Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank260Aligned Residues258
% Identity26%Templatec3zduA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........
Predicted Secondary structure 
















Query SS confidence 



























































Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV
Query Conservation          

 
 

 
           



              
      
 
 


Alig confidence 



































.....


















Template Conservation 
 
 
   

 
 

 
  
        



 
  .....     

 

  
 




Template Sequence  EMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFYN. . . . . KIAMREIKFLKQFHHENLV
Template Known Secondary structure 

TTTTT




.....


TTB
Template Predicted Secondary structure 










.....




Template SS confidence 



























































   2.......10.........20.........30....... ..40.........50......
 
   300.........310.........320.........330.........340.........350.........
Predicted Secondary structure 


















Query SS confidence 



























































Query Sequence  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF
Query Conservation                
 
    
 
   
                  

   
  

    
Alig confidence 
































..
























Template Conservation                
 
                ..                         
Template Sequence  NLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHG. . LESKRLRKYLFQILRAIDYLHSNNI
Template Known Secondary structure 


SSS


SSTTS..

TT
Template Predicted Secondary structure 


















..












Template SS confidence 



























































   64.....70.........80.........90...... ...100.........110.........120.
 
   360.........370.........380.........390.........400.........410. .......
Predicted Secondary structure 




























.





Query SS confidence 



















































.






Query Sequence  IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL. AYNKFSI
Query Conservation 





  
 
       

 


 
                     


  .       
Alig confidence 



























......

















.






Template Conservation                              ......               
          
Template Sequence  IHRDIKPENILVSQSGITKLCDFGFART. . . . . . DIYDDEVATRWYRAPELVLKDTSYGK
Template Known Secondary structure  B



SGGG
TT




SS
B
......





TT

TT
S


T
Template Predicted Secondary structure 



























......

























Template SS confidence 



























































   122.......130.........140......... 150.........160.........170.....
 
   419420.........430.........440.........450.........460..
Predicted Secondary structure 


















................
Query SS confidence 











































. . . . . . . . . . . . . . . .
Query Sequence  KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE. . . . . . . . . . . . . . . .
Query Conservation    



 
  
 
    
  
                       ................
Alig confidence 















.


























................
Template Conservation    
  


    
   .
  

           
                          
Template Sequence  PVDIWALGCMIIEMAT. GNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVL
Template Known Secondary structure  .SS
SS

SST




GGGTT


Template Predicted Secondary structure 






.




















Template SS confidence 



























































   181........190...... ...200.........210.........220.........230.........
 
   463......470.........480.........490.........500........
Predicted Secondary structure  ..............














Query SS confidence  . . . . . . . . . . . . . .













































Query Sequence  . . . . . . . . . . . . . . GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK
Query Conservation  ..............        
        
  

                        
Alig confidence  ..............





























..













Template Conservation                  
    


  

  

  
 

 
 
 
..
 
           
Template Sequence  PQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHH. . EYFTRDGFIEKFMP
Template Known Secondary structure 





SSSTTS


SSGGGS

TS..TTS
Template Predicted Secondary structure 





















..






Template SS confidence 



























































   240.........250.........260.........270.........280... ......290.......
 
   509510...
Predicted Secondary structure 
Query SS confidence 




Query Sequence  ELGKR
Query Conservation       
Alig confidence 




Template Conservation       
Template Sequence  ELKAK
Template Known Secondary structure 
Template Predicted Secondary structure 


Template SS confidence 




   298.300..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D