Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence94.54%DateTue Jul 30 13:01:13 BST 2013
Rank106Aligned Residues67
% Identity19%Templatec2la4A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: nmr structure of the c-terminal rrm domain of poly(u) binding 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190........
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Query Sequence  DHDKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMT
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Template Sequence  SAPPRVTTAYIGNIP. . . . . . . . . . . HFATEADLIPLFQNFGFILDFKHYPEKGC. . . . .
Template Known Secondary structure  TS
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   335....340......... 350.........360.........370........
 
   199200.........210.........220.........230......
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Query Sequence  GGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . . . . . CFIKYDTHEQAAVCIVALANFPF
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SSTT
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   379380.........390.........400.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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