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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank118Aligned Residues255
% Identity20%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270... ......280.........290.
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL. . . . KEDTMEVEEFLKEAAVMK
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Template Sequence  KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS
Template Known Secondary structure  T
TTTTTTT



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T
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   4.....10.........20.........30.........40.........50.........60...
 
   292.......300.........310.........320.........330.........340.........350.
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Query Sequence  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM
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Template Sequence  QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES. . HGPLSVDTAINFTNQILDGI
Template Known Secondary structure  T


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   64.....70.........80.........90.........100. ........110.........120.
 
   352.......360.........370.........380.........390.........400.........410.
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Query Sequence  EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL
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Template Sequence  KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . . . . . . . KTVQYFSPEQA
Template Known Secondary structure  TT






GGG
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GGG

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   122.......130.........140.........150..... ....160......
 
   412.......420.........430.........440.........450......... 460.......
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Query Sequence  AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME. . . . RPEGCPEK
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Template Sequence  KGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS
Template Known Secondary structure  T



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S


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   182.......190.........200.... .....210.........220.........230.........240
 
   468.470.........480... ......490.........500........
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Query Sequence  VYELMRACWQWNPSDR. PSFAEIHQAFETMFQESSISDEVEK
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Template Sequence  LSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYE
Template Known Secondary structure  T
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   241........250.........260.........270.........280..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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