Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank24Aligned Residues271
% Identity40%Templatec3g0eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260.. .......270..... ....280..
Predicted Secondary structure 














.....




..
Query SS confidence 
































. . . . .












. .






Query Sequence  PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK. . . . . KYSLTVAVKTLKE. . DTMEVEE
Query Conservation                    

 
 

 
      .....     



    ..       
Alig confidence 
































.....












..






Template Conservation         
          

 
 

 


              



             
Template Sequence  PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA
Template Known Secondary structure 


GGGB

GGG
SSSSSSTT

TT

Template Predicted Secondary structure 
























Template SS confidence 



























































   577..580.........590.........600.........610.........620.........630......
 
   283......290... ......300.........310.........320.........
Predicted Secondary structure 
.












............
Query SS confidence 










.



































. . . . . . . . . . . .
Query Sequence  FLKEAAVMKEI. KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE. . . . . . . . . . . .
Query Conservation     
      
. 
 


              
 
    
 
   
  ............
Alig confidence 










.



































............
Template Conservation     
  

  
    


              
 
    
 
   
              
Template Sequence  LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP
Template Known Secondary structure 


TTB


SSSS


TT
BGGGGS
SSS

Template Predicted Secondary structure 



























Template SS confidence 



























































   637..640.........650.........660.........670.........680.........690......
 
   330.........340.........350.........360.........370.........380.....
Predicted Secondary structure  ....

























Query SS confidence  . . . .























































Query Sequence  . . . . CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS
Query Conservation  ....                

   
  

    





  
 
       

 


 
Alig confidence  ....























































Template Conservation           
       
  

   
  

    

 
    
         

 


 
Template Sequence  AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA
Template Known Secondary structure 

BTTB




TT
S

SGGGTTT


GGG
Template Predicted Secondary structure 





































Template SS confidence 



























































   755....760.........770.........780.........790.........800.........810....
 
   386.. .390.........400.........410.........420.........430.........440....
Predicted Secondary structure 
.



























Query SS confidence 


.























































Query Sequence  RLM. TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID
Query Conservation     .                  


           



 
  
 
    
  
     
Alig confidence 


.























































Template Conservation                          
           

 



 
 



 
  

    
Template Sequence  RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP
Template Known Secondary structure 

GGG
TTSTT
GGGS
T


TTT

SSTT

Template Predicted Secondary structure 



































Template SS confidence 



























































   815....820.........830.........840.........850.........860.........870....
 
   445....450.........460.........470.........480.........490.........500
Predicted Secondary structure  .

















Query SS confidence  .























































Query Sequence  . LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES
Query Conservation  .                          
        
  

                
Alig confidence  .























































Template Conservation          
               
  

  

  

  


  


  
  
    
Template Sequence  VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES
Template Known Secondary structure 
STT





TT

T
SSGGGS


Template Predicted Secondary structure 



















Template SS confidence 
























































   875....880.........890.........900.........910.........920.........930.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D