 |
Job Description | A2A3V1 | Confidence | 95.30% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 63 | Aligned Residues | 64 |
% Identity | 27% | Template | c2dnqA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:rna-binding protein 4b; |
PDBTitle: solution structure of rna binding domain 1 in rna-binding2 protein 30
|
Resolution | UNK |
|
 |
  |   |
140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  | . |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | D | K | G | P | D | S | . |
I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T |
Query Conservation |   |
  |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
| . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . |   | . | . |
Template Sequence |   |
S | G | S | S | G | M | V | K | L | F | I | G | N | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | E | A | T | E | Q | E | I | R | S | L | F | E | Q | Y | G | K | V | L | E | C | D | I | I | . |
. |
. |
. |
. |
. |
. |
K | . |
. |
Template Known Secondary structure |   |
S |
| S | S |
|
|  |  |  |  |  |  | S |
|
| . | . | . | . | . | . | . | . | . | . | . | S | S |
|
|  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | T | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |
| . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|