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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank170Aligned Residues244
% Identity23%Templatec3kvwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity tyrosine-phosphorylation-regulated kinase PDBTitle: crystal structure of dual-specificity tyrosine phosphorylation2 regulated kinase 2 (dyrk2) in complex with an indirubin ligand
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270.........280.........290.....
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Query Sequence  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH. . . . . .
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Template Sequence  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT
Template Known Secondary structure  SSSTTTT
S
TT
TTS
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   149150.........160.........170.........180.........190.........200........
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  MNVIHMLENFTFRNHICMTFELL. SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH
Template Known Secondary structure  S
B

TT


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BTTT



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   209210.........220.........230. ........240.........250.........260.......
 
   356...360.........370..... ....380.........390.........400.........410...
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Query Sequence  KKNFIHRDLAARNCLVGENH. . LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY
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Template Sequence  KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT. . . . . IQSRFYRAPEVILG
Template Known Secondary structure  T
S

SGGGSSTTS




TT
TT




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GGG

T
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   268.270.........280.........290.........300........ .310.........320..
 
   414.....420.........430.........440.........450.........
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Query Sequence  NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME. . . . . . . . . . . . . .
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Template Sequence  ARYGMPIDMWSLGCILAELLT. GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF
Template Known Secondary structure  B


T.SS
SS

SS



TBTT
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   324.....330.........340.... .....350.........360.........370.........380..
 
   460.........470........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RPEGCPEKVYELMRACWQW
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Template Sequence  VSKGYPRYCTVTTLSDVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW
Template Known Secondary structure  B



BTTS








TT


STT
S
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T
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   383......390.........400.........410.........420.........430.........440..
 
   479480.........490..
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Query Sequence  NPSDRPSFAEIHQA
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Template Sequence  DPAVRMTPGQALRH
Template Known Secondary structure  STTTS

TS
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   446...450.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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