Return to main results Retrieve Phyre Job Id

Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank25Aligned Residues267
% Identity42%Templatec2ivsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.. .......270...... ...280.....
Predicted Secondary structure 











.....





..
Query SS confidence 





























. . . . .













. .








Query Sequence  DKWEMERTDITMKHKLGGGQYGEVYEGVWK. . . . . KYSLTVAVKTLKED. . TMEVEEFLK
Query Conservation                 

 
 

 
      .....     



     ..         
Alig confidence 





























.....













..








Template Conservation      
          

 
 

 


              



 
              
Template Sequence  PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS
Template Known Secondary structure  TTTB

GGG
SSSTGGG
SS

TT

Template Predicted Secondary structure 





















Template SS confidence 



























































   715....720.........730.........740.........750.........760.........770....
 
   286...290.........300.........310.........320.........330.. .......
Predicted Secondary structure 
















......



Query SS confidence 














































. . . . . .






Query Sequence  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR. . . . . . QEVSAVV
Query Conservation 
      
 
 


              
 
    
 
   
     ......       
Alig confidence 














































......






Template Conservation 

     
 




             

 
    
 
   
                  
Template Sequence  EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLRALTMGD
Template Known Secondary structure  TT


TTB


SSSS


TT
BTTTSTT


Template Predicted Secondary structure 




































Template SS confidence 



























































   775....780.........790.........800.........810.........820.........830....
 
   340.........350.........360.........370.........380....... ..390........
Predicted Secondary structure 


















.






Query SS confidence 















































.










Query Sequence  LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL. MTGDTYTAHAG
Query Conservation        

   
  

    





  
 
       

 


 
  .           
Alig confidence 















































.










Template Conservation                 
        
    
        

 


                
Template Sequence  LISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQ
Template Known Secondary structure  TT



SGGGTTT


TT

TTTS

SS
Template Predicted Secondary structure 










































Template SS confidence 



























































   851........860.........870.........880.........890.........900.........910
 
   399400.........410.........420.........430.........440.........450........
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM
Query Conservation          


           



 
  
 
    
  
                   
Alig confidence 



























































Template Conservation           

          






 






 
               
      
Template Sequence  GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM
Template Known Secondary structure 

S
GGG



TTS

SSTT

GGGTT


Template Predicted Secondary structure 





































Template SS confidence 



























































   911........920.........930.........940.........950.........960.........970
 
   459460.........470.........480.........490.........
Predicted Secondary structure 











Query SS confidence 








































Query Sequence  ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE
Query Conservation              
        
  

               
Alig confidence 








































Template Conservation           
  

  

  

  


  


  
  
   
Template Sequence  ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK
Template Known Secondary structure 


TT

T
SSGGGS

T
Template Predicted Secondary structure 














Template SS confidence 








































   971........980.........990.........1000.........1010.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D