Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence93.00%DateTue Jul 30 13:01:13 BST 2013
Rank156Aligned Residues84
% Identity19%Templatec1fnxH_
PDB info PDB header:immune system/rnaChain: H: PDB Molecule:hu antigen c; PDBTitle: solution structure of the huc rbd1-rbd2 complexed with the2 au-rich element
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.....
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Query Sequence  KGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYRE. . . . . .
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Template Sequence  DSKTNLIVNYLPQNM. . . . . . . . . . . TQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGF
Template Known Secondary structure 

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   36...40.........50 .........60.........70.........80....
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQL
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   85....90.........100.........110.........120.........130.........140....
 
   196...200.........210.........220.........230......
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Query Sequence  . . . . . . VMTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  FSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKP
Template Known Secondary structure  TTS


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   145....150.........160.........170.........180.........190.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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