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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank258Aligned Residues250
% Identity22%Templatec4b99A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 7; PDBTitle: crystal structure of mapk7 (erk5) with inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270.... .....280.........290.
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . EDTMEVEEFLKEAAVMK
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Template Sequence  FDVGD. EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK
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   4950... ......60.........70.........80.........90.........100.......
 
   292.......300........ .310.........320.........330.........340.....
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Query Sequence  EIKHPNLVQLLGVCTRE. . . . . . PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT
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Template Sequence  HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH. . . SSQPLTLEHVRYFLY
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   108.110.........120.........130.........140......... 150.........160....
 
   346...350.........360.........370.........380.........390.........400.....
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Query Sequence  QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW
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Template Sequence  QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLQY. . . FMTEYVATRWYR
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   165....170.........180.........190.........200......... 210.........220.
 
   406...410.........420.........430.........440.........450.........460..
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Query Sequence  TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE. . .
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Template Sequence  APELMLSLHEYTQAIDLWSVGCIFGEMLA. RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ
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   229230.........240.........250....... ..260.........270.........280.......
 
   463......470.........480.........490..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . GCPEKVYELMRACWQWNPSDRPSFAEIHQA
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Template Sequence  RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH
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   293......300.........310.........320.........330.........340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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