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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank247Aligned Residues279
% Identity22%Templatec1vzoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260. ........270.... .....280.......
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVW. . . KKYSLTVAVKTLK. . . . . EDTMEVEEFLKEA
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Template Sequence  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER
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GGGTTT
SSTTTT
SSSGGG


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   43......50.........60.........70.........80.........90.........100..
 
   288.290 .........300.........310.........320.........330.........340......
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Query Sequence  AVM. KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ
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Template Sequence  QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ. . RERFTEHEVQIYVGE
Template Known Secondary structure  T
TTB

TT



S
B..S


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   103......110.........120.........130.........140..... ....150.........160
 
   347..350.........360.........370.........380.........390.........400......
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Query Sequence  ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT
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Template Sequence  IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI. EY
Template Known Secondary structure  TT






GGG
TTS
S
SS

GGGGGGG
GGGS

.TT
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   161........170.........180.........190.........200.........210....... ..
 
   407..410.........420.........430.........440.........450..... ....460...
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Query Sequence  APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD. . . YRMERPEG
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Template Sequence  MAPDIVRGGDDKAVDWWSLGVLMYELLT. GASPFTVDGEKNSQAEISRRILKSEPPYPQE
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TT


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TTS
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TT
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   220.........230.........240....... ..250.........260.........270........
 
   464.....470.........480.... .....490.........500.........510........
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Query Sequence  CPEKVYELMRACWQWNPSDRP. . . . . SFAEIHQAFETMFQESSISDEVEKELGKRGTRGG
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Template Sequence  MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH. . . . . . . LFFQKINWDDLAAKKVPAP
Template Known Secondary structure  S
T
SSGGGSTTSSTTTTS.......GGGTT

TT
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S
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   282.......290.........300.........310..... ....320.........330....
 
   519520.....
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Query Sequence  AGSMLQA
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Template Sequence  FKPVIRD
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   335....340.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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