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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank291Aligned Residues240
% Identity25%Templatec1jnkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:c-jun n-terminal kinase; PDBTitle: the c-jun n-terminal kinase (jnk3s) complexed with mgamp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270..... ....280.........290......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMKEIKHP
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Template Sequence  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK
Template Known Secondary structure  TT
SSTTTTSGGGS


T
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   62.......70.........80.........90.........100.........110.........120.
 
   297..300........ .310.........320.........330.........340.........350
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Query Sequence  NLVQLLGVCTRE. . . . . . PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
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Template Sequence  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME. . . . . LDHERMSYLLYQMLCG
Template Known Secondary structure  TB


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   122.......130.........140.........150.........160 .........170......
 
   351........360.........370.........380.........390.........400.........410
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Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLASFMMTP. . . . . . . YVVTRYYRAPEV
Template Known Secondary structure  TT






GGG
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TT

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   177..180.........190.........200.........210....... ..220.........
 
   411........420.........430.........440.........450.........460..
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Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE. . . . . . . .
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Template Sequence  ILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT
Template Known Secondary structure  TT



TT.SS
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   235....240.........250........ .260.........270.........280.........290...
 
   463......470.........480.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GCPEKVYELMRACWQWNPSDRPSFAEI
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Template Sequence  VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA
Template Known Secondary structure  TS






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   294.....300.........310.........320.........330.........340.........350...
 
   490..
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Query Sequence  HQA
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Template Conservation 
 
Template Sequence  LQH
Template Known Secondary structure  SS
Template Predicted Secondary structure 

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   354..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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