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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank41Aligned Residues261
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG
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Template Sequence  YFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFD
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   57..60.........70.........80.........90 .........100.........110....
 
   304.....310.........320.........330.........340.........350.........360...
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Query Sequence  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD
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Template Sequence  VFEDKKYFYLVTEFYEGGELFEQIINRHK. . FDECDAANIMKQILSGICYLHKHNIVHRD
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   133......140.........150.........160. ........170.........180.........190
 
   364.....370. ........380.........390.........400.........410.........420
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Query Sequence  LAARNCLV. . . GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS
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Template Sequence  IKPENILLENKNSLLNIKIVDFGLSSFFSKD. . YKLRDRLGTAYYIAPEVLKK. KYNEKC
Template Known Secondary structure 
SGGGSSTT

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   191........200.........210.........220. ........230.........240. ......
 
   421........430.........440.........450.........460.. .......470.......
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Query Sequence  DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE. . . GCPEKVYELMRACWQ
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Template Sequence  DVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLT
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   248.250.........260. ........270.........280.........290.........300......
 
   478.480.........490.........500.........510..
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Query Sequence  WNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK
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Template Sequence  YDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCG
Template Known Secondary structure  SSTTTS

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GGG
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   307..310.........320.........330.........340.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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