Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank165Aligned Residues244
% Identity25%Templatec3qd2B_
PDB info PDB header:gene regulationChain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.... .....280.........290.......
Predicted Secondary structure 









..






Query SS confidence 


































. .






















Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . EDTMEVEEFLKEAAVMKEIKHPN
Query Conservation          

 
 

 
           



   ..           
      
 
 
Alig confidence 











.





















..






















Template Conservation    
     

 
.

 

 
    
   



 
              

 

  
 


Template Sequence  TDFEPIQCMGRG. FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG
Template Known Secondary structure 

.
STTT



STTTTS


TT
Template Predicted Secondary structure 


.













Template SS confidence 



























































   587..590........ .600.........610.........620.........630.........640.....
 
   298.300.........310. ........320.........330.. .......340...
Predicted Secondary structure 


.............








.



Query SS confidence 













. . . . . . . . . . . . .




















.










Query Sequence  LVQLLGVCTREPPF. . . . . . . . . . . . . YIITEFMTYGNLLDYLRECNR. QEVSAVVLLYM
Query Conservation 

            .............  
 
    
 
   
     .           
Alig confidence 













.............




















.










Template Conservation 

 
                        

 
                            
Template Sequence  IVRYFNAWLETPPEKWQEEMDEPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI
Template Known Secondary structure  B



S







SS
T

SGGGS
Template Predicted Secondary structure 
































Template SS confidence 



























































   647..650.........660.........670.........680.........690.........700......
 
   344.....350.........360.........370.........380.........390.........400...
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI
Query Conservation    

   
  

    





  
 
       

 


 
                  
Alig confidence 


















































.....



Template Conservation         
                                           .....    
Template Sequence  FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDTHG. . . . . QVTK
Template Known Secondary structure  TT




GGG
TT




TT

S




.....


G
Template Predicted Secondary structure 





































.....



Template SS confidence 



























































   916...920.........930.........940.........950.........960...... ...970
 
   404.....410.........420.........430.........440.........450.........460...
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG
Query Conservation     


           



 
  
 
    
  
                        
Alig confidence 






























.




..




















Template Conservation      

           












 .
  

..               
     
Template Sequence  LYMSPEQIHGNNYSHKVDIFSLGLILFELLY. SFSTQ. . MERVRIITDVRNLKFPLLFTQ
Template Known Secondary structure  GGS





TS.



..TT


Template Predicted Secondary structure 













.




..











Template SS confidence 



























































   987..990.........1000.........1010....... ..1020.. .......1030.........1040...
 
   464.....470.........480.........490..
Predicted Secondary structure 






Query SS confidence 




























Query Sequence  CPEKVYELMRACWQWNPSDRPSFAEIHQA
Query Conservation         
        
  

        
Alig confidence 




























Template Conservation         

   
  

  


  


 
Template Sequence  KYPQEHMMVQDMLSPSPTERPEATDIIEN
Template Known Secondary structure 

SSGGGS

S
Template Predicted Secondary structure 










Template SS confidence 




























   1044.....1050.........1060.........1070..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D