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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank81Aligned Residues247
% Identity25%Templatec3dfaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase cgd3_920; PDBTitle: crystal structure of kinase domain of calcium-dependent protein kinase2 cgd3_920 from cryptosporidium parvum
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270......... 280.........290......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME. . . VEEFLKEAAVMKEIKHP
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP
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   5....10.........20.........30.........40.........50.........60....
 
   297..300.........310.........320.........330.........340.........350......
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Query Sequence  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK
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Template Sequence  NIMKLFEILEDSSSFYIVGELYTGELFDEIIKRKR. . . FSEHDAARIIKQVFSGITYMHK
Template Known Secondary structure  TB


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   65....70.........80.........90......... 100.........110.........120.
 
   357..360.........370.........380.........390.........400.........410......
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Query Sequence  KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF
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Template Sequence  HNIVHRDLKPENILLK. DCDIKIIDFGLSTCFQQN. . TKMKDRIGTAYYIAPEVLR. GTY
Template Known Secondary structure  TT


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   123......130........ .140.........150...... ...160.........170..... ...
 
   417..420.........430.........440.........450...... ...460.........470...
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Query Sequence  SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY. . . RMERPEGCPEKVYELMR
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Template Sequence  DEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR
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   183......190.........200 .........210.........220.........230.........240.
 
   474.....480.........490....
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Query Sequence  ACWQWNPSDRPSFAEIHQAFE
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Template Sequence  KMLTFHPSLRITATQCLEHPW
Template Known Secondary structure  T
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   242.......250.........260..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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