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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank18Aligned Residues240
% Identity25%Templatec3qa8A_
PDB info PDB header:immune system, signaling proteinChain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta
Resolution3.60 Å
Model Dimensions (Å)X:59.967 Y:64.693 Z:37.418

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.........270..... ....280.........290.........300
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Query Sequence  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . DTMEVEEFLKEAAVMKEIKHPNLVQ
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Template Sequence  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS
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   16...20.........30.........40.........50.........60.........70.....
 
   301........310. ........320.........330.. .......340.........350...
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Query Sequence  LLGVCTREPPF. . . . . . YIITEFMTYGNLLDYLRECNR. QEVSAVVLLYMATQISSAMEY
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Template Sequence  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY
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   76...80.........90.........100.........110.........120.........130.....
 
   354.....360.........370...... ...380.........390.........400.........410
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Query Sequence  LEKKNFIHRDLAARNCLVGENHL. . . VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL. . CTEFVGTLQYLAPEL
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   136...140.........150.........160.........170........ .180.........190...
 
   411........420.........430.........440. ........450.......
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Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP. GIDLSQVYELLEKDYR. . . . . . . . . . . .
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Template Sequence  LEQKKYTVTVDYWSFGTLAFECIT. GFRPFLPNWQPVQWHGKVRIVVYDDLTGAVKFSSV
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   194.....200.........210....... ..220.........230.........240.........250..
 
   458.460.........470.........480.....
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Query Sequence  . . . . MERPEGCPEKVYELMRACWQWNPSDRPS
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Template Sequence  LPTPNHLSGILAGKLERWLQCMLMWHQRTDPQ
Template Known Secondary structure  S

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   259260.........270.........280.........290
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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