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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank189Aligned Residues267
% Identity13%Templatec2jiiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270...... ...280....
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED. . . . . . . . . . . TMEVEEFL
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Template Sequence  DKSGRQWKLKSFQTRDNQGILYEAAPTSK. . . FSLKLDAKDGRLFNEQNFFQRAAKPLQV
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TTS
TT


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   160.........170.........180........ .190.........200.........210......
 
   285....290.........300.........310 .........320.........330.........340...
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Query Sequence  KEAAVMKEIKHPNLVQLLGVCTREPP. FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM
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Template Sequence  NKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL. GRSLQSALDVSPKHVLSERSVLQV
Template Known Secondary structure  TT
TT
S




TTT

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SGGG


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   228.230.........240.........250.........260.. .......270.........280......
 
   344.....350.........360.........370........ .380.........390......
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Query Sequence  ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK. . VADFGLSRLMTGDTYTAH. . . . .
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Template Sequence  ACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGS
Template Known Secondary structure  TT
B
S


GGGTT

GGG
B
SSGGG





TTS
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   287..290.........300.........310.........320.........330.........340......
 
   397..400.........410.........420.........430.........440... ......450
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Query Sequence  . AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI. . . . . DLSQVYE
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Template Sequence  RSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY. GFLPWTNCLPNTEDIMKQKQ
Template Known Secondary structure  S
TT
S
TTT

TT



.S

TTGGGTT
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   347..350.........360.........370.........380..... ....390.........400.....
 
   451........460.. .......470.........480.........490.........500.....
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Query Sequence  LLEKDYRMERPE. . . . . GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE
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Template Sequence  KFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPY
Template Known Secondary structure  S



TTS



T

TT



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TT
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   406...410.........420.........430.........440.........450.........460.....
 
   506.
Predicted Secondary structure 
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Query Sequence  VE
Query Conservation    
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Template Conservation 

Template Sequence  DP
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 

   466.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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