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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank254Aligned Residues233
% Identity14%Templatec3otvC_
PDB info PDB header:transferaseChain: C: PDB Molecule:probable conserved transmembrane protein; PDBTitle: crystal structure of the intracellular domain of rv3910 from2 mycobacterium tuberculosis
Resolution3.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270...... ...280.........290..
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Query Sequence  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED. . . . TMEVEEFLKEAAVMKE
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Template Sequence  IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSR
Template Known Secondary structure  TTTT



TTTTTT
TT

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   24.....30.........40.........50.........60.........70.........80...
 
   293......300.........310.........320.........330.........340.........350..
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Query Sequence  IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME
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Template Sequence  IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA. . . . DTSPSPVGAIRAMQSLAAAAD
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TTB


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   84.....90.........100.........110........ .120.........130.........
 
   353......360.........370.........380.........390.........400.........410..
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Query Sequence  YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
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Template Sequence  AAHRAGVALSIDHPSRVRVSIDGDVVLAYPATM. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT





SGGGTTS

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   140.........150.........160.........170..
 
   413......420.........430.........440.........450.........460.. ....
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Query Sequence  YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE. . . . . . GCPE
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Template Sequence  . PDANPQDDIRGIGASLYALLV. NRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPF
Template Known Secondary structure  .TT

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B
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B
TTS
B

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TTS
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   173......180.........190... ......200.........210.........220.........230
 
   467..470.........480.... .....490.........500..
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Query Sequence  KVYELMRACWQWNPSDRP. . SFAEIHQAFETMFQESSI
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Template Sequence  QISAVAARSVQGDGGIRSASTLLNLMQQATAVADRTEV
Template Known Secondary structure  SSSS



TT
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   231........240.........250.........260........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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