Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank164Aligned Residues244
% Identity14%Templatec3vwaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242..... ..250.........260.........270.........280.........290.........300
Predicted Secondary structure  .
















Query SS confidence 





.




















































Query Sequence  ITMKHK. LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ
Query Conservation        .

 
 

 
           



              
      
 
 


 
Alig confidence 





.




















































Template Conservation 
              

          
 
               
   
  
 




 
Template Sequence  YTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILKIPGLCT
Template Known Secondary structure 
SS
S
SSTTT




TTT


TTB

Template Predicted Secondary structure 



















Template SS confidence 



























































   17..20.........30.........40.........50.........60.........70......
 
   301...... ..310.........320.........330.........340.........350.........
Predicted Secondary structure  .


















Query SS confidence 






.



















































Query Sequence  LLGVCTR. EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF
Query Conservation         .      
 
    
 
   
                  

   
  

    
Alig confidence 






.





















....





















..

Template Conservation       
        
 
             .... 
          

  

  

.. 
Template Sequence  VLETFDSDPQSTFIVTERVVPFPWDNLGSL. . . . SQNKFGVELGISQLLATLGFLK. . NF
Template Known Secondary structure 
SSTTS




GGG....TT
TT..T
Template Predicted Secondary structure 









....


..
Template SS confidence 



























































   77..80.........90.........100...... ...110.........120........ .130
 
   360.........370.........380.........390.........400.........410.........
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK
Query Conservation 





  
 
       

 


 
                     


          
Alig confidence 





































.




















Template Conservation 

 



 



   
  

 


              .      
  

          
Template Sequence  VLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFA. SRARSYYNIIGSQLPCEDPNT
Template Known Secondary structure 



SGGG
TTS



TT
STT

.T




S
TTT
Template Predicted Secondary structure 






















.














Template SS confidence 



























































   131........140.........150.........160........ .170.........180.........
 
   420.........430.........440.........450........ .460.........
Predicted Secondary structure 














..........






Query SS confidence 






































. . . . . . . . . .










Query Sequence  SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM. . . . . . . . . . ERPEGCPEKVY
Query Conservation   



 
  
 
    
  
                   ..........           
Alig confidence 














.






















..........










Template Conservation   

 


 

 

  .                                            
Template Sequence  IDSXGLGLLIKSLXA. PSCLPKDWIVNVNXISDGKITIENFRKRLENTETWRSNPLINFY
Template Known Secondary structure  S
.TTTS
GGGTT
S
S
Template Predicted Secondary structure 
.




















Template SS confidence 



























































   190.........200.... .....210.........220.........230.........240........
 
   470.........480.........490...
Predicted Secondary structure 




Query SS confidence 























Query Sequence  ELMRACWQWNPSDRPSFAEIHQAF
Query Conservation   
        
  

         
Alig confidence 























Template Conservation    
      
   
      
   
Template Sequence  QELRELHIKDPQGKLVVXSNLENL
Template Known Secondary structure  TGGGS
Template Predicted Secondary structure 



Template SS confidence 























   249250.........260.........270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D