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Job DescriptionP00520
Confidence100.00%DateWed Jul 10 14:19:35 BST 2013
Rank205Aligned Residues248
% Identity21%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.. ......
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Query Sequence  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE. IKHPNL
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Template Sequence  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS. . . KRDPTEEIEILLRYGQHPNI
Template Known Secondary structure  TT
SSTTTTTT...T

TTTSTTB
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   420.........430.........440.........450...... ...460.........470......
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN
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Template Sequence  ITLKDVYDDGKYVYVVTELMKGGELLDKILR. . QKFFSEREASAVLFTITKTVEYLHAQG
Template Known Secondary structure 


SS


S
BT..
TT

TT
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   477..480.........490.........500....... ..510.........520.........530....
 
   359360.........370..... ....380.........390.........400.........410....
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Query Sequence  FIHRDLAARNCLVGENH. . . . LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT. PCYTANFVAPEVLERQ
Template Known Secondary structure 
S


GGGSSSS

GGG


TT

B
TTS
B

.SS


S


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   535....540.........550.........560.........570....... ..580.........590...
 
   415....420.........430.........440... ......450.........460. .......
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Query Sequence  KFSIKSDVWAFGVLLWEIATYGMSPYPGI. . . DLSQVYELLEKDYRMERP. . . EGCPEKV
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Template Sequence  GYDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA
Template Known Secondary structure  .SS
SS
SSTTS
T



SSTS
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   594.....600.........610... ......620.........630.........640.........650..
 
   469470.........480.........490....
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Query Sequence  YELMRACWQWNPSDRPSFAEIHQAFE
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Template Sequence  KDLVSKMLHVDPHQRLTAALVLRHPW
Template Known Secondary structure  S
SSTTTS

TS
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   653......660.........670........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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