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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank22Aligned Residues256
% Identity20%Templatec3c4yA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a
Resolution7.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.........260.........270......... 280.........
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Query Sequence  KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME. . . . VEEFLKEAAV
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Template Sequence  AQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI
Template Known Secondary structure  SS


GGGB





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   179180.........190.........200.........210.........220.........230........
 
   290.........300.........310.........320......... 330.........340.......
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Query Sequence  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE. . CNRQEVSAVVLLYMATQI
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Template Sequence  LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI
Template Known Secondary structure  TT


TTB

B

SS



STTTSSSS
S

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   239240.........250.........260.........270.........280.........290........
 
   348.350.........360.........370.........380.........390.........400.......
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Query Sequence  SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA
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Template Sequence  VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG. YAGTPGFMA
Template Known Secondary structure  TSB





GGG
SSS



SS

B

SS


B

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S
TTTS
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   299300.........310.........320.........330.........340........ .350.......
 
   408.410.........420.........430.........440... ......450.........460.....
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Query Sequence  PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI. . DLSQVYELLEKDYRMERPEGCP
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Template Sequence  PELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGVENKELKQRVLEQA. VTYPDKFS
Template Known Secondary structure  TT

B
TTT.SS
SSS




T

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SS

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   358.360.........370.........380.... .....390.........400....... ..410.....
 
   466...470.........480... ......490..
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Query Sequence  EKVYELMRACWQWNPSDR. . . . . PSFAEIHQA
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Template Sequence  PASKDFCEALLQKDPEKRLGFRDGSCDGLRTH
Template Known Secondary structure  T
SSSSSS

S
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   418.420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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