Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence92.69%DateTue Jul 30 13:01:13 BST 2013
Rank163Aligned Residues68
% Identity16%Templatec2yh0A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:splicing factor u2af 65 kda subunit; PDBTitle: solution structure of the closed conformation of human u2af65 tandem2 rrm1 and rrm2 domains
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
Query Conservation                                                              
Alig confidence 










...........





























........
Template Conservation   


 


   ...........

  
   
   
 
  
            ........
Template Sequence  RLYVGNIPFGI. . . . . . . . . . . TEEAMMDFFNAQMRLGGLTQAPGNPVLAVQ. . . . . . . .
Template Known Secondary structure  S

TT
...........
T

SSSS
S........
Template Predicted Secondary structure 






...........









........
Template SS confidence 



























































   150.........160 .........170.........180.........190
 
   206...210.........220.........230...
Predicted Secondary structure 





Query SS confidence 



























Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRG
Query Conservation                              
Alig confidence  .


























Template Conservation  .        

       
  
      
Template Sequence  . INQDKNFAFLEFRSVDETTQAMAFDGI
Template Known Secondary structure  .TTTTS
SGGGTT
Template Predicted Secondary structure  .












Template SS confidence 



























   191........200.........210.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D