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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank36Aligned Residues260
% Identity40%Templatec3dpkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250.........260...... ...270..... ....280...
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Query Sequence  VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL. . TVAVKTLKE. . DTMEVEEF
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Template Sequence  IDPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGAVLKVAVKMLKSTAHADEKEAL
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GGGB

GGG
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   564.....570.........580.........590.........600.........610.........620...
 
   284.....290... ......300.........310.........320.........330.........340..
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Query Sequence  LKEAAVMKEI. KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY
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Template Sequence  MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL. . . . RRQLSSRDLLH
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TTB


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   631........640.........650.........660.........670..... ....680......
 
   343......350.........360.........370.........380.........390.........400..
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Query Sequence  MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP
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Template Sequence  FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI. . . VRLP
Template Known Secondary structure  TT
S

SGGGGGG


TTTS
GGG
TTSB...

B
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   758.760.........770.........780.........790.........800.........810 ....
 
   403......410.........420.........430.........440......... 450.........460.
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Query Sequence  IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY. ELLEKDYRMERP
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Template Sequence  VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP
Template Known Secondary structure  GGGS




TTS

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   819820.........830.........840.........850.........860.........870........
 
   462.......470.........480.........490....
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Query Sequence  EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ
Template Known Secondary structure  TT

T
SSGGGS

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   879880.........890.........900.........910.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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