........370.....
 
   309310.........320.........330.........340.........350.........360........
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Query Sequence  PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN
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Template Sequence  DELWVVMEFLEGGALTDIV. . . THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS
Template Known Secondary structure  S




S
BT...TTS


TTB

S

SGGG
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   389390.........400....... ..410.........420.........430.........440.....
 
   369370.........380.........390.........400.........410.........420........
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Query Sequence  CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL
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Template Sequence  ILLTHDGRVKLSDFGFCAQVEVPRRK. . . . LVGTPYWMAPELISRLPYGPEVDIWSLGIM
Template Known Secondary structure 
TTS



TT

B




B
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S
GGG

TT

B
T
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   446...450.........460.........470. ........480.........490.........500.
 
   429430.........440.........450.........460 .........470.........480......
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Query Sequence  LWEIATYGMSPYPGIDLSQVYELLEKDYRMER. . PEGCPEKVYELMRACWQWNPSDRPSF
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Template Sequence  VIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA
Template Known Secondary structure  T.SS
TTTTS
TS




S

TT



SSGGGS

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   505....510 .........520.........530.........540.........550.........560...
 
   487..490..
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Query Sequence  AEIHQA
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Template Sequence  AELLKH
Template Known Secondary structure  TT
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   564.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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