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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank204Aligned Residues258
% Identity35%Templatec3kexA_
PDB info PDB header:transferaseChain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260..... ....270........ .280.........
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYS. . . . LTVAVKTLKEDTM. . EVEEFLKEAAV
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Template Sequence  IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA
Template Known Secondary structure  B

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   684.....690.........700.........710.........720.........730.........740...
 
   290.........300.........310.........320.........330.........340.........
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Query Sequence  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS
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Template Sequence  IGSLDHAHIVRLLGLCPGSSL. QLVTQYLPLGSLLDHVRQ. HRGALGPQLLLNWGVQIAK
Template Known Secondary structure  T


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   744.....750.........760.... .....770.........780.. .......790.........800.
 
   350.........360.........370.........380.........390.........400.........
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Query Sequence  AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE
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Template Sequence  GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ. . . . LLTPIKWMALE
Template Known Secondary structure  TT


S

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   802.......810.........820.........830.........840...... ...850.......
 
   410.........420.........430.........440.........450.........460.........
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Query Sequence  SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY
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Template Sequence  SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY
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   863......870.........880.........890.........900.........910.........920..
 
   470.........480.........490.........
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Query Sequence  ELMRACWQWNPSDRPSFAEIHQAFETMFQE
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Template Sequence  MVMVKCWMIDENIRPTFKELANEFTRMARD
Template Known Secondary structure  T
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   923......930.........940.........950..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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