Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank10Aligned Residues255
% Identity42%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å
Model Dimensions (Å)X:45.063 Y:61.107 Z:39.151

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250.........260. ........270.... .....280...
Predicted Secondary structure 














...




..

Query SS confidence 
































. . .












. .








Query Sequence  SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW. . . KKYSLTVAVKTLK. . EDTMEVEEF
Query Conservation                     

 
 

 
     ...      



   ..         
Alig confidence 
































...












..








Template Conservation   
      
      
 
 

 
 

 

 
           



  
          
Template Sequence  MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF
Template Known Secondary structure 



STTB

GGG

SS



SSS



TTTTS
Template Predicted Secondary structure 























Template SS confidence 



























































   409410.........420.........430.........440.........450.........460........
 
   284.....290.........300.........310.........320.........330.........340...
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM
Query Conservation    
      
 
 


              
 
    
 
   
                
Alig confidence 






















.





















.












Template Conservation    
  

  
 




 
 
   .     



    


   
  .    
        
Template Sequence  LQEALTMRQFDHPHIVKLIGVIT. ENPVWIIMELCTLGELRSFLQV. RKFSLDLASLILY
Template Known Secondary structure  TT


TTB


.SSS


TT
B.TTTT

Template Predicted Secondary structure 




.








.





Template SS confidence 



























































   469470.........480.........490. ........500.........510... ......520......
 
   344.....350.........360.........370.........380.........390.........400...
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI
Query Conservation    

   
  

    





  
 
       

 


 
                  
Alig confidence 











































..............

Template Conservation    


 

 


   


 


  



      

 





 .............. 
Template Sequence  AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRL. . . . . . . . . . . . . . PI
Template Known Secondary structure  TTT


S

SGGGTT







..............
G
Template Predicted Secondary structure 


















..............
Template SS confidence 



























































   527..530.........540.........550.........560.........570 ..
 
   404.....410.........420.........430.........440.........450.........460...
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG
Query Conservation     


           



 
  
 
    
  
                        
Alig confidence 



























































Template Conservation     


 
        







 
 



 
  

       
   
  
 
   
  
Template Sequence  KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN
Template Known Secondary structure  GG





TTS

TTTT

TT





TT
Template Predicted Secondary structure 


























Template SS confidence 



























































   587..590.........600.........610.........620.........630.........640......
 
   464.....470.........480.........490.........
Predicted Secondary structure 






Query SS confidence 



































Query Sequence  CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE
Query Conservation         
        
  

               
Alig confidence 



































Template Conservation   
  
  

  

  

  


   
   
  
   
Template Sequence  CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE
Template Known Secondary structure 

TT
SSGGGS

Template Predicted Secondary structure 








Template SS confidence 



































   647..650.........660.........670.........680..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D