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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank302Aligned Residues236
% Identity23%Templatec3gc0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV
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Template Sequence  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE. . . . HTAIREVSLLKELQHRNII
Template Known Secondary structure  GG
SSSTTTT


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GGG

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   13......20.........30.........40......... 50.........60........
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF
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Template Sequence  ELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD. . . VSMRVIKSFLYQLINGVNFCHSRRC
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TT

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TT
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   76...80.........90.........100....... ..110.........120.........130..
 
   360.........370. ........380.........390.........400.........410........
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Query Sequence  IHRDLAARNCLV. GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI
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Template Sequence  LHRDLKPQNLLLSVETPVLKIGDFGLARAFEI. . . . . . . . . ITLWYRPPEILLGSRHYST
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GGG





TT

G.........GGGGG

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   133......140.........150.........160.... .....170.........180...
 
   419420.........430.........440.........450.........460
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Query Sequence  KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER. . . . . . . . . . . . . . . . . .
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Template Sequence  SVDIWSIACIWAEMLM. KTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFP
Template Known Secondary structure  .SS
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TTTSTTGGGSTT

TTS
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   197..200.........210.. .......220.........230.........240.........250.....
 
   461........470.........480.........490..
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Query Sequence  . . . . . . . . . . . PEGCPEKVYELMRACWQWNPSDRPSFAEIHQA
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Template Sequence  KFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH
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GGGS
T
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   256...260.........270.........280.........290........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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