Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence99.97%DateWed Jul 10 14:19:35 BST 2013
Rank324Aligned Residues128
% Identity18%Templatec1tqmA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a. fulgidus rio2 serine protein kinase bound to2 amppnp
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.........270...... ...280.........290......
Predicted Secondary structure 











......



Query SS confidence 

































. . . . . .



















Query Sequence  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED. . . . . . TMEVEEFLKEAAVMKEIKHP
Query Conservation       

 
 

 
           



     ......         
      
 
 
Alig confidence 



















.












......



















Template Conservation   
   

 
  
 

     . 
   


                    
          
Template Sequence  AIGKLMGEGKESAVFNCYSE. KFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGL
Template Known Secondary structure 
SST.TT






TTTS
Template Predicted Secondary structure 







.















Template SS confidence 



























































   93......100.........110.. .......120.........130.........140.........150.
 
   297..300.........310.........320.........330.........340.........350......
Predicted Secondary structure 
















Query SS confidence 



























































Query Sequence  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK
Query Conservation 


              
 
    
 
   
                  

   
  

 
Alig confidence 










....











.........























Template Conservation   
         .... 

 
       .........          
  


  
  

 
Template Sequence  AVPKVYAWEGN. . . . AVLMELIDAKEL. . . . . . . . . YRVRVENPDEVLDMILEEVAKFYH
Template Known Secondary structure  SS

TT....



G.........GG


S
Template Predicted Secondary structure 




....




.........

Template SS confidence 



























































   165....170..... ....180....... ..190.........200.........210.
 
   357..360.........370.........380.....
Predicted Secondary structure 


















Query SS confidence 




























Query Sequence  KNFIHRDLAARNCLVGENHLVKVADFGLS
Query Conservation     





  
 
       

 


 
Alig confidence 


















.








Template Conservation   








 



    .
 



 
 
Template Sequence  RGIVHGDLSQYNVLVSEEG. IWIIDFPQS
Template Known Secondary structure  TT
SS

TTTTT.


TT
Template Predicted Secondary structure 










.



Template SS confidence 




























   212.......220.........230 .........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D