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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank99Aligned Residues240
% Identity23%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250..... ....260.........270.........280.........290... .
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Query Sequence  MERTDITMKHKLGGGQYGE. VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI. K
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMFD. . NRDVAVKRILPECFS. . FADREVQLLRESDE
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SS
B
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   566...570.........580.........590.. .......600....... ..610.........620.
 
   295....300.........310.........320.........330.........340.........350....
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Query Sequence  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL
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Template Sequence  HPNVIRYFCTEKDRQFQYIAIELCA. ATLQEYVEQ. KDFAHLGLEPITLLQQTTSGLAHL
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TTB


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   622.......630.........640...... ...650..... ....660.........670.........
 
   355....360.........370...... ...380.........390.........400.........
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Query Sequence  EKKNFIHRDLAARNCLVGENHL. . . . . VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE
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Template Sequence  HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAP. . . . . . . . . . GTEGWIAPE
Template Known Secondary structure  TT





SGGG


BTTTB




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   680.........690.........700.........710.........720 .........
 
   410.........420.........430.........440.........450... ......460.......
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Query Sequence  SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE. . KDYRMERPEGCPEK
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Template Sequence  MLSEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI
Template Known Secondary structure  GGT




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   742.......750.........760.........770.........780.........790.........800.
 
   468.470.........480.........490..
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Query Sequence  VYELMRACWQWNPSDRPSFAEIHQA
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Template Sequence  ARELIEKMIAMDPQKRPSAKHVLKH
Template Known Secondary structure  T
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   805....810.........820.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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