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Job DescriptionA2A3V1
Confidence93.49%DateTue Jul 30 13:01:13 BST 2013
Rank136Aligned Residues74
% Identity20%Templatec3thtB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150..... ....160.........170.........180.........190.........200.
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Query Sequence  GPDSIYFEGLPCK. WFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGS
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Template Sequence  RHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPY. . . . . . . .
Template Known Secondary structure  TTTT



SS

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SGGGT

TTS


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   31........40.........50.........60.........70.........80..
 
   202.......210.........220.........230......
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Query Sequence  FGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . . SFARYRTTEESKRAYVTLNGKEV
Template Known Secondary structure  ............SSTTT
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   83......90.........100.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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