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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank195Aligned Residues233
% Identity21%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.. .......260.........270.........280.........290... ......
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Query Sequence  ITMKHKLGGGQ. YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI. KHPNLV
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Template Sequence  VKSGLQIKKNAIIDDVLQIFNKRTQEKFALKMLQDC. . . . PKARREVELHWRASQCPHIV
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   48.50.........60.........70.........80... ......90.........100...
 
   300....... ..310.........320.........330.........340.........350.....
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Query Sequence  QLLGVCTR. . . . EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH
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   119120.........130.........140.........150.........160.........170........
 
   356...360.........370... ......380.........390.........400.........410..
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Query Sequence  KKNFIHRDLAARNCLVGE. . . NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA
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Template Sequence  SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH. . NSLTTPCYTPYYVAPEVLG
Template Known Secondary structure  TT




GGGSSSSTT




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   179180.........190.........200.........210....... ..220.........230......
 
   413......420.........430.........440.........450.........460.........470..
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Query Sequence  YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM
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Template Sequence  PEKYDKSCDMWSLGVIMYILLC. GYPPFYE. . . . . . . . . . . . . FPNPEWSEVSEEVKMLI
Template Known Secondary structure  SST.SS




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   237..240.........250........ .260..... ....270.........280..
 
   473......480.........490....
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Query Sequence  RACWQWNPSDRPSFAEIHQAFE
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Template Sequence  RNLLKTEPTQRMTITEFMNHPW
Template Known Secondary structure  TTT

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   303......310.........320....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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