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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank271Aligned Residues243
% Identity22%Templatec3rgfA_
PDB info PDB header:transferase,transcriptionChain: A: PDB Molecule:cyclin-dependent kinase 8; PDBTitle: crystal structure of human cdk8/cycc
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.........260.. .......270.........280.........290.
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Query Sequence  KWEMERTDITMKHKLGGGQYGEVYEGVWK. . KYSLTVAVKTLKEDTMEVEEFLKEAAVMK
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Template Sequence  KLSSERERVEDLFEYEGCKVGHVYKAKRKDGKDDKDYALKQIEGTGI. SMSACREIALLR
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   8.10.........20.........30.........40.........50.... .....60......
 
   292.......300.... .....310.........320.........330.........340.........
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Query Sequence  EIKHPNLVQLLGV. . CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS
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Template Sequence  ELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFH. RASKLPRGMVKSLLYQILD
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   72.......80.........90.........100.........110. ........120.........130
 
   350.........360.........370..... ....380.........390.........400.....
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Query Sequence  AMEYLEKKNFIHRDLAARNCLVGENH. . . . LVKVADFGLSRLMTGDTYTAHAGAKFPIKW
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Template Sequence  GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARVTFW. . . . . . . . . . . . . YR
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GGG

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   138.140.........150.........160.........170.........180.. ..
 
   406...410.........420.........430.........440.... .....450.......
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Query Sequence  TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID. . . . . . . LSQVYELLEKDYR.
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Template Sequence  APELLLGARHYTKAIDIWAIGCIFAELLT. SEPIFHCRQNPYHHDQLDRIFNVMGFPADK
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   201........210.........220......... 230.........240.........250.........
 
   458.460.........470.........480.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MERPEGCPEKVYELMRACWQWNPSDRPS
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Template Sequence  DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT
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GGGGGSTT

GGGGTT

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   266...270.........280.........290.........300.........310.........320.....
 
   486...490..
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Query Sequence  FAEIHQA
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Template Sequence  SEQAMQD
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   326...330..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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