Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.62%DateTue Jul 30 13:01:13 BST 2013
Rank42Aligned Residues73
% Identity25%Templatec3pgwP_
PDB info PDB header:splicing/dna/rnaChain: P: PDB Molecule:u1-a; PDBTitle: crystal structure of human u1 snrnp
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.... .....150.........160.........170.........180.........190........
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Query Sequence  HDKGP. DSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMT
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Template Sequence  PETRPNHTIYINNLNEKIKKD. . . . . . . ELKKSLYAIFSQFGQILDILVS. . . . . . . . RS
Template Known Secondary structure  STTS

S
S

TTS
.......TTTS
BS

B

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S
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   4.....10.........20.... .....30.........40...... ..
 
   199200.........210.........220.........230......
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Query Sequence  GGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  LKMRGQ. . . . . . . . . AFVIFKEVSSATNALRSMQGFPF
Template Known Secondary structure  TTTSS
.........BSSTTTT
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   4950.... .....60.........70.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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