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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank322Aligned Residues194
% Identity16%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260.........270...... ...280.
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Query Sequence  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED. . . . . . . . . TMEVE
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Template Sequence  IIPNYRTDMVEV. . . . . NWIGAEADIKRDSYL. . DFDVIIKERVKKGYRDERLDENIRKS
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   310.........320. ........330...... ...340.........350.........360..
 
   282.......290.........300.........310.........320.........330.........340.
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Query Sequence  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL
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Template Sequence  RTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . . L
Template Known Secondary structure  GGGTT




TTTT


SGGGTTTT
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   380.........390.........400.........410.........420........ .
 
   342.......350.........360.........370.........380.........390.........400.
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Query Sequence  YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF
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Template Sequence  DIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDED. . . . . . KA
Template Known Secondary structure  TT
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   430.........440.........450......... 460.........470......... 480.
 
   402.......410.........420.........430.........440.........450....
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Query Sequence  PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK
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Template Sequence  VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DRWEI. . . . ILELMKDVER
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TTT
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   482.......490.........500.........510.... ..... 520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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