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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank241Aligned Residues244
% Identity20%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260.........270... ......280........
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Query Sequence  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL. . . KEDTMEVEEFLKEAA
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Template Sequence  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNE. KKQIYAIKYVNLEEADNQTLDSYRNEIA
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TT

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   515....520.........530.........540..... ....550.........560.........570...
 
   289290.... .....300.........310.........320.........330.........340......
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Query Sequence  VMKEIK. . HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ
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Template Sequence  YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS. . . IDPWERKSYWKN
Template Known Secondary structure  GGG
TTB


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   574.....580.........590.........600.........610........ .620.........630
 
   347..350.........360.........370.........380.........390.........400......
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Query Sequence  ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT
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Template Sequence  MLEAVHTIHQHGIVHSDLKPANFLI. VDGMLKLIDFGIA. . . . . . . . . . . . . NQGTVNYM
Template Known Secondary structure  TT






GGG.TT


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   631........640.........650..... ....660........ .670......
 
   407..410..... ....420.........430.........440... ......450.........460...
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Query Sequence  APESLAYNK. FSIKSDVWAFGVLLWEIATYGMSPYPGI. . DLSQVYELLEKDYRMERPEG
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Template Sequence  PPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDI
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   691........700.........710......... 720.........730.........740.........
 
   464.....470.........480.........490....
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Query Sequence  CPEKVYELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  PEKDLQDVLKCCLKRDPKQRISIPELLAHPY
Template Known Secondary structure  S
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   760.........770.........780.........790
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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