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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank146Aligned Residues249
% Identity27%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270......... 280.........290.....
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME. . . . VEEFLKEAAVMKEIKH
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Template Sequence  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH
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   4950.........60.........70.........80.........90.........100........
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS. . RKRFSEVDAARIIRQVLSGITYMH
Template Known Secondary structure  TTB


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   109110.........120.........130.........140.. .......150.........160......
 
   356...360.........370. ........380.........390.........400.........410..
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Query Sequence  KKNFIHRDLAARNCLV. . . GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
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Template Sequence  KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK. . IGTAYYIAPEVLH
Template Known Secondary structure  TT


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   167..170.........180.........190.........200.........210. ........220....
 
   413......420.........430.........440.........450..... ....460.........
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Query Sequence  YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD. . . YRMERPEGCPEKVY
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Template Sequence  . GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK
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   225....230.........240..... ....250.........260.........270.........280..
 
   470.........480.........490....
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Query Sequence  ELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  DLIRKMLTYVPSMRISARDALDHEW
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   283......290.........300.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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