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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank197Aligned Residues262
% Identity21%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270.........280.........290......
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Query Sequence  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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S
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T
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   16...20.........30.........40.........50.........60.........70.....
 
   297..300.........310.........320.........330.........340.........350......
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Query Sequence  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICN. . AGRFSEDEARFFFQQLISGVSYAHA
Template Known Secondary structure  TB


SS

TT
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   76...80.........90.........100........ .110.........120.........130...
 
   357..360.........370.... .....380.........390.........400.........410....
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Query Sequence  KNFIHRDLAARNCLVGEN. . HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  MQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . . . . . . . . TPAYIAPEVLLKKE
Template Known Secondary structure  S
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GGG


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GGG


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   134.....140.........150.........160... ......170.......
 
   415....420.........430.........440.... .....450.........460.........
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Query Sequence  KFSIKSDVWAFGVLLWEIATYGMSPYPGID. . . . . LSQVYELLEKDYRMERPEGCPEKVY
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Template Sequence  YDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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TT

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   193......200.........210.. .......220.........230.........240.........250.
 
   470.........480.........490.........500.........510.........
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Query Sequence  ELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGTRGGA
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Template Sequence  HLISRIFVADPAKRISIPEIRNH. . EWFLKNLPAGQSIEEIMQIIAEATV
Template Known Secondary structure  S
SSGGGS

TT
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TT
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   252.......260.........270.... .....280.........290.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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