Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence82.23%DateTue Jul 30 13:01:13 BST 2013
Rank219Aligned Residues67
% Identity19%Templatec3n9uI_
PDB info PDB header:splicingChain: I: PDB Molecule:cleavage and polyadenylation specificity factor subunit 7; PDBTitle: crystal structure of the complex between the 25 kda subunit and the 592 kda subunit (rrm domain) of human cleavage factor im
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.........180.........190.........200......
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  IYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGLN
Query Conservation                                                              
Alig confidence 








...........





















........









Template Conservation 





   ........... 

  
   
   
 
    
 ........   
  

  
Template Sequence  VYVGSFSWW. . . . . . . . . . . TTDQQLIQVIRSIGVYDVVELK. . . . . . . . FAENRANGQS
Template Known Secondary structure 



TT...........

TTT




........
TTT

Template Predicted Secondary structure 






...........








........





Template SS confidence 



























































   84.....90.. .......100.........110.... .....120....
 
   207..210.........220.........230......
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  FGLQTFEAFIQYQESTDFIKAMESLRGMKL
Query Conservation                                
Alig confidence 



....





















Template Conservation 

  ....

 
     
      
 

 
Template Sequence  KGYA. . . . EVVVVHKLLELLPGKVLNGEKV
Template Known Secondary structure  ....

STT
TT
Template Predicted Secondary structure 

....





Template SS confidence 





























   125... .130.........140.........150
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D