Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence32.99%DateTue Jul 30 13:01:13 BST 2013
Rank253Aligned Residues41
% Identity24%Templatec1qgc1_
PDB info PDB header:virus/immune systemChain: 1: PDB Molecule:protein (virus capsid protein);PDB Fragment:residues 133-156 PDBTitle: structure of the complex of an fab fragment of a neutralizing antibody2 with foot and mouth disease virus
Resolution30.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200.........210. .......
Predicted Secondary structure 























....
Query SS confidence 

































. . . .






Query Sequence  SFGKIKNVDIPMLDPYREVMTGGSFGGLNFGLQT. . . . FEAFIQY
Query Conservation                                    ....       
Alig confidence 

































....






Template Conservation 
      













 
 
 
 


 
       



 
Template Sequence  HKGPVTRLALPYTAPHRVLATAYTGTSFNFGAVKAETITELLVRM
Template Known Secondary structure 

SS



SSSSS






S

Template Predicted Secondary structure 














Template SS confidence 












































   108.110.........120.........130.........140.........150..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D