Job Description A2A3V1 Confidence 96.11% Date Tue Jul 30 13:01:13 BST 2013 Rank 16 Aligned Residues 65 % Identity 29% Template c3sdeB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:non-pou domain-containing octamer-binding protein; PDBTitle: crystal structure of a paraspeckle-protein heterodimer, pspc1/nono Resolution 1.90 Å Model Dimensions (Å) X:37.506 Y:36.824 Z:33.611

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		141	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		D	K	G	P	D	S	.	.	.	.	I	Y	F	E	G	L	P	C	K	W	F	A	P	K	G	S	S	G	E	K	P	C	E	E	I	L	R	V	V	F	E	S	F	G	K	I	K	N	V	D	I	P	M	L	D	P	Y	R	E	V
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.											.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		G	E	K	T	F	T	Q	R	S	R	L	F	V	G	N	L	P	P	D	I	.	.	.	.	.	.	.	.	.	.	.	T	E	E	E	M	R	K	L	F	E	K	Y	G	K	A	G	E	V	F	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S		G	G	G						S			T	T		.	.	.	.	.	.	.	.	.	.	.										G	G	G	S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.												.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	G	G	S	F	G	G	L	N	F	G	L	Q	T	F	E	A	F	I	Q	Y	Q	E	S	T	D	F	I	K	A	M	E	S	L	R	G	M	K	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	H	K	D	K	G	F	G	F	I	R	L	E	T	R	T	L	A	E	I	A	K	V	E	L	D	N	M	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T	T	T							S	S												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D