Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence94.40%DateTue Jul 30 13:01:13 BST 2013
Rank114Aligned Residues61
% Identity21%Templatec2dnpA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:rna-binding protein 14; PDBTitle: solution structure of rna binding domain 2 in rna-binding2 protein 14
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170.........180.........190.........200..
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  GPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSF
Query Conservation                                                              
Alig confidence 










..



.........



















.......
......
Template Conservation      
 
 


..   
.........
  
   
   
        ....... ......
Template Sequence  NTWKIFVGNVS. . AACT. . . . . . . . . SQELRSLFERRGRVIECDVV. . . . . . . K. . . . . .
Template Known Secondary structure 
S

S

..TT

.........S

.......S......
Template Predicted Secondary structure 





..



.........



.......
......
Template SS confidence 



























































   77..80....... ..90. ........100.........110. .
 
   203......210.........220.........230......
Predicted Secondary structure 










Query SS confidence 

































Query Sequence  GGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
Query Conservation                                    
Alig confidence  .........
























Template Conservation  .........    
 
     
  
   
 
  
Template Sequence  . . . . . . . . . DYAFVHMEKEADAKAAIAQLNGKEV
Template Known Secondary structure  .........S
S
TT
Template Predicted Secondary structure  .........







Template SS confidence 

































   113......120.........130.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D