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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank103Aligned Residues247
% Identity26%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270.........280.........290......
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Query Sequence  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP
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Template Sequence  VQLNQYTLKDEI. . GKYGVVKLAYNENDNTYYAMKVLSKK. . . . EQVYQEIAILKKLDHP
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   161........170.. .......180.........190........ .200.........210....
 
   297..300...... ...310.........320.........330.........340.........350....
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Query Sequence  NLVQLLGVCT. . REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL
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Template Sequence  NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP. . . TLKPLSEDQARFYFQDLIKGIEYL
Template Known Secondary structure  TB


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   248.250.........260.........270.........280 .........290.........300....
 
   355....360.........370.........380.........390.........400.........410....
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Query Sequence  EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  HYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN. TVGTPAFMAPESLSET
Template Known Secondary structure  TT




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   305....310.........320.........330.........340....... ..350.........360...
 
   415 ....420.........430.........440.........450..... ....460.........470
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Query Sequence  K. . . FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD. YRMERPEGCPEKVYE
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Template Sequence  RKIFSGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKD
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   364.....370.........380...... ...390.........400.........410.........420..
 
   471........480.........490....
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Query Sequence  LMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  LITRMLDKNPESRIVVPEIKLHPW
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   423......430.........440......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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