|   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | L | M | I | N | V | L | L | P | E | C | I | E | P | V | R | P | F | S | N | W | . |
E | V | L | D | Q | L | K | S | L | . |
I | C | P | D | Q | F | T | T | V | R | L | S | K | S | T | K | D | F | I | R | F | E | G | E | A | E | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|   |   |   |
|   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . |
Template Sequence |   |
A | G | V | P | L | G | N | Q | S | V | L | L | R | G | V | N | D | C | V | H | V | X | K | E | L | V | N | K | L | V | K | I | R | V | R | P | Y | Y | I | Y | Q | C | D | L | S | L | G | L | E | H | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  |
| T | T | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
|
|
| B | T | T |
| G | G | G | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
|
|
|
|
|
|
|
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | L | V | Q | I | L | K | A | K | L | H | G | K | I | I | K | L | N | G | L | K | T | D | L | K | V | V | A | . |
T | D | A | Q | G | E | W | E | H | F | P | K | E | K | E | A | S | V | I | E | G | A | E | E | Q | D | H | D | K | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |
|
|   |
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Template Sequence |   |
R | T | P | V | S | K | G | I | E | I | I | E | G | L | R | G | H | T | S | G | Y | C | V | P | T | F | V | V | D | A | P | G | G | G | G | K | T | P | V | X | P | N | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | I | S | Q | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  | T | T | T | T | T | S |
| G | G | G |
|
|  |  |  |  |  |  | T | T | T | T |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
144 | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | S | I | Y | F | E | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
Template Sequence |   |
H | D | K | V | I | L | R | N |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
350 | . | . | . | . | . | . | . |
  |