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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank239Aligned Residues239
% Identity27%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270......... 280.........290... .
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME. . . . VEEFLKEAAVMKEI. K
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   295....300.........310.........320.........330.........340.........350....
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Query Sequence  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK. . SRRFDEARARFYAAEIISALMFL
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   413......420.........430.........440....... ..450.........460.........470
 
   355....360.........370.........380.........390.........400.........410....
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Query Sequence  EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  HDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEM
Template Known Secondary structure  TT
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GGG
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GGG

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   471........480.........490.........500. ........510.........520
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKS
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   530.........540......... 550.........560......... 570.........580.......
 
   475....480..... ....490..
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Query Sequence  CWQWNPSDRPS. . . . . . FAEIHQA
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILRH
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   588.590.........600.........610.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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