Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank49Aligned Residues264
% Identity39%Templatec3kulB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ephrin type-a receptor 8; PDBTitle: kinase domain of human ephrin type-a receptor 8 (epha8)
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260....... ..270.... .....280.........290
Predicted Secondary structure 











...
..

Query SS confidence 































. . .






. .















Query Sequence  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT. . . VAVKTLK. . EDTMEVEEFLKEAAVM
Query Conservation              

 
 

 
           ...



   ..           
    
Alig confidence 































...






..















Template Conservation 

    
 
   

 
 

 

 
           



                
   
Template Sequence  EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM
Template Known Secondary structure  B

GGGTTTTT
SS

Template Predicted Secondary structure 















Template SS confidence 



























































   629630.........640.........650.........660.........670.........680........
 
   291........300.........310.........320.........330.........340.........350
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
Query Conservation    
 
 


              
 
    
 
   
                  

   
Alig confidence 






































.



















Template Conservation    
 




              
 
      
      .                    
Template Sequence  GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT. HDGQFTIMQLVGMLRGVGAG
Template Known Secondary structure  TT


TTB


GGG



TT
BT.STT
S
Template Predicted Secondary structure 
























.





Template SS confidence 



























































   689690.........700.........710.........720....... ..730.........740.......
 
   351........360.........370.........380.........390.........400.........410
Predicted Secondary structure 































Query SS confidence 



























































Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
Query Conservation 
  

    





  
 
       

 


 
                     


 
Alig confidence 



























































Template Conservation                                
                             
Template Sequence  MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAATTGGKIPIRWTAPEA
Template Known Secondary structure  TT
S

SGGG
TT




TT


SSTT








GGGS
Template Predicted Secondary structure 













































Template SS confidence 



























































   748.750.........760.........770.........780.........790.........800.......
 
   411........420.........430.........440.........450.........460.........470
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE
Query Conservation            



 
  
 
    
  
                               
Alig confidence 



























































Template Conservation            






 



 
 
  
            
               
  
Template Sequence  IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQ
Template Known Secondary structure 



TTT

TTTTS
TT





TT

Template Predicted Secondary structure 

























Template SS confidence 



























































   810.........820.........830.........840.........850.........860.........
 
   471........480.........490.........500
Predicted Secondary structure 





Query SS confidence 





























Query Sequence  LMRACWQWNPSDRPSFAEIHQAFETMFQES
Query Conservation 
        
  

                
Alig confidence 





























Template Conservation 

  

  

  


   

  
  
   
Template Sequence  LMLDCWHKDRAQRPRFSQIVSVLDALIRSP
Template Known Secondary structure  T
SSGGGS



Template Predicted Secondary structure 









Template SS confidence 





























   870.........880.........890.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D