Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence92.88%DateTue Jul 30 13:01:13 BST 2013
Rank159Aligned Residues91
% Identity24%Templatec3q2tC_
PDB info PDB header:rna binding protein/rnaChain: C: PDB Molecule:cleavage and polyadenylation specificity factor subunit 6; PDBTitle: crystal structure of cfim68 rrm/cfim25/rna complex
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  ALYIGNLTWWT. . . . . . . . . . . TDEDLTEAVHSLGVNDILEIKFFENRANG. . . . . . . . .
Template Known Secondary structure  S

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GGGT






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   82.......90.. .......100.........110.........120.
 
   206...210.........220.........230.........240.........250.........260.....
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Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFDTTKHFSEGAI
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Template Sequence  . . . QSKGFALVGVGSEASSKKLMDLLPKRELHGQ. . . . . . . . . NPVVTPVNKQFLSQFEM
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SSSSSTTS
BTTB.........



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   122.......130.........140.........150.. .......160.........
 
   266..
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Query Sequence  QRR
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Template Sequence  QSR
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   170..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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