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Job Description | A2A3V1 | Confidence | 95.68% | Date | Tue Jul 30 13:01:13 BST 2013 |
Rank | 35 | Aligned Residues | 79 |
% Identity | 16% | Template | c2e5iA_ |
PDB info |
PDB header:gene regulation | Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; |
PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like
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Resolution | UNK |
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146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | I | Y | F | E | G | L | P | C | K | W | F | A | P | K | G | S | S | G | E | K | P | C | E | E | I | L | R | V | V | F | E | S | F | G | K | I | K | N | V | D | I | P | M | L | D | P | Y | R | E | V | M | T | G | G | S | F | G | G | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | S | I | Q | N | P | L | . |
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I | T | V | D | V | L | Y | T | V | C | N | P | V | G | K | V | Q | R | I | V | I | F | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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219 | 220 | . | . | . | . | . | . | |
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206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | F | G | L | Q | T | F | E | A | F | I | Q | Y | Q | E | S | T | D | F | I | K | A | M | E | S | L | R | G | M | K | L | M | L | K | G | D | D | G | K | A | L | A | C | N | I | K | V | M | F | D | T | T | K | H | F | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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K | R | N | G | I | Q | . |
A | M | V | E | F | E | S | V | L | C | A | Q | K | A | K | A | A | L | N | G | A | D | I | Y | A | G | C | . |
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C | T | L | K | I | E | Y | A | R | P | T | R | L | N |
Template Known Secondary structure |   |
. |  | S | S | S |  |  | . |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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251 | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
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. | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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