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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank102Aligned Residues244
% Identity22%Templatec2wtkB_
PDB info PDB header:transferase/metal-binding proteinChain: B: PDB Molecule:ste20-related kinase adapter protein alpha; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250. ........260.........270... ......280.........290.....
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Query Sequence  DITMKHKLGGG. . QYGEVYEGVWKKYSLTVAVKTL. . . KEDTMEVEEFLKEAAVMKEIKH
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Template Sequence  CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH
Template Known Secondary structure  GTTTTTTT

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   68.70.........80.........90.........100.........110.........120.......
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH
Template Known Secondary structure  TTB


SS

TTT
TT


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   128.130.........140.........150.........160.........170.........180.......
 
   356...360.........370.........380.........390........ .400.........
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Query Sequence  KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG. . . . . . AKFPIKWTAPE
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Template Sequence  HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE
Template Known Secondary structure  TT



SGGG
TT



GGG

TT
S
B



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GGGGGGS
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   188.190.........200.........210.........220.........230.........240.......
 
   410.... .....420.........430.........440.........450.........460.......
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Query Sequence  SLAYN. . KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK
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Template Sequence  VLQQNLQGYDAKSDIYSVGITACELAN. GHVPFDMPATQMLLEKL. . . . . . . VPCLFSPH
Template Known Secondary structure  S

TT
B
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   248.250.........260.........270.... .....280.........290. ........
 
   468.470.........480.........490..
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Query Sequence  VYELMRACWQWNPSDRPSFAEIHQA
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Template Sequence  FHHFVEQCLQRNPDARPSASTLLNH
Template Known Secondary structure  T
SSGGGS

T
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   352.......360.........370......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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