Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence92.19%DateTue Jul 30 13:01:13 BST 2013
Rank175Aligned Residues63
% Identity22%Templatec4f26A_
PDB info PDB header:translationChain: A: PDB Molecule:polyadenylate-binding protein 1; PDBTitle: crystal structure of the second rrm domain of human pabpc1 a ph 9.0
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.........180.........190.........200......
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Query Sequence  IYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGLN
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Template Sequence  IFIKNLDKSI. . . . . . . . . . . DNKALYDTFSAFGNILSCKVV. CDENGSK. . . . . . . . . .
Template Known Secondary structure  S

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   101........110 .........120.........130. .......
 
   207..210.........220.........230......
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Query Sequence  FGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . GYGFVHFETQEAAERAIEKMNGMLL
Template Known Secondary structure  .....SSTT
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   139140.........150.........160...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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