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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank182Aligned Residues245
% Identity20%Templatec2zmcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human mitotic checkpoint kinase mps1 catalytic2 domain apo form
Resolution3.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270... ......280.........290..
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL. . . KEDTMEVEEFLKEAAVMKE
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLN. EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK
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   519520.........530.........540.... .....550.........560.........570.......
 
   293. .....300.........310.........320.........330.........340.........350
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Query Sequence  IK. . HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
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Template Sequence  LQQHSDKIIRLYDYEITDQYIYMVMECGNI. DLNSWLKK. . KKSIDPWERKSYWKNMLEA
Template Known Secondary structure  GGG
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   578.580.........590.........600....... ..610..... ....620.........630....
 
   351........360.........370.........380.........390.........400.........410
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Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  VHTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIANQMDS. . . . . . . . QVGTVNYMPPEA
Template Known Secondary structure  TT






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   635....640.........650...... ...660.........670... ......680.....
 
   411.. ......420.........430.........440..... ....450.........460.......
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Query Sequence  LAY. NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL. . SQVYELLEKDYRMERPEGCPEK
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Template Sequence  IKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD
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   695....700.........710......... 720.........730.........740.........750...
 
   468.470.........480.........490....
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Query Sequence  VYELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  LQDVLKCCLKRDPKQRISIPELLAHPY
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   764.....770.........780.........790
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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