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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank228Aligned Residues252
% Identity22%Templatec4fr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 32a; PDBTitle: crystal structure of human serine/threonine-protein kinase 32a (yank1)
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.... .....280.........290.
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . . EDTMEVEEFLKEAAVMK
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Template Sequence  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ
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GGG

SS

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TT
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   17..20.........30.........40.........50.........60.........70......
 
   292.......300.........310.........320.........330.........340.........350.
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Query Sequence  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM
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Template Sequence  GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ. . NVHFKEETVKLFICELVMAL
Template Known Secondary structure  T


TTB


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   77..80.........90.........100.........110.... .....120.........130....
 
   352.......360.........370.........380.........390.........400.........410.
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Query Sequence  EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL
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Template Sequence  DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE. . TQITTMAGTKPYMAPEMF
Template Known Secondary structure  TT



SGGG
TTS



TT


TT..

B



S
GGG

GGGT
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   135....140.........150.........160.........170.... .....180.........190..
 
   412. ......420.........430.........440.........450.... .....460......
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Query Sequence  AY. . . NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK. . DYRMERPEGCPE
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Template Sequence  SSRKGAGYSFAVDWWSLGVTAYELLR. GRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQ
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SS

B
T.SS
SS


TT







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   193......200.........210........ .220.........230.........240.........250.
 
   467..470.........480..... ....490..
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Query Sequence  KVYELMRACWQWNPSDRPS. FAEIHQA
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Template Sequence  EMVSLLKKLLEPNPDQRFSQLSDVQNF
Template Known Secondary structure  S
SSTTTS

ST
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   252.......260.........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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