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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank186Aligned Residues236
% Identity24%Templatec3i6uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260.........270........ .280.........290.......
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Query Sequence  RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM. EVEEFLKEAAVMKEIKHPN
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Template Sequence  RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGLNVETEIEILKKLNHPC
Template Known Secondary structure  TT
SSSTTT

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TT
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   217..220.........230.........240.........250.........260.........270......
 
   298.300.........310.........320.........330.........340.........350.......
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Query Sequence  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK
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Template Sequence  IIKIKNFFDAEDY. YIVLELMEGGELFDKV. . VGNKRLKEATCKLYFYQMLLAVQYLHEN
Template Known Secondary structure  B



SS.

TT
BGGGGT..SSS



T
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   285....290....... ..300.........310... ......320.........330.........340.
 
   358.360.........370.. .......380.........390.........400.........410....
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Query Sequence  NFIHRDLAARNCLVG. . . ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG. . . . . . . . . . . . . . PTYLAPEVLVA
Template Known Secondary structure  T


S


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TT

TTTT

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   342.......350.........360.........370...... ...380.......
 
   415....420.........430.........440...... ...450.........460. ........470
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Query Sequence  KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS. QVYELLEKDYRMERP. . . EGCPEKVYE
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Template Sequence  GYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD
Template Known Secondary structure  TT.SS
SS


SSS

TT




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   403......410.........420.. .......430.........440.........450.........460.
 
   471........480.........490..
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Query Sequence  LMRACWQWNPSDRPSFAEIHQA
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Template Sequence  LVKKLLVVDPKARFTTEEALRH
Template Known Secondary structure  S
SSTTTS

S
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   462.......470.........480...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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