Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.68%DateTue Jul 30 13:01:13 BST 2013
Rank35Aligned Residues79
% Identity16%Templatec2e5iA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  LLSIQNPL. . . . . . . . YP. . . ITVDVLYTVCNPVGKVQRIVIF. . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

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   219220...... .. .230.........240.........250
 
   206...210.........220.........230.........240.........250.........260.
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Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFDTTKHFS
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Template Sequence  . KRNGIQ. AMVEFESVLCAQKAKAALNGADIYAGC. . . . . . . CTLKIEYARPTRLN
Template Known Secondary structure  .SSS.SSTT


BTTB.......S

S
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   251..... ...260.........270.........280... ......290.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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