Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence72.31%DateTue Jul 30 13:01:13 BST 2013
Rank224Aligned Residues86
% Identity16%Templatec2avxA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:regulatory protein sdia; PDBTitle: solution structure of e coli sdia1-171
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.........150.........160. ........170......
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Query Sequence  HDKGPDSIYFEGLPCKWFAPKG. . . . . . . . . . . . . . . . . . . . . . . SSGEKPCEEILRVVF
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Template Sequence  PFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAA
Template Known Secondary structure  TTS




TTGGGT
GGG
TTT
TTS

TTTTSS
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   51........60.........70.........80.........90.........100.........110
 
   177..180.........190.........200.........210. ........220......
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Query Sequence  ESFGKIKNVDIPMLDPYREVMTGGSFGGLNFGLQT. . . . . . . . . . FEAFIQYQESTDFIK
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Template Sequence  RAHGLRRGVTQYLMLP. . . . . . ERALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMA
Template Known Secondary structure  T



T......T

S




SS

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   111........120...... ...130.........140.........150.........160....
 
   227..230..
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Query Sequence  AMESLR
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Template Sequence  LM. RLN
Template Known Secondary structure  .
Template Predicted Secondary structure  .
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   165. ...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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