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Job DescriptionP00520
Confidence99.72%DateWed Jul 10 14:19:35 BST 2013
Rank414Aligned Residues86
% Identity23%Templatec3gxxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160....... ..170........ .180
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Query Sequence  KHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRY. EGRVYHYRINT. . AS
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Template Sequence  NHPYYF. PFNGKQAEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQEXEKE
Template Known Secondary structure  T
TTB
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   910.... .....20.........30.........40.........50.........60.......
 
   181........190.........200.........210
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Query Sequence  DGKLYVSSESRFNTLAELVHHHSTVADGLI
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Template Sequence  XGKVLVVEGQRYHDLDQIIVEYLQNKIRLL
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   72.......80.........90.........100.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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