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Job DescriptionP00520
Confidence99.89%DateWed Jul 10 14:19:35 BST 2013
Rank360Aligned Residues186
% Identity23%Templatec1a81E_
PDB info PDB header:complex (transferase/peptide)Chain: E: PDB Molecule:syk kinase; PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140. ........150.........160.........170........
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Query Sequence  SLEKHSWYHGPVSRNAAEYLL. . SSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINT
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Template Sequence  SANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIER
Template Known Secondary structure 
GGG
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   910.........20.........30.........40.........50.........60........
 
   179180.........190.........200.........210.........220.........230..
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Query Sequence  ASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYGVSPNY. . . . . .
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Template Sequence  ELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTPQLEKLIATTA
Template Known Secondary structure  TTTTTS

BSSTT

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   6970.........80.........90.........100.........110.........120........
 
   233.. ....240.........250.........260.........270.........280......
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Query Sequence  . . . DKW. . . EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE
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Template Sequence  HEKMPWFHGKISREESEQIVLIGSKTNGK. FLIRARDNNGSYALCLLHE. . . . . . . . . . .
Template Known Secondary structure  GGG
TT

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TT
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   163......170.........180.........190. ........200.........210
 
   287..290.........300.........310.........320........
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Query Sequence  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR
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Template Sequence  . . . . . . . . . . GKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVE
Template Known Secondary structure  ..........T
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   211........220.........230.........240..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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