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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank206Aligned Residues242
% Identity22%Templatec3dlsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280 .........290
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV. . . . . . . . . EEFLKEAAVM
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Template Sequence  QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL
Template Known Secondary structure 
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STTTTSTTS
TTSTTT
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   997..1000.........1010.........1020.........1030.........1040.........1050......
 
   291........300.........310.........320.........330.........340.........350
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Query Sequence  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
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Template Sequence  SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID. RHPRLDEPLASYIFRQLVSA
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   1057..1060.........1070.........1080.........1090..... ....1100.........1110.....
 
   351........360.........370.........380.........390.........400.........410
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Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG. . KLFYTFCGTIEYCAPEV
Template Known Secondary structure  TT
S

SGGG
TTS



TT


TT..

B
S

S
GGG

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   1116...1120.........1130.........1140.........1150...... ...1160.........1170...
 
   411.... ....420.........430.........440.........450.........460.........
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Query Sequence  LAYNK. FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY
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Template Sequence  LMGNPYRGPELEMWSLGVTLYTLVF. EENPFCELEE. . . . . . . TVEAAIHPPYLVSKELM
Template Known Secondary structure  TT

B
S.SS
S
SSGGG.......GTTT



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   1174.....1180.........1190........ .1200........ .1210.........1220.....
 
   470.........480.........490..
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Query Sequence  ELMRACWQWNPSDRPSFAEIHQA
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Template Sequence  SLVSGLLQPVPERRTTLEKLVTD
Template Known Secondary structure  T
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   1226...1230.........1240........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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