Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence86.05%DateTue Jul 30 13:01:13 BST 2013
Rank208Aligned Residues59
% Identity17%Templatec2vopA_
PDB info PDB header:rna-binding proteinChain: A: PDB Molecule:lupus la protein; PDBTitle: crystal structure of n-terminal domains of human la protein2 complexed with rna oligomer auuuu
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.........190.........200...
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Query Sequence  PDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFG
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Template Sequence  NRSVYIKGFPTDA. . . . . . . . . . . TLDDIKEWLEDKGQVLNIQMRRTLHKAFK. . . . . . .
Template Known Secondary structure  TT


TT
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TTS


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   110.........120.. .......130.........140.........150.
 
   204.....210.........220........
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Query Sequence  GLNFGLQTFEAFIQYQESTDFIKAM
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Template Sequence  . . . . . . . . GSIFVVFDSIESAKKFV
Template Known Secondary structure  ........SS
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   152.......160........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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