Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence93.43%DateTue Jul 30 13:01:13 BST 2013
Rank140Aligned Residues69
% Identity20%Templated1l3ka1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.........200.
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  KGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGS
Query Conservation                                                              
Alig confidence 














...........





























....
Template Conservation       
 
 


   ...........    
   
   
                 ....
Template Sequence  EQLRKLFIGGLSFET. . . . . . . . . . . TDESLRSHFEQWGTLTDCVVMRDPNTKRSR. . . .
Template Known Secondary structure  GGGGS

TT
...........
GGGS

TTT

....
Template Predicted Secondary structure 










...........

















....
Template SS confidence 



























































   11........20..... ....30.........40.........50.....
 
   202.......210.........220.........230......
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  FGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
Query Conservation                                     
Alig confidence  ..........

















.





Template Conservation  ..........
 


 
     
  

 .     
Template Sequence  . . . . . . . . . . GFGFVTYATVEEVDAAMN. ARPHKV
Template Known Secondary structure  ..........SS.T
S
Template Predicted Secondary structure  ..........



.


Template SS confidence 


































   56...60.........70... ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D