Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence45.23%DateTue Jul 30 13:01:13 BST 2013
Rank237Aligned Residues83
% Identity22%Templatec2exuA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription initiation protein spt4/spt5; PDBTitle: crystal structure of saccharomyces cerevisiae transcription elongation2 factors spt4-spt5ngn domain
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160..... ....170 .........180.........190
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Query Sequence  DKGPDSIYFEGLPCKWFAPKGSSGE. . . . . . . . . KPCEE. ILRVVFESFGKIKNVDIPML
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Template Sequence  GRLPAEV. VELLP. . HYKPRDGSGSATIWGVRCRPGKEKELIRKLLKKKFN. . . . . . . . .
Template Known Secondary structure  S


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   80...... ...90. ........100.........110.........120.......
 
   191........200...... ...210.........220.........230........
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Query Sequence  DPYREVMTGGSFGGLN. FGLQTFEAFIQYQESTDFIKAMESLRGMKLML
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Template Sequence  . . LDRAMGKKKLKILSIFQRDNYTGRI. YIEAPKQSVIEKFCNGVPDIY
Template Known Secondary structure  ..S
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   311........320.........330..... ....340.........350......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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