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Job DescriptionA2A3V1
Confidence95.62%DateTue Jul 30 13:01:13 BST 2013
Rank41Aligned Residues88
% Identity24%Templatec2f3jA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:rna and export factor binding protein 2; PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155).
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180.........190.........200
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Query Sequence  DKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGG
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Template Sequence  VETGAKLLVSNLDFGVS. . . . . . . . . . . DADIQELFAEFGTLKKAAVDYDRSGRSL. . . .
Template Known Secondary structure 
TT



S


...........TS

S


TTSS
S....
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   71........80....... ..90.........100.........110.....
 
   201........210.........220.........230.........240.........250.........
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Query Sequence  SFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFDTTKH
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Template Sequence  . . . . . . . . . . . GTADVHFERRADALKAMKQYKGVPL. . . . . DGRPMDIQLVASQIDLEH
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S
STT
B
.....SSSB
SSGGGG

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   116...120.........130.........140 .........150........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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