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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank95Aligned Residues251
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260.........270..... ....280.........290.....
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Query Sequence  RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMKEIKH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


SS




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   10.........20.........30.........40.........50.........60.........
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA. . REFYSEADASHCIQQILESIAYCH
Template Known Secondary structure  TTB


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S
BTT..
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   70.........80.........90.........100... ......110.........120.......
 
   356...360.........370.. .......380.........390.........400.........410..
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Query Sequence  KKNFIHRDLAARNCLVG. . . ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
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Template Sequence  SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS. . EAWHGFAGTPGYLSPEVLK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT
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B


S
S
GGG

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   128.130.........140.........150.........160...... ...170.........180.....
 
   413......420.........430.........440.........450.........460. ........
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Query Sequence  YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP. . . EGCPEKVY
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Template Sequence  KDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  T

B
T.SS
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TTGGGGS
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   187..190.........200........ .210.........220.........230.........240.....
 
   470.........480.........490....
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Query Sequence  ELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  SLIDSMLTVNPKKRITADQALKVPW
Template Known Secondary structure  S
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   246...250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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