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Job Description | A2A3V1 | Confidence | 95.66% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 37 | Aligned Residues | 66 |
% Identity | 20% | Template | c3md1B_ |
PDB info |
PDB header:rna binding protein | Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein |
PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1)
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Resolution | 1.60 Å |
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146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G | S | F | G | G | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | L | F | V | G | D | L | N | . |
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V | N | V | D | . |
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D | E | T | L | R | N | A | F | K | D | F | P | S | Y | L | S | G | H | V | M | W | D | M | Q | T | G | S | S | R | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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163 | . | . | . | . | . | . | 170 | |
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. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
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206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | Y | G | F | V | S | F | T | S | Q | D | D | A | Q | N | A | M | D | S | M | Q | G | Q | D | L |
Template Known Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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