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Job Description | A2A3V1 | Confidence | 88.03% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 202 | Aligned Residues | 66 |
% Identity | 24% | Template | c2hgnA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; |
PDBTitle: nmr structure of the third qrrm domain of human hnrnp f
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Resolution | UNK |
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146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G | S | F | G | G | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
C | V | H | M | R | G | L | P | . |
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E | N | D | I | Y | N | F | F | S | P | L | N | P | V | R | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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290 | . | . | . | . | . | . | . | |
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. | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
. | . | . | 320 | . | . | . | . | . | . | . | . | |
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206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L | M | L | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | E | A | D | V | E | F | A | T | H | E | E | A | V | A | A | M | . |
S | K | D | R | A | N | M | Q | H | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
. | . | . | . | 350 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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