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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank264Aligned Residues253
% Identity24%Templatec3kmuA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270... ......280.........290.
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL. . . KEDTMEVEEFLKEAAVMK
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Template Sequence  SGIDFKQLNFLTKLNENHSGELWKGRWQ. . GNDIVVKVLKVRDWSTRKSRDFNEECPRLR
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GGG
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   186...190.........200.........210... ......220.........230.........240...
 
   292.......300.........310 .........320.........330.........340.........
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Query Sequence  EIKHPNLVQLLGVCTREPP. . FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS
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Template Sequence  IFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXAR
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   244.....250.........260.........270.........280.........290.........300...
 
   350........ .360.........370.........380.........390.........400.......
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Query Sequence  AMEYLEKKN. . FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA
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Template Sequence  GXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPG. . . . . . RXYAPAWVA
Template Known Secondary structure  TTSSS

TT


SGGG
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TTS
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   304.....310.........320.........330.........340........ .350.......
 
   408.410..... ....420.........430.........440........ .450.........460...
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Query Sequence  PESLAYNK. . . FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV. YELLEKDYRMERPEG
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Template Sequence  PEALQKKPEDTNRRSADXWSFAVLLWELVT. REVPFADLSNXEIGXKVALEGLRPTIPPG
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S
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TT
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   358.360.........370.........380....... ..390.........400.........410......
 
   464.....470.........480.........490......
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Query Sequence  CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM
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Template Sequence  ISPHVSKLXKICXNEDPAKRPKFDXIVPILEKX
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   417..420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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