Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence99.44%DateWed Jul 10 14:19:35 BST 2013
Rank485Aligned Residues55
% Identity27%Templatec3nmzD_
PDB info PDB header:cell adhesion/cell cycleChain: D: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crytal structure of apc complexed with asef
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.........100.........110.......
Predicted Secondary structure 





























Query SS confidence 























































Query Sequence  DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYIT
Query Conservation                                                 
  
     
Alig confidence 
































.





















Template Conservation        




 
    



  

 
 
    .   

 
   
  
 

  

 
Template Sequence  SVVCAEALWDHVTMDDQELGFKAGDVIEVMDAT. NREWWWGRVADGEGWFPASFVR
Template Known Secondary structure 


SS
B



TTB

B
TT


.SSS
SS
GGG
Template Predicted Secondary structure 














.






Template SS confidence 























































   195....200.........210.........220....... ..230.........240.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D