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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank286Aligned Residues224
% Identity25%Templatec3alnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270..... ....280.........
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Query Sequence  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAV
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Template Sequence  QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV
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   93......100.........110.........120.........130.........140.........150..
 
   290.........300.........310.........320....... ..330.........340.......
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Query Sequence  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL. . RECNRQEVSAVVLLYMATQI
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Template Sequence  MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT
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   153......160.........170.........180.........190.........200.........210..
 
   348.350....... ..360.........370.........380.........390.........400......
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Query Sequence  SSAMEYLEKK. NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT
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Template Sequence  VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS






SGGGB
B
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   213......220.........230.........240.........250.
 
   407..410.........420.........430.........440.........450.........460......
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Query Sequence  APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE
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Template Sequence  . . . . . . GQLYDVRSDVWSLGITLYELAT. GRFPYPDPP. . . . . . . . . . QLSNSEEREFSP
Template Known Secondary structure  ......GT


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   252.......260.........270... ......280.. .......290....
 
   467..470.........480.........490....
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Query Sequence  KVYELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  SFINFVNLCLTKDESKRPKYKELLKHPF
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   339340.........350.........360......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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