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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank104Aligned Residues249
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVV
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   7..10.........20.........30.........40...... ...50.........60.....
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF
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Template Sequence  KFYGHRREGNIQYLFLEYCSGGELFDRIEP. . DIGMPEPDAQRFFHQLMAGVVYLHGIGI
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STT


TTGGGGSBT..TTB

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   6970.........80.........90........ .100.........110.........120......
 
   360.........370.........380........ .390.........400.........410...... .
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Query Sequence  IHRDLAARNCLVGENHLVKVADFGLSRLM. TGDTYTAHAGAKFPIKWTAPESLAYNKF. S
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Template Sequence  THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA
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S

SGGG
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TT

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B
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GGGS

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   127..130.........140.........150.........160.........170.........180......
 
   418.420.........430.........440... ......450.........460.........470.....
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Query Sequence  IKSDVWAFGVLLWEIATYGMSPYPGI. . DLSQVYELLEKDYRMERPEGCPEKVYELMRAC
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Template Sequence  EPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
Template Known Secondary structure  .SS
S
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   187..190.........200... ......210.........220.........230.........240.....
 
   476...480.........490..
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Query Sequence  WQWNPSDRPSFAEIHQA
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Template Sequence  LVENPSARITIPDIKKD
Template Known Secondary structure  S
SSTTTS

TT
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   246...250.........260..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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