Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.19%DateTue Jul 30 13:01:13 BST 2013
Rank71Aligned Residues71
% Identity17%Templatec2do4A_
PDB info PDB header:immune systemChain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t- PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.........150.........160.........170.........180.........190.........
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Query Sequence  HDKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTG
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Template Sequence  TSLEKHKLFISGLPFSCT. . . . . . . . . . . KEELEEICKAHGTVKDLRLVTNRAGKPK. . .
Template Known Secondary structure  S



S
S

TT

...........TTTS

TTS
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   796...800.........810... ......820.........830.........840.
 
   200.........210.........220.........230......
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Query Sequence  GSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . . GLAYVEYENESQASQAVMKMDGMTI
Template Known Secondary structure  ............SSTTS
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   842.......850.........860......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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