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Job Description | A2A3V1 | Confidence | 94.29% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 117 | Aligned Residues | 66 |
% Identity | 23% | Template | c1cvjF_ |
PDB info |
PDB header:gene regulation/rna | Chain: F: PDB Molecule:polyadenylate binding protein 1; |
PDBTitle: x-ray crystal structure of the poly(a)-binding protein in2 complex with polyadenylate rna
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Resolution | 2.60 Å |
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146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G | S | F | G | G | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | L | Y | V | G | D | L | H | P | D | V | . |
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T | E | A | M | L | Y | E | K | F | S | P | A | G | P | I | L | S | I | R | V | C | R | D | M | I | T | R | R | S | L | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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12 | . | . | . | . | . | . | . | 20 | . | . | |
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. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
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206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | Y | A | Y | V | N | F | Q | Q | P | A | D | A | E | R | A | L | D | T | M | N | F | D | V | I |
Template Known Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | S | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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