Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.23%DateTue Jul 30 13:01:13 BST 2013
Rank67Aligned Residues69
% Identity23%Templatec2dh9A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180.........190.........200
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Query Sequence  DKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGG
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Template Sequence  SSGSSGIFVRNLPFDF. . . . . . . . . . . TWKMLKDKFNECGHVLYADIKMENGKSK. . . . .
Template Known Secondary structure 
S


S

TT
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TTS


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   534.....540......... 550.........560.........570.......
 
   201........210.........220.........230......
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Query Sequence  SFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . GCGVVKFESPEVAERACRMMNGMKL
Template Known Secondary structure  ...........SSSTTT

T
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   578.580.........590.........600..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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