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Job DescriptionP00520
Confidence99.93%DateWed Jul 10 14:19:35 BST 2013
Rank331Aligned Residues141
% Identity30%Templatec3ps5A_
PDB info PDB header:hydrolase, signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 6; PDBTitle: crystal structure of the full-length human protein tyrosine2 phosphatase shp-1
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100
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Query Sequence  NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWC. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQG
Template Known Secondary structure  T

SSSTTSTT
SS
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   25....30.........40.........50.........60.........70.........80....
 
   101........110.........120.........130.........140... ......150.........
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Query Sequence  EAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSS. GINGSFLVRESESSPG
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Template Sequence  VLQDRDGT. IIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPG
Template Known Secondary structure 

B
SS

.B




B




S

STTS



TT
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   85....90.. .......100.........110.........120.........130.........140...
 
   160......... 170.........180.........190.........200......
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Query Sequence  QRSISLRYEG. . . . . . . . . RVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVA
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Template Sequence  DFVLSVLSDQPKAGPGSPLRVTHIKVMC. EGGRYTVGGLETFDSLTDLVEHFKKTG
Template Known Secondary structure 
SSSTTS
B
.GGG
BBSSSS

BSSS
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   144.....150.........160.........170. ........180.........190........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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