Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence89.69%DateTue Jul 30 13:01:13 BST 2013
Rank198Aligned Residues80
% Identity25%Templatec2g4bA_
PDB info PDB header:rna binding protein/rnaChain: A: PDB Molecule:splicing factor u2af 65 kda subunit; PDBTitle: structure of u2af65 variant with polyuridine tract
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  RLYVGNIPFGIT. . . . . . . . . . . EEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFA
Template Known Secondary structure  S

TT

...........TT

SSSS
STTTT
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   150.........160. ........170.........180.........190........
 
   206...210
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Query Sequence  NFGLQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGAHKLFIGGLPNYLNDDQVKEL
Template Known Secondary structure  SSGGGTT
TT


SS



TTTT



TT

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   199200.........210.........220.........230.........240.........250........
 
   211........220.........230......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . TFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  LTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQL
Template Known Secondary structure  TTS

TTT
SSSTTTT
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   279280.........290.........300.........310.........320.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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