Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence94.32%DateTue Jul 30 13:01:13 BST 2013
Rank116Aligned Residues60
% Identity37%Templatec2dguA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein q; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein q
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.........190.........200...
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Query Sequence  PDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFG
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Template Sequence  VKVLFVRNLA. . . . . . . . . . . NTVTEEILEKAFSQFGKLERVKKL. . . . . . . K. . . . . . .
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S

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   337..340...... ...350.........360.........370 .
 
   204.....210.........220.........230......
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Query Sequence  GLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . DYAFIHFDERDGAVKAMEEMNGKDL
Template Known Secondary structure  ........S
SSTT
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   372.......380.........390......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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