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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank126Aligned Residues251
% Identity22%Templatec2vrxB_
PDB info PDB header:cell cycle/transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 12-a; PDBTitle: structure of aurora b kinase in complex with zm447439
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240...... ...250.........260.........270.... .....280.........290
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Query Sequence  EMERTDITMKH. KLGGGQYGEVYEGVWKKYSLTVAVKTLK. . . . EDTMEVEEFLKEAAVM
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Template Sequence  EMPKRKFTIDDFDIGRPLGGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ
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GGG


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   82.......90.........100.........110.........120.........130.........140.
 
   291........300.........310.........320.........330.........340.........350
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Query Sequence  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA
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Template Sequence  SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK. . HGRFDEQRSATFMEELADA
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   146...150.........160.........170.........180.... .....190.........200...
 
   351........360.........370.........380.........390.........400.........410
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Query Sequence  MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES
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Template Sequence  LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR. . . . MCGTLDYLPPEM
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SGGG
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   204.....210.........220.........230.........240....... ..250.........
 
   411........420.........430.........440.........450.........460.........470
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Query Sequence  LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE
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Template Sequence  IEGKTHDEKVDLWCAGVLCYEFLV. GMPPFDSPSHTETHRRIVNV. DLKFPPFLSDGSKD
Template Known Secondary structure  TT

B
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   261........270.........280.... .....290.........300.... .....310........
 
   471........480.........490....
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Query Sequence  LMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  LISKLLRYHPPQRLPLKGVMEHPW
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   319320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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