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Job Description | A2A3V1 | Confidence | 95.45% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 55 | Aligned Residues | 69 |
% Identity | 16% | Template | c2rneA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:tia1 protein; |
PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1
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Resolution | UNK |
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143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | P | D | S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G | S | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | H | F | H | V | F | V | G | D | L | S | P | E | I | . |
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T | T | E | D | I | K | A | A | F | A | P | F | G | R | I | S | D | A | R | V | V | K | D | M | A | T | G | K | S | K | . |
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Template Known Secondary structure |   |
S | S |  |  |  |  |  |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
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. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
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203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | L | N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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G | Y | G | F | V | S | F | F | N | K | W | D | A | E | N | A | I | Q | Q | M | G | G | Q | W | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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