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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank297Aligned Residues241
% Identity26%Templatec3oz6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1, serine/threonine PDBTitle: crystal structure of mapk from cryptosporidium parvum, cgd2_1960
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270... ......280.........290.... ...
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL. KEDTMEVEEFLKEAAVMKEIK. HPN
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Template Sequence  RKYELVKKI. . . . . . . VWKSIDRRTGEVVAVKKIFDQNSTDAQRTFREIMILTELSGHEN
Template Known Secondary structure  TT

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TTT
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   910....... ..20.........30.........40.........50.........60.
 
   298.300......... 310.........320.........330.........340.........350.....
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Query Sequence  LVQLLGVCTREP. . PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  IVNLLNVLRADNDRDVYLVFDYME. TDLHAVIRANI. . . LEPVHKQYVVYQLIKVIKYLH
Template Known Secondary structure  B


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   71........80.........90.... .....100..... ....110.........120......
 
   356...360.........370.........380.........390...... ...400.........
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Query Sequence  KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH. . . . . . AGAKFPIKWTAPE
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Template Sequence  SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINYVATRWYRAPEI
Template Known Secondary structure  TT




GGG
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TT
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GGG





GGGG

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   127..130.........140.........150.........160.........170.........180......
 
   410.........420.........430.........440.........450.........
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Query Sequence  SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME. . . . . . . . . .
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Template Sequence  LLGSTKYTKGIDMWSLGCILGEILC. GKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQS
Template Known Secondary structure  TT




T.SS
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   202.......210.........220...... ...230.........240.........250.........260
 
   460.........470.........480........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RPEGCPEKVYELMRACWQWNPSDRPSFAE
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Template Sequence  PFAKTMIESLKEKVEKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAND
Template Known Secondary structure  SS






TT





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   261........270.........280.........290.........300.........310.........320
 
   489490..
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Query Sequence  IHQA
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Template Sequence  ALKH
Template Known Secondary structure  TTS
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   326...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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