Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence99.47%DateWed Jul 10 14:19:35 BST 2013
Rank463Aligned Residues68
% Identity24%Templatec2k2mA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:eps8-like protein 1; PDBTitle: structural basis of pxxdy motif recognition in sh3 binding
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.....
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  AGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNY
Query Conservation                                                       
  
   
Alig confidence 






































.



















Template Conservation 

          


 
      


   

 
 
    .   
      
  
 

  
Template Sequence  GPLGSGALKWVLCNYDFQARNSSELSVKQRDVLEVLDDS. RKWWKVRDPAGQEGYVPYNI
Template Known Secondary structure 








SS
B


SSSB

B
TT

S.SS
TTS

GGG
Template Predicted Secondary structure 




















.





Template SS confidence 



























































   473......480.........490.........500.........510. ........520.........530.
 
   116...120....
Predicted Secondary structure 





Query SS confidence 








Query Sequence  ITPVNSLEK
Query Conservation           
Alig confidence 








Template Conservation 
   

  
Template Sequence  LTPYPAAAS
Template Known Secondary structure 

S


Template Predicted Secondary structure 





Template SS confidence 








   532.......540
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D