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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank5Aligned Residues427
% Identity40%Templatec1k9aB_
PDB info PDB header:transferaseChain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution
Resolution2.50 Å
Model Dimensions (Å)X:68.797 Y:71.241 Z:55.623

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.... .....110......
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Query Sequence  PSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQT. KNGQGWVPSNYI
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Template Sequence  ASWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYV
Template Known Secondary structure  S


TT
SS
B

SSTTB

B
TT

SSTT
TTS
GGG
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   6...10.........20.........30.........40.........50.........60.....
 
   117..120. ........130.........140.........150.........160.........170
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Query Sequence  TPVNS. . . . . . LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGR
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Template Sequence  QKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGK
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SSSS
TTB

S

T
S

TT

SSSTT
TT
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   66...70.........80.........90.........100.........110.........120.....
 
   171........180.........190.........200.........210.........220.........230
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Query Sequence  VYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYGVSP
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Template Sequence  VEHYRIMY. HASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDE. F
Template Known Secondary structure  .TTSSSSS
BSS

TTSSS


SB


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   126...130... ......140.........150.........160.........170.........180.. .
 
   231........240.........250.........260.........270.........280.........290
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Query Sequence  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM
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Template Sequence  YRSGWALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKND. ATAQAFLAEASVM
Template Known Secondary structure  TT
B

GGG

TTT..TSS
.TTS
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   184.....190.........200.........210..... ....220....... ..230.........240
 
   291........300......... 310.........320.........330.........340.........
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Query Sequence  KEIKHPNLVQLLGVCTREP. PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS
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Template Sequence  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE
Template Known Secondary structure  TT


TTB


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TT
B
TTT

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   241........250.........260.........270.........280.........290.........300
 
   350.........360.........370.........380.........390.........400.........
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Query Sequence  AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE
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Template Sequence  AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK. . . . . . . . . . EAGKLPVKWTAPE
Template Known Secondary structure  TT
B
S


GGG
TT




TT
B..........





TTTS
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   301........310.........320.........330....... ..340.........350
 
   410.........420.........430.........440.........450.........460.........
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Query Sequence  SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY
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Template Sequence  ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY
Template Known Secondary structure  TTT


TTT

SSTTS
TTTTTT





TT

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   357..360.........370.........380.........390.........400.........410......
 
   470.........480.........490.........
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Query Sequence  ELMRACWQWNPSDRPSFAEIHQAFETMFQE
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Template Sequence  DVMKNCWHLDAATRPTFLQLREQLEHIRTH
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SSGGGS

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   417..420.........430.........440......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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