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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank317Aligned Residues233
% Identity29%Templatec2oidA_
PDB info PDB header:transferaseChain: A: PDB Molecule:interleukin-1 receptor-associated kinase 4; PDBTitle: crystal structure of irak4 kinase domain complexed with2 amppnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270.........280.........290....
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Query Sequence  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK
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Template Sequence  NNFDERPISVGGNKGEGGFGVVYKGYVN. . NTTVAVK. . . . . . . . . . . . . KEIKVMAKCQ
Template Known Secondary structure  TTT

S
GGGTS


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   178.180.........190.........200..... ....210.. .......220..
 
   295....300.........310.........320.........330.. .......340.........350...
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Query Sequence  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR. QEVSAVVLLYMATQISSAMEY
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Template Sequence  HENLVELLGFS. . . . . . CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF
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TTB


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   242.......250.. .......260.........270.........280.........290.....
 
   354.....360.........370.........380.........390.........400.........410...
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Query Sequence  LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY
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Template Sequence  LHENHHIHRDIKSANILLDEAFTAKISDFGLAR. . . . . . . ASEVMRIVGTTAYMAPEALR
Template Known Secondary structure  TT
S

SGGG
TT




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TTTTT
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   302.......310.........320.........330.... .....340.........350....
 
   414.....420.........430.........440..... ....450.........
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Query Sequence  NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL. . . . . . . . . . . . . . SQVYELLEKDYRME
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Template Sequence  GEITPKSDIYSFGVVLLEIIT. GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND
Template Known Secondary structure  T


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SB
TTSSSSBGGGTTSS
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   362.......370.........380.. .......390.........400.........410.........420
 
   460.........470.........480.........490......
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Query Sequence  RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM
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Template Sequence  ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM
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T
SSTTTS

T
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   421........430.........440.........450.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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