Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence91.90%DateTue Jul 30 13:01:13 BST 2013
Rank178Aligned Residues80
% Identity28%Templatec3md3A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the first two rrm domains of yeast poly(u)2 binding protein (pub1)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYRE. . . . . . . . . .
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Template Sequence  VLYVGNLDKAI. . . . . . . . . . . TEDILKQYFQVGGPIANIKIMIDKNKNVNYAFVEYHQS
Template Known Secondary structure  TT
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   76...80...... ...90.........100.........110.........120....
 
  
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Template Sequence  HDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDF
Template Known Secondary structure  TT
TT









TT
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   126...130.........140.........150.........160.........170.........180.....
 
   196...200.........210.........220.........230......
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Query Sequence  . . VMTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  PSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDL
Template Known Secondary structure  TT
TTT

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TT
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   186...190.........200.........210.........220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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