Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence79.48%DateTue Jul 30 13:01:13 BST 2013
Rank222Aligned Residues70
% Identity20%Templatec2db1A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein f homolog
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.........150.........160.........170.........180.. .......190......
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Query Sequence  HDKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKI. . . KNVDIPMLDPYREV
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Template Sequence  EGGEGYVVKLRGLPWS. . . . . . . . . . . CSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQS
Template Known Secondary structure 
B



S

TT...........

TTTS
BTTGGGG
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   6...10.........20. ........30.........40.........50....
 
   197..200.........210.........220.........230......
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Query Sequence  MTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . . . . . GEAFVELESEDDVKLALK. KDRESM
Template Known Secondary structure  ...............BSSGG.GTT
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   55....60.........70.. ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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