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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank300Aligned Residues239
% Identity22%Templatec3n9xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase; PDBTitle: crystal structure of map kinase from plasmodium berghei, pb000659.00.0
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270..... ....280.........290......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMKEIKHP
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Template Sequence  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD
Template Known Secondary structure  TTTTTTTT
STTTS


T
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   26...30.........40.........50.........60.........70.........80.....
 
   297..300........ .310.........320.........330.........340.........350.
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Query Sequence  NLVQLLGVCTRE. . . . . PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM
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Template Sequence  YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK. . . TPIFLTEEHIKTILYNLLLGE
Template Known Secondary structure  TB




S
TTT




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   86...90.........100.........110.........120. ........130.........140..
 
   352.......360.........370.........380.........390.........400.........410.
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Query Sequence  EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL
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Template Sequence  NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR. . . . . . . . . . TIHVVTRWYRAPELI
Template Known Secondary structure  TT




GGG
TT




TT
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TT

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   143......150.........160.........170....... ..180.........190..
 
   412.... ...420.........430.........440....
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Query Sequence  AYNKF. SIKSDVWAFGVLLWEIATYGMSPYPGID. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLQENYTKSIDIWSTGCIFAELLN. MLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNII
Template Known Secondary structure  TT
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TT.T
TTT
SSGGG


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S


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   224.....230.........240....... ..250.........260.........270.........280..
 
   445....450......... 460.........470.........480..
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Query Sequence  . . . . . . . . . . . . . . . . . . . LSQVYELLEKDYRME. . . RPEGCPEKVYELMRACWQWNPSD
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Template Sequence  FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNK
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S

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STTS
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   293......300.........310.........320.........330.........340.........350..
 
   483......490..
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Query Sequence  RPSFAEIHQA
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Template Sequence  RITIDQALDH
Template Known Secondary structure  S

T
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   353......360..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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