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Job DescriptionP00520
Confidence99.95%DateWed Jul 10 14:19:35 BST 2013
Rank326Aligned Residues209
% Identity19%Templatec2oq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase zap-70; PDBTitle: tandem sh2 domains of zap-70 with 19-mer zeta1 peptide
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.... .....150.........160.........170.......
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Query Sequence  NSLEKHSWYHGPVSRNAAEYLLSSG. . INGSFLVRESESSPGQRSISLRYEGRVYHYRIN
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Template Sequence  DPAAHLPFFYGSISRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIE
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   5....10.........20.........30.........40.........50.........60....
 
   178.180.........190.........200.........210.........220.........230.......
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Query Sequence  TASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEM
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Template Sequence  RQLNGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAX
Template Known Secondary structure 
TTS
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   65....70.........80.........90.........100.........110.........120....
 
   238.240.........250.........260.........270........ .280.........290..
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Query Sequence  ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM. . . EVEEFLKEAAVMKE. .
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Template Sequence  VRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERXPWYHSSLTREEAERKLYSGAQ
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GGGGSTTB
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   125....130.........140.........150.........160.........170.........180....
 
   293......300.........310.........320........
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Query Sequence  . . . . . . . . . . . . . . . . . . . IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR
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Template Sequence  TDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE
Template Known Secondary structure 
TT
SSTTTT
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   185....190.........200.........210.........220.........230.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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