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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank15Aligned Residues241
% Identity24%Templatec3qa8H_
PDB info PDB header:immune system, signaling proteinChain: H: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta
Resolution3.60 Å
Model Dimensions (Å)X:69.769 Y:50.472 Z:45.760

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED. . TMEVEEFLKEAAVMKEIKHPNLVQ
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Template Sequence  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS
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   16...20.........30.........40.........50.........60.........70.....
 
   301... .....310.........320.........330... ......340.........350...
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Query Sequence  LLGV. . . . . . CTREPPFYIITEFMTYGNLLDYLRECNRQ. EVSAVVLLYMATQISSAMEY
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Template Sequence  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY
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   76...80.........90.........100.........110.........120.........130.....
 
   354.....360.........370...... ...380.........390.........400.........410
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Query Sequence  LEKKNFIHRDLAARNCLVGENHL. . . VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG. . ELCTEFVGTLQYLAPEL
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   136...140.........150.........160.........170...... ...180.........190...
 
   411........420.........430.........440.........450.........460...
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Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG. . . . . . .
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Template Sequence  LEQKKYTVTVDYWSFGTLAFECIT. GFRPFLPNWQPVQWHGKVRIVVYDDLTGAVKFSSV
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   194.....200.........210....... ..220.........230.........240.........250..
 
   464.....470.........480......
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Query Sequence  . . . . . . . . . . CPEKVYELMRACWQWNPSDRPSF
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Template Sequence  LPTPNHLSGILAGKLERWLQCMLMWHQRTDPQN
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   259260.........270.........280.........290.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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