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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank19Aligned Residues277
% Identity19%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å
Model Dimensions (Å)X:66.163 Y:48.712 Z:45.574

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270......... 280.........290
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME. . . . VEEFLKEAAVM
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Template Sequence  QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL
Template Known Secondary structure  S


GGG
SSSTTT

TT
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   180.........190.........200.........210.........220.........230.........
 
   291........300.........310.........320.........330 .........340........
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Query Sequence  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC. . NRQEVSAVVLLYMATQIS
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Template Sequence  AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV
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TTB


SS


TTS
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S

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   240.........250.........260.........270.........280.........290.........
 
   349350.........360.........370.........380.........390.........400........
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Query Sequence  SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP
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Template Sequence  SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG. YAGTPGFMAP
Template Known Secondary structure  TT




GGG
TTS



TT


TT


B

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S
TTTS
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   300.........310.........320.........330.........340........ .350........
 
   409410.........420.........430.........440... ......450.........460....
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Query Sequence  ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI. . . . DLSQVYELLEKDYRMERPEGC
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Template Sequence  ELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQA. VTYPDKF
Template Known Secondary structure  TT

B
T.SS
SSS
TT





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   359360.........370.........380.... .....390.........400......... 410......
 
   465....470.........480.... .....490.........500.........510.........
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Query Sequence  PEKVYELMRACWQWNPSDRP. . . . . SFAEIHQAFETMFQESSISDEVEKELGKRGTRGGA
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Template Sequence  SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH. . . . . . . PLFRDISWRQLEAGMLTPPF
Template Known Secondary structure 
S
SSGGGS


BTTBSTTGGGS.......GGGTT

T
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   417..420.........430.........440......... 450.........460.........
 
   520.
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Query Sequence  GS
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Template Sequence  VP
Template Known Secondary structure 

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   470.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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