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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank76Aligned Residues254
% Identity22%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280.. .......290.
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Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE. . . . FLKEAAVMK
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Template Sequence  RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLV
Template Known Secondary structure  S

GGG
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GGG

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   65....70.........80.........90.........100.........110.........120....
 
   292.......300.........310.........320.........330.........340.........350.
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Query Sequence  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM
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Template Sequence  NGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK. FGERIPAEMARFYLAEIVMAI
Template Known Secondary structure  S
TTTB


SS



S
B.SS


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   125....130.........140.........150.........160.. .......170.........180...
 
   352.......360.........370.........380.........390.........400.........410.
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Query Sequence  EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL
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Template Sequence  DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL
Template Known Secondary structure  TT



SGGG
TTS



TT


TTS

SS

S
GGG

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   184.....190.........200.........210.........220.........230.........240...
 
   412.......420.........430.........440.........450.........460....
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Query Sequence  . . . . . . . AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC
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Template Sequence  QAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHLSLPGV
Template Known Secondary structure  T
TT
S
T.SS
TT

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   244.....250.........260.........270... ......280.........290.........300..
 
   465....470.........480.... .....490..
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Query Sequence  PEKVYELMRACWQWNPSDRP. . . SFAEIHQA
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Template Sequence  PEEARDFIQRLLC. PPETRLGRGGAGDFRTH
Template Known Secondary structure 
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GGG
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   307..310......... 320.........330......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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