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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank105Aligned Residues245
% Identity23%Templatec2wqmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230......... 240.........250.........260.........270.... .....280....
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Query Sequence  PNYDKWEMER. TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . . EDTMEVEEFL
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Template Sequence  ALRPDMGYNTLANFRIEKKIGRG. . SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI
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GGGTTSSGGG

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   21........30.........40... ......50.........60.........70........
 
   285....290.........300.........310.........320.........330 .........340..
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Query Sequence  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC. . NRQEVSAVVLLY
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Template Sequence  KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK
Template Known Secondary structure  T


TTB

TT


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   81........90.........100.........110.........120.........130.........140
 
   343......350.........360.........370.........380.........390.........400..
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Query Sequence  MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP
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Template Sequence  YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDL. . . . . . . . . . . . . . . . . . . T
Template Known Secondary structure  TT






GGG
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   141........150.........160.........170.........180 .
 
   403......410.........420.........430.........440.........450.........460..
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Query Sequence  IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE
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Template Sequence  PYYMSPERIHENGYNFKSDIWSLGCLLYEMAA. LQSPFYMNLYSLCKKIEQCDYPPLPSD
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TT



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   200.........210.........220.........230. ........240.........250........
 
   463......470.........480.........490......
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Query Sequence  GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM
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Template Sequence  HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM
Template Known Secondary structure  TS
T
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   262.......270.........280.........290.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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