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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank30Aligned Residues268
% Identity41%Templatec1lufA_
PDB info PDB header:transferaseChain: A: PDB Molecule:muscle-specific tyrosine kinase receptor musk; PDBTitle: crystal structure of the musk tyrosine kinase: insights2 into receptor autoregulation
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250.........260.. .......270.... .....280
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Query Sequence  VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK. . . . . KYSLTVAVKTLK. . EDTMEV
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Template Sequence  LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ
Template Known Secondary structure 

TB

GGG

SS
TSSTTSS

TT

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   560.........570.........580.........590.........600.........610.........
 
   281........290.........300.........310.........320.........330.........340
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Query Sequence  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL
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Template Sequence  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPPPLSCAEQ
Template Known Secondary structure  T


TTB


SSSS


TT
BT





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   620.........630.........640.........650.........660.........670.........
 
   341........350.........360.........370.........380.........390.........400
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Query Sequence  LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK
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Template Sequence  LCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK. . . DA
Template Known Secondary structure  TT


S

SGGG
GGG



S
TGGG
B
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   702.......710.........720.........730.........740.........750...... ..
 
   401........410.........420.........430.........440.........450.........460
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Query Sequence  FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER
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Template Sequence  IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC
Template Known Secondary structure  B
GGG





TTT

TTTTS
TT




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   763......770.........780.........790.........800.........810.........820..
 
   461........470.........480.........490........
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Query Sequence  PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ
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Template Sequence  PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE
Template Known Secondary structure 
TT

T
SSGGGS

TT
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   823......830.........840.........850.........860
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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