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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank306Aligned Residues242
% Identity23%Templatec3ttjA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:mitogen-activated protein kinase 10; PDBTitle: crystal structure of jnk3 complexed with cc-359, a jnk inhibitor for2 the prevention of ischemia-reperfusion injury
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270.... .....280.........
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Query Sequence  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . EDTMEVEEFLKEAAV
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Template Sequence  STFTVL. KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL
Template Known Secondary structure 
.TT
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TTTTSGGGS
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   56...60. ........70.........80.........90.........100.........110....
 
   290.........300....... ..310.........320.........330.........340...
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Query Sequence  MKEIKHPNLVQLLGVCTR. . . . . . EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM
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Template Sequence  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME. . . . . LDHERMSYL
Template Known Secondary structure 


TTB


S
S

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   115....120.........130.........140.........150.........160 .........
 
   344.....350.........360.........370.........380.........390.........400...
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Query Sequence  ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI
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Template Sequence  LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLASF. . . . . . . . . . . MMVTR
Template Known Secondary structure  TT






GGG
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   170.........180.........190.........200.........210... .....
 
   404.....410.........420.........430.........440.........450...
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Query Sequence  KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE. . . . . . . . . .
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Template Sequence  YYRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPCPEF
Template Known Secondary structure  TT

TT



TT.SS
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S

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   228.230.........240.........250........ .260.........270.........280......
 
   454.....460.........470.........480..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDYRMERPEGCPEKVYELMRACWQWNPSD
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Template Sequence  MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK
Template Known Secondary structure  TTS
TTS






S
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   287..290.........300.........310.........320.........330.........340......
 
   483......490..
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Query Sequence  RPSFAEIHQA
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Template Sequence  RISVDDALQH
Template Known Secondary structure  S

TS
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   347..350......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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