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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank220Aligned Residues222
% Identity26%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.... .....280.........290.....
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . . EDTMEVEEFLKEAAVMKEIKH
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN
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TTTTT

TTTT
STT


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   37..40.........50.........60.........70.........80.........90......
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE
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Template Sequence  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR. . RKAVTEPEARYFMRQTIQGVQYLH
Template Known Secondary structure  TTB


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TT
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   97..100.........110.........120.........130 .........140.........150....
 
   356...360.........370.........380.........390.........400.........410.....
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Query Sequence  KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK
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Template Sequence  NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




GGG
TT




TT

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   155....160.........170.........180.......
 
   416...420.........430.........440.........450.........460.........470.....
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Query Sequence  FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC
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Template Sequence  HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRM
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T.SS
TT

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TTS
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   214.....220.........230.. .......240.........250... ......260.........270.
 
   476...480.........490..
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Query Sequence  WQWNPSDRPSFAEIHQA
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Template Sequence  LHADPTLRPSVAELLTD
Template Known Secondary structure  T
SSGGGS

TS
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   272.......280........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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