Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence94.44%DateTue Jul 30 13:01:13 BST 2013
Rank112Aligned Residues87
% Identity22%Templated1oiaa_
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.... .....150.........160.........170.........180.........190........
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Query Sequence  HDKGP. DSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMT
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Template Sequence  PETRPNHTIYINNLNEKIKKD. . . . . . . ELKKSLYAIFSQFGQILDILVS. . . . . . . R. .
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SS

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   4.....10.........20.... .....30.........40...... .
 
   199200.........210.........220.........230.........240.........250........
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Query Sequence  GGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFDTTK
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Template Sequence  . . . . . . . . SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK. . . . . . . . . PMRIQYAKTD
Template Known Secondary structure  ........SGGGTT
SSTT
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   48.50.........60.........70.........80 .........90
 
   259
Predicted Secondary structure 
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Query Sequence  H
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Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   91
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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