Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.67%DateTue Jul 30 13:01:13 BST 2013
Rank36Aligned Residues91
% Identity24%Templated2cq3a1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.....
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Query Sequence  EEQDHDKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYRE
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Template Sequence  GNSESKSTPKRLHVSNIP. . . . . . . . . . . FRFRDPDLRQMFGQFGKILDVEIIFNERGSK
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S

S



S

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GGGTS


TTTT
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   112.......120......... 130.........140.........150.........160
 
   196...200.........210.........220.........230.........240.........250.....
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Query Sequence  VMTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFD
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Template Sequence  . . . . . . . . . . . . . . . . GFGFVTFENSADADRAREKLHGTVVEGR. . . . . . . . . KIEVNNA
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S
TT
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   161........170.........180........ .190.....
 
   256...260..
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Query Sequence  TTKHFSE
Query Conservation    
  

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Template Conservation    
   
Template Sequence  TARVMTN
Template Known Secondary structure 
SS



Template Predicted Secondary structure 






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   196...200..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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