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Job Description | A2A3V1 | Confidence | 95.62% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 41 | Aligned Residues | 88 |
% Identity | 24% | Template | c2f3jA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:rna and export factor binding protein 2; |
PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155).
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Resolution | UNK |
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141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | K | G | P | D | S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | E | T | G | A | K | L | L | V | S | N | L | D | F | G | V | S | . |
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D | A | D | I | Q | E | L | F | A | E | F | G | T | L | K | K | A | A | V | D | Y | D | R | S | G | R | S | L | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
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. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
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201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | F | G | G | L | N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L | M | L | K | G | D | D | G | K | A | L | A | C | N | I | K | V | M | F | D | T | T | K | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | T | A | D | V | H | F | E | R | R | A | D | A | L | K | A | M | K | Q | Y | K | G | V | P | L | . |
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D | G | R | P | M | D | I | Q | L | V | A | S | Q | I | D | L | E | H |
Template Known Secondary structure |   |
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| B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
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. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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