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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank293Aligned Residues247
% Identity22%Templatec3ll6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270.... .....280.........290.
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Query Sequence  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. EDTMEVEEFLKEAAVMK
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Template Sequence  QTVELGELRLRVRRVLAEG. FAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK
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   21........30......... 40.........50.........60.........70.........
 
   292.. .....300.........310. ........320.........330.........340..
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Query Sequence  EIK. HPNLVQLLGVCTREPPF. . . . . . . . YIITEFMTYGNLLDYLRECNRQEVSAVVLLY
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Template Sequence  KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK
Template Known Secondary structure  TTSTTB


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   81........90.........100.........110.........120.........130.........140
 
   343......350....... ..360.........370.........380.........390.........400
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Query Sequence  MATQISSAMEYLEKK. . NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK
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Template Sequence  IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI. . . . . . . . . . . S
Template Known Secondary structure  TSSS

B




GGG

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TT
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   141........150.........160.........170.........180........ .
 
   401........410.........420.........430.........440.........450.........460
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Query Sequence  FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER
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Template Sequence  HYPDTPEIIDYSNFPIGEKQDIWALGCILYLLCF. RQHPFESIP. . . . . . . . . . . . . . . P
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   190.........200.........210.........220... ......230.. .
 
   461........470.........480.........490.........500.......
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Query Sequence  PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE
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Template Sequence  HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSP
Template Known Secondary structure  T

SSS
SSGGGS

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   271........280.........290.........300.........310.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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