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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank147Aligned Residues250
% Identity15%Templatec3q60A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . . DTMEVEEFLKEAAVMKEIKHP
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Template Sequence  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGR
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   233......240.........250.........260.........270.........280.........290..
 
   297..300.........310 .........320........ .330........
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Query Sequence  NLVQLLGVCTREPP. . . . . . . . . . . . . FYIITEFMTYGNLLDYLR. . . . . ECNRQEVSAV
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Template Sequence  LLLPSDAVAVQSQPPFAQLSPGYAVANYLLLMPAA. SVDLELLFSTLDFVYVFRGDEGIL
Template Known Secondary structure  B



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   303......310.........320.........330....... ..340.........350.........360.
 
   339340.........350.........360.........370.........380.........390........
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Query Sequence  VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG
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Template Sequence  ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT. . . . RGPA
Template Known Secondary structure  TTTT
SGGG
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   365....370.........380.........390.........400.........410...... ...420
 
   399400.........410..... ....420.........430.........440.........450......
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Query Sequence  AKFPIKWTAPESLAYNK. . FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY
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Template Sequence  SSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC. LFLPFGLVTPGIKGSWKRPSL
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GGG

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   421........430.........440.........450........ .460.........470.........
 
   457..460.. .......470.........480.........490......
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Query Sequence  RMERPE. . . . . . . . GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM
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Template Sequence  RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL
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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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