Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank213Aligned Residues231
% Identity21%Templatec1zy5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase gcn2; PDBTitle: crystal structure of eif2alpha protein kinase gcn2: r794g2 hyperactivating mutant complexed with amppnp.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260.........270.........280.........290........
Predicted Secondary structure 
















Query SS confidence 



























































Query Sequence  RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL
Query Conservation           

 
 

 
           



              
      
 
 

Alig confidence 



























































Template Conservation     
     

 
 

 
  
        



 
            
   
  
 



Template Sequence  ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV
Template Known Secondary structure 
SSTTT


TTTTT


TTB
Template Predicted Secondary structure 


















Template SS confidence 



























































   596...600.........610.........620.........630.........640.........650.....
 
   299300...... ...310.........320.........330.........340.........350..
Predicted Secondary structure  ......















Query SS confidence 







. . . . . .













































Query Sequence  VQLLGVCT. . . . . . REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME
Query Conservation 
       ......       
 
    
 
   
                  

   
 
Alig confidence 







......






















.





















Template Conservation 
 
                 

 
             .                
     
Template Sequence  VRYYAAWLERRNFVKKSTLFIQMEYCENGTLYDLIHS. ENLNQQRDEYWRLFRQILEALS
Template Known Secondary structure 



TT





S
B.S
TTTT
Template Predicted Secondary structure 



















.








Template SS confidence 



























































   656...660.........670.........680.........690.. .......700.........710....
 
   353......360.........370.........380.........390.........400.........410..
Predicted Secondary structure 































Query SS confidence 



























































Query Sequence  YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
Query Conservation   

    





  
 
       

 


 
                     


   
Alig confidence 































................









..
Template Conservation                              
   ................        
 ..
Template Sequence  YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL. . . . . . . . . . . . . . . . GTAMYVATEV. .
Template Known Secondary structure  TT


S


GGG
TTS

S


................

GGG

TTT..
Template Predicted Secondary structure 























................





..
Template SS confidence 



























































   825....830.........840.........850...... ...860......
 
   413......420.........430.........440.........450...... ...460.........
Predicted Secondary structure 


















...








Query SS confidence 











































. . .












Query Sequence  YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY. . . RMERPEGCPEKVY
Query Conservation          



 
  
 
    
  
                 ...             
Alig confidence  .




















.
..

















...












Template Conservation  .       





 





 .
..             
               
    
Template Sequence  . LHYNEKIDMYSLGIIFFEMIY. P. . FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEK
Template Known Secondary structure  .



TS.
..
SSTSTT



TTS
TTTT
Template Predicted Secondary structure  .










.
..




















Template SS confidence 



























































   896...900.........910...... . ..920.........930.........940.........950.
 
   470.........480.........490..
Predicted Secondary structure 




Query SS confidence 






















Query Sequence  ELMRACWQWNPSDRPSFAEIHQA
Query Conservation   
        
  

        
Alig confidence 






















Template Conservation   

   
  

  


  


 
Template Sequence  KIIRLLIDHDPNKRPGARTLLNS
Template Known Secondary structure  T
S
GGGS

TS
Template Predicted Secondary structure 








Template SS confidence 






















   956...960.........970........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D