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Job DescriptionP00520
Confidence99.90%DateWed Jul 10 14:19:35 BST 2013
Rank353Aligned Residues127
% Identity31%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160...
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Query Sequence  TKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSI
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Template Sequence  SSGKAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAI
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S


SS
GGGSSSB

S

TTTS
TT

SSTT


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   5....10.........20.........30.........40.........50.........60....
 
   164.....170.........180.........190.........200...... ...210........
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Query Sequence  SLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVA. . . . . DGLITTLHYPAP
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Template Sequence  SIKYNVEVKHIKIMTA. EGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFK
Template Known Secondary structure  TT
.TTSSTT

BSSTTS
GGGT
TT





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   65....70.........80 .........90.........100.........110.........120...
 
   219220.........230.
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Query Sequence  KRNKPTIYGVSPN
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Template Sequence  EPEKRTISRSGPS
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   124.....130......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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