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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank244Aligned Residues223
% Identity24%Templatec3famA_
PDB info PDB header:transferaseChain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250 .........260.........270.........280.........290.........300...
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Query Sequence  KHKLGG. GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG
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Template Sequence  GAHIGNYQIVKKVKLAYHTTTGQKVALKIINKKVMQ. GRIEREISYLRLLRHPHIIKLYD
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   4950.........60.........70.........80.... .....90.........100.......
 
   304.....310.........320.........330.........340.........350.........360...
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Query Sequence  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD
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Template Sequence  VIKSKDEIIMVIEYA. GNELFDYIVQRDK. . MSEQEARRFFQQIISAVEYCHRHKIVHRD
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   121........130..... ....140........ .150.........160.........170.......
 
   364.....370.........380.........390.........400.........410.........420...
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Query Sequence  LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW
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Template Sequence  LKPENLLLDEHLNVKIADFGL. . . . . . . . . . . . . . . . . . . . . SPNYAAPEVISGPEVDVW
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SGGG
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   178.180.........190........ .200.........210......
 
   424.....430.........440.........450.........460.........470.........480...
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Query Sequence  AFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR
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Template Sequence  SCGVILYVMLC. RRLPFDDESIPVLFKNISNG. VYTLPKFLSPGAAGLIKRMLIVNPLNR
Template Known Secondary structure  .SS
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   237..240....... ..250.........260....... ..270.........280.........290....
 
   484.....490....
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Query Sequence  PSFAEIHQAFE
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Template Sequence  ISIHEIMQDDW
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TT
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   295....300.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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