Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence94.58%DateTue Jul 30 13:01:13 BST 2013
Rank103Aligned Residues59
% Identity27%Templatec2xnqA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3; PDBTitle: structural insights into cis element recognition of non-2 polyadenylated rnas by the nab3-rrm
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  RLFIGNLP. . . . . . . . . . LKNVSKEDLFRIFSPYGHIMQINIK. . . . . . . N. . . . . . . . .
Template Known Secondary structure  S

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GGGS

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   331....... .340.........350.........360... .
 
   206...210.........220.........230......
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Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . AFGFIQFDNPQSVRDAIEESQEMNF
Template Known Secondary structure  ......SSS

TTST
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   365....370.........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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