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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank136Aligned Residues231
% Identity26%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270...... ...280.........290.......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED. . TMEVEEFLKEAAVMKEIKHPN
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Template Sequence  DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN
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   133......140.........150.........160.........170.........180.........190..
 
   298.300.........310.........320.........330.. .......340.........350.....
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Query Sequence  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR. . QEVSAVVLLYMATQISSAMEYLE
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Template Sequence  IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH
Template Known Secondary structure  B


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   193......200.........210.........220.........230.........240.........250..
 
   356...360.........370... ......380.........390.........400.........410..
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Query Sequence  KKNFIHRDLAARNCLVGE. . . NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
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Template Sequence  SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . . . . . . . . . . . . LFKALYMAPEVFK
Template Known Secondary structure  TT


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GGGSSSSTT






GG.............GB

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GGGGG
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   253......260.........270.........280...... ...290.........
 
   413......420.........430.........440.........450.........460.........470..
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Query Sequence  YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM
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Template Sequence  . RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKAT. . . . . . . YKPLTPQAVDLL
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   311........320.........330. ........340......... 350.........360.
 
   473......480.........490..
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Query Sequence  RACWQWNPSDRPSFAEIHQA
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Template Sequence  KQMLTKDPERRPSAAQVLHH
Template Known Secondary structure  T
SSTTSS

TS
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   371........380.........390
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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