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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank28Aligned Residues249
% Identity20%Templatec1koaA_
PDB info PDB header:kinaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270........ .280.........290........
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM. EVEEFLKEAAVMKEIKHPNL
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Template Sequence  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL
Template Known Secondary structure  GTTTTTTT


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   5940.........5950.........5960.........5970.........5980.........5990.........
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN
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Template Sequence  VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD. EHNKMSEDEAVEYMRQVCKGLCHMHENN
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   6000.........6010.........6020.........6030 .........6040.........6050........
 
   359360.........370.... .....380.........390.........400.........410......
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Query Sequence  FIHRDLAARNCLVGEN. . HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF
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Template Sequence  YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT. . TGTAEFAAPEVAEGKPV
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GGGSSTTS




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   60596060.........6070.........6080.........6090......... 6100.........6110......
 
   417..420.........430.........440.........450.........460.... .....470...
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Query Sequence  SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC. . . PEKVYELMR
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Template Sequence  GYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR
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   6117..6120.........6130.... .....6140.........6150.........6160.........6170.....
 
   474.....480.........490..
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Query Sequence  ACWQWNPSDRPSFAEIHQA
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Template Sequence  KLLLADPNTRMTIHQALEH
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   6176...6180.........6190....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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