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Job Description | A2A3V1 | Confidence | 94.88% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 86 | Aligned Residues | 64 |
% Identity | 20% | Template | c2lxiA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:rna-binding protein 10; |
PDBTitle: nmr structure of the n-terminal rna binding domain 1 (rrm1) of the2 protein rbm10 from homo sapiens
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Resolution | UNK |
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145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | . |
K | I | K | N | V | D | I | P | M | L | . |
D | P | Y | R | E | V | M | T | G | G | S | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | I | V | M | L | R | M | L | P | Q | A | A | . |
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T | E | D | D | I | R | G | Q | L | Q | S | H | G | V | Q | A | R | E | V | R | L | M | R | N | K | S | S | G | Q | S | R | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | |
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203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | L | N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | F | A | F | V | E | F | S | H | L | Q | D | A | T | R | W | M | E | A | N | Q | H | S |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T | T | T |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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