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Job Description | A2A3V1 | Confidence | 86.05% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 208 | Aligned Residues | 59 |
% Identity | 17% | Template | c2vopA_ |
PDB info |
PDB header:rna-binding protein | Chain: A: PDB Molecule:lupus la protein; |
PDBTitle: crystal structure of n-terminal domains of human la protein2 complexed with rna oligomer auuuu
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Resolution | 2.8 Å |
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144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | D | S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G | S | F | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | R | S | V | Y | I | K | G | F | P | T | D | A | . |
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T | L | D | D | I | K | E | W | L | E | D | K | G | Q | V | L | N | I | Q | M | R | R | T | L | H | K | A | F | K | . |
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Template Known Secondary structure |   |
T | T |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
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. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | |
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204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | L | N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | S | I | F | V | V | F | D | S | I | E | S | A | K | K | F | V |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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