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Job Description | P00520 | Confidence | 99.61% | Date | Wed Jul 10 14:19:35 BST 2013 |
Rank | 421 | Aligned Residues | 80 |
% Identity | 24% | Template | c3or8A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt6; |
PDBTitle: a tandem sh2 domain in transcription elongation factor spt6
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Resolution | 1.60 Å |
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124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | H | S | W | Y | H | G | P | V | S | R | N | A | A | E | Y | L | L | S | S | G | I | N | G | S | F | L | V | R | E | S | E | S | S | P | G | Q | R | S | I | S | L | R | . |
Y | E | G | R | V | Y | H | Y | R | I | N | T | A | S | D | . |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | H | P | Y | Y | F | . |
P | F | N | G | K | Q | A | E | D | Y | L | R | S | K | E | R | G | D | F | V | I | R | Q | S | S | R | G | D | D | H | L | A | I | T | W | K | L | D | K | D | L | F | Q | H | V | D | I | Q | E | L | E | K | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
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182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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G | K | L | Y | V | S | S | E | S | R | F | N | T | L | A | E | L | V | H | H | H | S | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | P | L | A | L | G | K | V | L | V | V | E | G | Q | R | Y | H | D | L | D | Q | I | I | V | E | Y | L | Q |
Template Known Secondary structure |   |
S | T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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