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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank174Aligned Residues244
% Identity19%Templatec3p1aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated tyrosine- and threonine-specific cdc2- PDBTitle: structure of human membrane-associated tyrosine- and threonine-2 specific cdc2-inhibitory kinase myt1 (pkmyt1)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270..... ....280.........290.
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMK
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Template Sequence  ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHE
Template Known Secondary structure  S
TTTTTS
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S
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   103......110.........120.........130.........140.........150.........160..
 
   292. ......300.........310.........320.........330.........340.........350
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Query Sequence  EI. KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
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Template Sequence  KVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAW. . GASLPEAQVWGYLRDTLLA
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TTB

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   163......170.........180.........190.........200. ........210.........220
 
   351........360.........370.........380.........390.........400.........410
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Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGV. . . . . . . . QEGDPRYMAPEL
Template Known Secondary structure  TT



SGGG
GGG



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GGG

GGG
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   221........230.........240.........250.........260 .........270..
 
   411........420.........430.........440.........450.........460.........470
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Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE
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Template Sequence  LQGS. YGTAADVFSLGLTILEVAC. NMELPHG. . GEGWQQLRQGYLPPEFTAGLSSELRS
Template Known Secondary structure  GGT
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ST.T



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   279280.. .......290.........300. ....... .310.........320.........330....
 
   471........480.........490..
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Query Sequence  LMRACWQWNPSDRPSFAEIHQA
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Template Sequence  VLVMMLEPDPKLRATAEALLAL
Template Known Secondary structure  S
SSTTTS

TS
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   335....340.........350......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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