Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence32.59%DateTue Jul 30 13:01:13 BST 2013
Rank254Aligned Residues170
% Identity8%Templatec1y4cA_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 










Query SS confidence 



























































Query Sequence  YQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFDTTKHFSEGAIQRRNQERLKLQE
Query Conservation                                  


 

  
  

  

 
  

 
 

Alig confidence 



























































Template Conservation      
               
  
            
  
  
      

         
Template Sequence  LAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNSSS
Template Known Secondary structure  TT
S


STTTSS


Template Predicted Secondary structure 














Template SS confidence 



























































   311........320.........330.........340.........350.........360.........370
 
   278.280.........290.........300.........310.........320.........330.......
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  LEEERKKEKKREEEVAERKRKDEVRKAQEKRKKARDRRRALKERDRHRQRKEKVKTKPEA
Query Conservation 

 
 
       
  
           
             
                 
Alig confidence 



























































Template Conservation 
       

  
           
           
       
               
Template Sequence  LGIEGRSSEELLKIALQEAQKTLQQAQELAKKGGGEEQLKRALKRADRNLWAAQELAKKG
Template Known Secondary structure 
SS

TT
Template Predicted Secondary structure 
Template SS confidence 



























































   541........550.........560.........570.........580.........590.........600
 
   338.340.........350.........360.........370.........380.......
Predicted Secondary structure 
Query SS confidence 

















































Query Sequence  RQELDSSGEWEERKYLLARRRVEALRLLRVLLKKIAVWMRKEKNLKPCQT
Query Conservation    
       
           
      
                    
Alig confidence 

















































Template Conservation                        
 
                       
 
Template Sequence  GGGEELLKQALQQAQQLLRQAQELAKKGGGEELLKQALQQAQQLLQQAQE
Template Known Secondary structure 
TT

S
Template Predicted Secondary structure 
Template SS confidence 

















































   601........610.........620.........630.........640.........650
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D