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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank70Aligned Residues235
% Identity20%Templatec2pziA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260... ......270... ......280.........290........
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Query Sequence  ITMKHKLGGGQYGEVYEGVWKK. YSLTVAVKTL. . KEDTMEVEEFLKEAAVMKEIKHPNL
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Template Sequence  YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI
Template Known Secondary structure  TTGGGTTS
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   151........160.........170.........180.........190.........200.........210
 
   299300.........310 .........320.........330.........340.........350...
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Query Sequence  VQLLGVCTREPP. . . . . FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY
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Template Sequence  VQIFNFVEHTDRHGDPVGYIVMEYVGGQSL. . . . . . . . KQKLPVAEAIAYLLEILPALSY
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   211........220.........230.........240 .........250.........260..
 
   354.....360.........370.........380.........390.........400.........410...
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Query Sequence  LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY
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Template Sequence  LHSIGLVYNDLKPENIMLT. EEQLKLIDLGAVSRINSF. . . . . GYLYGTPGFQAPEIVRT
Template Known Secondary structure  TT



SGGG
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   267..270.........280..... ....290.........300... ......310.........320
 
   414.....420.........430.........440.........450.........460.........470...
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Query Sequence  NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR
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Template Sequence  GP. TVATDIYTVGRTLAALTL. DLPTRNGRYVDGL. . . . . . . PEDDPVLKTYDSYGRLLR
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   321. .......330.........340 .........350... ......360.........370.
 
   474.....480... ......490.........
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Query Sequence  ACWQWNPSDR. PSFAEIHQAFETMFQE
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Template Sequence  RAIDPDPRQRFTTAEEMSAQLTGVLRE
Template Known Secondary structure  T
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   372.......380.........390........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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