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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank184Aligned Residues242
% Identity24%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270........ .280.........290.......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM. . EVEEFLKEAAVMKEIKHPN
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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B


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   74.....80.........90.........100.........110.........120.........130...
 
   298.300.........310.........320.........330.........340.........350.......
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Query Sequence  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR. . FSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160......... 170.........180.........190..
 
   358.360.........370. ........380.........390.........400.........410....
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Query Sequence  NFIHRDLAARNCLV. . . GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF. . . . . . . . . . QQNTTAYYIAPEVLRG
Template Known Secondary structure  T


S


GGGSSSSTT


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GGG

GGGGGT
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   193......200.........210.........220...... ...230.........240..
 
   415....420.........430.........440.........450..... ....460.........470.
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Query Sequence  KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD. . . YRMERPEGCPEKVYEL
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Template Sequence  TYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL
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SGGGGGS
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   250.........260......... 270.........280.........290.........300........
 
   472.......480.........490....
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Query Sequence  MRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  IRKMLTFHPSLRITATQCLEHPW
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320.........330.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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