Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.45%DateTue Jul 30 13:01:13 BST 2013
Rank55Aligned Residues69
% Identity16%Templatec2rneA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170.........180.........190.........200..
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Query Sequence  GPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSF
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Template Sequence  NHFHVFVGDLSPEI. . . . . . . . . . . TTEDIKAAFAPFGRISDARVVKDMATGKSK. . . . .
Template Known Secondary structure  SSS

TT
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GGG


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   95....100........ .110.........120.........130........
 
   203......210.........220.........230......
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Query Sequence  GGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . GYGFVSFFNKWDAENAIQQMGGQWL
Template Known Secondary structure  .........SSTT
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   139140.........150.........160...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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