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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank284Aligned Residues263
% Identity25%Templatec1bl6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (map kinase p38); PDBTitle: the complex structure of the map kinase p38/sb216995
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250.........260.........270.... ...
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Query Sequence  NKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . EDT
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Template Sequence  ERPTFYRQELNKTIWEVP. ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI
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   4.....10.........20. ........30.........40.........50.........60..
 
   278.280.........290.........300....... ..310.........320.........330.
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Query Sequence  MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR. . . . . . EPPFYIITEFMTYGNLLDYLRECN
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Template Sequence  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK. . . .
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   63......70.........80.........90.........100.........110........
 
   332.......340.........350.........360.........370.........380.........390.
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Query Sequence  RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD
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Template Sequence  CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD.
Template Known Secondary structure  TS


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GGG
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   119120.........130.........140.........150.........160.........170.......
 
   392.......400.........410.........420.........430.........440.........450.
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Query Sequence  TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL
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Template Sequence  . . EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT. GRTLFPGTDHIDQLKL
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   178.180.........190.........200.........210........ .220.........230....
 
   452.......460. ........470.........480.
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Query Sequence  LEKDYRMERP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EGCPEKVYELMRACWQWNPS
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Template Sequence  ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD
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GGGTSTT

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   235....240.........250.........260.........270.........280.........290....
 
   482.......490..
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Query Sequence  DRPSFAEIHQA
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Template Sequence  KRITAAQALAH
Template Known Secondary structure  GS

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   295....300.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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