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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank323Aligned Residues220
% Identity13%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.........270.... .....280.........
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Query Sequence  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . . . . . . . . . . . EDTMEVEEFLKEAAV
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Template Sequence  SVGSRIGVGKESDIMIVAD. EKGKQKVLKIHRLGRISFRTVKRDYLRNRSTGSWMYLSRL
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   97..100.........110..... ....120.........130.........140.........150.....
 
   290.........300.........310.. .......320.........330.........340...
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Query Sequence  MKEIKHPNLVQLLGVCTREPPFY. . . . . . IITEFMTYGNLLDYLRECNRQEVSAVVLLYM
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Template Sequence  AAIKEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQV. . . . . . . . SSVPDPASL
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   158.160.........170.........180.........190.........200 .........
 
   344.....350.........360.........370.........380.........390.........400...
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Query Sequence  ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI
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Template Sequence  YADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIID. . . . FPQMVSMD
Template Known Secondary structure  TT
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   210.........220.........230.........240.........250....... ..260.....
 
   404.....410.........420.........430.........440.........450.........460.
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Query Sequence  KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP. .
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Template Sequence  HPNAEMYFDR. . . . . . . DVQCIKRFFERRFH. FVSTTPGPFYKDAKKTVGKDGAKRLDAA
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   266...270..... ....280......... 290.........300.........310.......
 
   462.......470.........480...
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Query Sequence  . . . EGCPEKVYELMRACWQWNPSDR
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Template Conservation 
           

        
 
Template Sequence  LEASGFTKKMAKDLEAAIREQQESR
Template Known Secondary structure  TGGGT

TT
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   318.320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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