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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank238Aligned Residues252
% Identity29%Templatec3zonA_
PDB info PDB header:transferaseChain: A: PDB Molecule:non-receptor tyrosine-protein kinase tyk2; PDBTitle: human tyk2 pseudokinase domain bound to a kinase inhibitor
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270.........280 .........290...
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV. EEFLKEAAVMKEI
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Template Sequence  HRVDQKEITQLSHLGQGTRTNVYEGRLR. VELRVVLKVLDPSHHDIALAFYETASLMSQV
Template Known Secondary structure 

GGGTT
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S

TT
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   582.......590.........600......... 610.........620.........630.........640
 
   294.....300.........310.........320.........330.........340.........350...
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Query Sequence  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY
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Template Sequence  SHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRR. ERGHVPMAWKMVVAQQLASALSY
Template Known Secondary structure 

TTB

TT

TT
B.TTT


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   666...670.........680.........690.........700. ........710.........720....
 
   354.....360.........370.........380........ .390.........400.........410.
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Query Sequence  LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM. . TGDTYTAHAGAKFPIKWTAPESL
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Template Sequence  LENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECL
Template Known Secondary structure  TT





SGGG


STT






S
GGGS
TTTTS
GGG
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   725....730.........740.........750.........760.........770.........780....
 
   412.......420.........430.........440.........450.........460.........470.
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Query Sequence  AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL
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Template Sequence  . . . PLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPQ. . . . . LATL
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TTTTT

TTTTS
TT






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   785....790.........800.........810.........820.........830.. ....
 
   472.......480.........490......
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Query Sequence  MRACWQWNPSDRPSFAEIHQAFETM
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Template Sequence  TSQCLTYEPTQRPSFRTILRDLTRL
Template Known Secondary structure  T
SSGGGS

TT
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   845....850.........860.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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