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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank217Aligned Residues253
% Identity26%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270..... ....280.........290.
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMK
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Template Sequence  LELQ. KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMK
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   4... ..10.........20.........30.........40.........50.........60..
 
   292.......300.........310.........320.........330..
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Query Sequence  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR. . . . . . . . . . . . . . . . . . .
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Template Sequence  KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP
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   66...70.........80.........90.........100.........110.........120.....
 
   333......340.........350.........360.........370.....
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Query Sequence  . . . . . . . . . . . . . . . . . QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH
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Template Sequence  ECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK
Template Known Secondary structure  S




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   126...130.........140.........150.........160.........170.........180.....
 
   376 ...380.........390.........400.........410. ........420.........430.
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Query Sequence  L. . VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL. . AYNKFSIKSDVWAFGVLLWE
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Template Sequence  SFEIKLVDFGLSKEFYKLNNG. . . . . AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL
Template Known Secondary structure  S




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   188.190.........200........ .210.........220.........230.........240..
 
   432.......440.........450..... ....460.........470.........480........
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Query Sequence  IATYGMSPYPGIDLSQVYELLEKD. . . YRMERPEGCPEKVYELMRACWQWNPSDRPSFAE
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Template Sequence  LLM. GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMR
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   251.. ......260.........270.........280.........290.........300.........
 
   489490....
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Query Sequence  IHQAFE
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Template Sequence  ALQHPW
Template Known Secondary structure  S
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   310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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