Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence97.29%DateTue Jul 30 13:01:13 BST 2013
Rank1Aligned Residues145
% Identity14%Templatec3s01A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of a heterogeneous nuclear ribonucleoprotein l2 (hnrpl) from mus musculus at 2.15 a resolution
Resolution2.15 Å
Model Dimensions (Å)X:55.100 Y:39.722 Z:41.245

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100 .........110.........120...
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Query Sequence  EAETRSLVQILKAKLHGKII. . . . . . . . . . . . . . . . . KLNGLKTDLKVVATDAQGEWEHF
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Template Sequence  EXADGYAVDRAITHLNNNFXFGQKXNVCVSKQPAIXPGQSYGLEDGSCSYKDFSESRNNR
Template Known Secondary structure  SSTT
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B
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   422.......430.........440.........450.........460.........470.........480.
 
   124.....130.........140.........150.........160.........170.........180...
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Query Sequence  PKEKEASVIEGAEEQDHDKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIK
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Template Sequence  FST. . . . . PEQAAKNRIQHPSNVLHFFNAPLEV. . . . . . . . . . . TEENFFEICDELGVKR
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   482.. .....490.........500......... 510.........520.....
 
   184.....190.........200.........210.........220.........230.........240...
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Query Sequence  NVDIPMLDPYREVMTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDG
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Template Sequence  PTSVKVFSGRSSS. . . . . . . . . . . . . . . . . GLLEWDSKSDALETLGFLNHYQXKNPNGPY
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   526...530........ .540.........550.........560........
 
   244.....250.........260.
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Query Sequence  KALACNIKVMFDTTKHFS
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Template Sequence  PYT. . . LKLCFSTAQHAS
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   572.. .....580......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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