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Job Description | A2A3V1 | Confidence | 93.78% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 129 | Aligned Residues | 76 |
% Identity | 22% | Template | c2fc9A_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:ncl protein; |
PDBTitle: solution structure of the rrm_1 domain of ncl protein
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Resolution | UNK |
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132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | E | G | A | E | E | Q | D | H | D | K | G | P | D | S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | G | S | S | G | N | S | T | W | S | G | E | S | K | T | L | V | L | S | N | L | S | Y | S | . |
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A | T | E | E | T | L | Q | E | V | F | E | K | A | T | F | I | K | V | P | Q | N | Q | N | G | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
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. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
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192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | Y | R | E | V | M | T | G | G | S | F | G | G | L | N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | K | . |
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G | Y | A | F | I | E | F | A | S | F | E | D | A | K | E | A | L | N | S | C | N | K | R | E | I |
Template Known Secondary structure |   |
B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
52 | . | |
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. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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