Emaill.a.kelley@imperial.ac.uk
DescriptionA2A3V1
DateTue Jul 30 13:01:13 BST 2013
Unique Job IDbbb18aa4657c79ba

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3s01A_



97.3 14 PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l;
PDBTitle: crystal structure of a heterogeneous nuclear ribonucleoprotein l2 (hnrpl) from mus musculus at 2.15 a resolution
2c2i38A_



97.0 27 PDB header:rna binding protein/chimera
Chain: A: PDB Molecule:fusion protein consists of immunoglobin g-
PDBTitle: solution structure of the rrm of srp20
3c3s8sA_



96.7 17 PDB header:transcription
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd1a;
PDBTitle: crystal structure of the rrm domain of human setd1a
4d2cpxa1



96.5 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
5d2bz2a1



96.5 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
6c2dgpA_



96.4 24 PDB header:rna binding protein
Chain: A: PDB Molecule:bruno-like 4, rna binding protein;
PDBTitle: solution structure of the n-terminal rna binding domain in2 bruno-like 4 rna-binding protein
7d2cpia1



96.4 23 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
8d1wf1a_



96.4 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
9d1whxa_



96.3 30 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
10d1fj7a_



96.3 18 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
11c2kn4A_



96.3 26 PDB header:rna binding protein
Chain: A: PDB Molecule:immunoglobulin g-binding protein g, splicing factor;
PDBTitle: the structure of the rrm domain of sc35
12d1wexa_



96.3 18 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
13d1n54b_



96.2 21 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
14c3r27A_



96.2 19 PDB header:protein binding
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l;
PDBTitle: crystal structure of the first rrm domain of heterogeneous nuclear2 ribonucleoprotein l (hnrnp l)
15d2cq1a1



96.1 17 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
16c3sdeB_



96.1 29 PDB header:rna binding protein
Chain: B: PDB Molecule:non-pou domain-containing octamer-binding protein;
PDBTitle: crystal structure of a paraspeckle-protein heterodimer, pspc1/nono
17c3egnA_



96.1 26 PDB header:splicing
Chain: A: PDB Molecule:rna-binding protein 40;
PDBTitle: c-terminal rna recognition motif of the u11/u12 65k protein
18c2krbA_



96.1 27 PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 3
PDBTitle: solution structure of eif3b-rrm bound to eif3j peptide
19c2fy1A_



96.1 23 PDB header:structural protein/rna
Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family
PDBTitle: a dual mode of rna recognition by the rbmy protein
20d2b0ga1



96.0 28 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
21d1fnxh1



not modelled 96.0 24 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
22c2cpiA_



not modelled 96.0 25 PDB header:gene regulation
Chain: A: PDB Molecule:ccr4-not transcription complex subunit 4;
PDBTitle: solution structure of the rna recognition motif of cnot4
23c2jrsA_



not modelled 96.0 26 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 39;
PDBTitle: solution nmr structure of caper rrm2 domain. northeast2 structural genomics target hr4730a
24c2dnzA_



not modelled 96.0 29 PDB header:rna binding protein
Chain: A: PDB Molecule:probable rna-binding protein 23;
PDBTitle: solution structure of the second rna binding domain of rna2 binding motif protein 23
25d1fnxh2



not modelled 95.9 20 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
26d1x4fa1



not modelled 95.9 25 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
27d1x4ga1



not modelled 95.9 16 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
28c2jx2A_



not modelled 95.8 24 PDB header:transcription
Chain: A: PDB Molecule:negative elongation factor e;
PDBTitle: solution conformation of rna-bound nelf-e rrm
29c2divA_



not modelled 95.8 16 PDB header:rna binding protein
Chain: A: PDB Molecule:trna selenocysteine associated protein;
PDBTitle: solution structure of the rrm domain of trna selenocysteine2 associated protein
30c2do0A_



not modelled 95.8 16 PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m;
PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m
31d2f9da1



not modelled 95.7 27 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
32c2la6A_



not modelled 95.7 15 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein fus;
PDBTitle: solution nmr structure of rrm domain of rna-binding protein fus from2 homo sapiens, northeast structural genomics consortium target hr6430a
33c3pgwS_



not modelled 95.7 20 PDB header:splicing/dna/rna
Chain: S: PDB Molecule:u1-70k;
PDBTitle: crystal structure of human u1 snrnp
34d1x5ua1



not modelled 95.7 24 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
35c2e5iA_



not modelled 95.7 16 PDB header:gene regulation
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like;
PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like
36d2cq3a1



not modelled 95.7 24 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
37c3md1B_



not modelled 95.7 20 PDB header:rna binding protein
Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein
PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1)
38d1x4aa1



not modelled 95.7 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
39c3ns5B_



not modelled 95.7 25 PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161
40d1fjeb1



not modelled 95.7 18 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
41c2f3jA_



not modelled 95.6 24 PDB header:transport protein
Chain: A: PDB Molecule:rna and export factor binding protein 2;
PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155).
42c3pgwP_



not modelled 95.6 25 PDB header:splicing/dna/rna
Chain: P: PDB Molecule:u1-a;
PDBTitle: crystal structure of human u1 snrnp
43d1wi8a_



not modelled 95.6 21 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
44d1hl6a_



not modelled 95.6 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
45c2dnoA_



not modelled 95.6 20 PDB header:rna binding protein
Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant;
PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant
46d1sjqa_



not modelled 95.6 20 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
47d2cpza1



not modelled 95.6 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
48d2ghpa1



not modelled 95.5 20 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
49c3ns6B_



not modelled 95.5 24 PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: crystal structure of hte rna recognition motif of yeast eif3b residues2 76-170
50c2adcA_



95.5 19 PDB header:rna binding protein/rna
Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1;
PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd34 complexed with cucucu rna
51d2cpea1



not modelled 95.5 18 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
52c2lcwA_



not modelled 95.5 17 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein fus;
PDBTitle: solution structure of fus/tls rrm domain
53d2ghpa3



not modelled 95.5 27 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
54d1b7fa1



not modelled 95.5 20 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
55c2rneA_



not modelled 95.4 16 PDB header:rna binding protein
Chain: A: PDB Molecule:tia1 protein;
PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1
56d2cq2a1



not modelled 95.4 24 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
57d2adca1



not modelled 95.4 24 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
58c3u1lA_



not modelled 95.4 19 PDB header:splicing
Chain: A: PDB Molecule:pre-mrna-splicing factor cwc2;
PDBTitle: structure of the mrna splicing complex component cwc2
59c2lkzA_



not modelled 95.4 17 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 5;
PDBTitle: solution structure of the second rrm domain of rbm5
60c2ku7A_



not modelled 95.4 21 PDB header:transcription
Chain: A: PDB Molecule:mll1 phd3-cyp33 rrm chimeric protein;
PDBTitle: solution structure of mll1 phd3-cyp33 rrm chimeric protein
61c2nlwA_



not modelled 95.3 25 PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 3
PDBTitle: solution structure of the rrm domain of human eukaryotic2 initiation factor 3b
62c2kviA_



not modelled 95.3 28 PDB header:rna binding protein
Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3;
PDBTitle: structure of nab3 rrm
63c2dnqA_



not modelled 95.3 27 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 4b;
PDBTitle: solution structure of rna binding domain 1 in rna-binding2 protein 30
64d2cqca1



not modelled 95.3 27 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
65d1whwa_



not modelled 95.3 21 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
66d1whya_



not modelled 95.2 37 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
67c2dh9A_



not modelled 95.2 23 PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m;
PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m
68d1h6kx_



not modelled 95.2 31 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
69c2e44A_



not modelled 95.2 15 PDB header:rna binding protein
Chain: A: PDB Molecule:insulin-like growth factor 2 mrna binding
PDBTitle: solution structure of rna binding domain in insulin-like2 growth factor 2 mrna binding protein 3
70d1h2tz_



not modelled 95.2 23 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
71c2do4A_



not modelled 95.2 17 PDB header:immune system
Chain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t-
PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3
72c2e5jA_



not modelled 95.2 22 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:methenyltetrahydrofolate synthetase domain
PDBTitle: solution structure of rna binding domain in2 methenyltetrahydrofolate synthetase domain containing
73d2cpha1



not modelled 95.1 28 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
74d1x5oa1



not modelled 95.1 15 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
75c4a8xA_



not modelled 95.1 20 PDB header:transcription
Chain: A: PDB Molecule:rna-binding protein with serine-rich domain 1;
PDBTitle: structure of the core asap complex
76d2ad9a1



not modelled 95.1 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
77d2cqba1



not modelled 95.1 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
78c3cw18_



not modelled 95.0 22 PDB header:splicing
Chain: 8: PDB Molecule:u1 small nuclear ribonucleoprotein 70 kda;
PDB Fragment:nucleotides 57-82 absent, replaced with kissing loop; PDBTitle: crystal structure of human spliceosomal u1 snrnp
79d1b7fa2



not modelled 95.0 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
80c2kxnB_



not modelled 95.0 25 PDB header:rna binding protein/rna
Chain: B: PDB Molecule:transformer-2 protein homolog beta;
PDBTitle: nmr structure of human tra2beta1 rrm in complex with aagaac rna
81d2j0sd1



not modelled 95.0 25 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
82d1fxla1



not modelled 95.0 26 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
83d1x5sa1



not modelled 94.9 21 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
84d2erra1



not modelled 94.9 25 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
85c2d9oA_



not modelled 94.9 22 PDB header:rna binding protein
Chain: A: PDB Molecule:dnaj (hsp40) homolog, subfamily c, member 17;
PDBTitle: solution structure of rna binding domain in hypothetical2 protein flj10634
86c2lxiA_



not modelled 94.9 20 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 10;
PDBTitle: nmr structure of the n-terminal rna binding domain 1 (rrm1) of the2 protein rbm10 from homo sapiens
87d1h2vz_



not modelled 94.8 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
88d2u1aa_



not modelled 94.8 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
89c2ywkA_



not modelled 94.8 20 PDB header:rna binding protein
Chain: A: PDB Molecule:putative rna-binding protein 11;
PDBTitle: crystal structure of rrm-domain derived from human putative2 rna-binding protein 11
90d1u6fa1



not modelled 94.8 24 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
91d2adba1



not modelled 94.8 26 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
92c2fhoB_



not modelled 94.7 25 PDB header:rna binding protein
Chain: B: PDB Molecule:spliceosomal protein p14;
PDBTitle: nmr solution structure of the human spliceosomal protein2 complex p14-sf3b155
93c2jvoA_



not modelled 94.7 30 PDB header:rna binding protein
Chain: A: PDB Molecule:nucleolar protein 3;
PDBTitle: segmental isotope labeling of npl3
94d2ghpa2



not modelled 94.7 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
95c3nnhA_



not modelled 94.7 19 PDB header:rna binding protein/rna
Chain: A: PDB Molecule:cugbp elav-like family member 1;
PDBTitle: crystal structure of the cugbp1 rrm1 with guuguuuuguuu rna
96c2dnlA_



not modelled 94.7 21 PDB header:translation
Chain: A: PDB Molecule:cytoplasmic polyadenylation element binding
PDBTitle: solution structure of rna binding domain in cytoplasmic2 polyadenylation element binding protein 3
97d1no8a_



not modelled 94.7 27 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
98c1no8A_



not modelled 94.7 27 PDB header:rna binding protein
Chain: A: PDB Molecule:aly;
PDBTitle: solution structure of the nuclear factor aly rbd domain
99c3ex7B_



not modelled 94.7 22 PDB header:hydrolase/rna binding protein/rna
Chain: B: PDB Molecule:rna-binding protein 8a;
PDBTitle: the crystal structure of ejc in its transition state
100d1fxla2



not modelled 94.6 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
101c2x1aA_



not modelled 94.6 18 PDB header:transcription/rna
Chain: A: PDB Molecule:mrna 3'-end-processing protein rna15;
PDBTitle: structure of rna15 rrm with rna bound (g)
102c2e5hA_



not modelled 94.6 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:zinc finger cchc-type and rna-binding motif-
PDBTitle: solution structure of rna binding domain in zinc finger2 cchc-type and rna binding motif 1
103c2xnqA_



not modelled 94.6 27 PDB header:rna binding protein
Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3;
PDBTitle: structural insights into cis element recognition of non-2 polyadenylated rnas by the nab3-rrm
104c2a3jA_



not modelled 94.6 15 PDB header:rna binding protein
Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a;
PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein
105c2pehA_



not modelled 94.6 17 PDB header:protein binding
Chain: A: PDB Molecule:splicing factor 45;
PDBTitle: crystal structure of the uhm domain of human spf45 in complex with2 sf3b155-ulm5
106c2la4A_



not modelled 94.5 19 PDB header:rna binding protein
Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein
PDBTitle: nmr structure of the c-terminal rrm domain of poly(u) binding 1
107d2cqia1



not modelled 94.5 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
108c2ghpC_



not modelled 94.5 19 PDB header:rna binding protein
Chain: C: PDB Molecule:u4/u6 snrna-associated splicing factor prp24;
PDBTitle: crystal structure of the n-terminal 3 rna binding domains of the yeast2 splicing factor prp24
109c2dhgA_



not modelled 94.5 10 PDB header:rna binding protein
Chain: A: PDB Molecule:trna selenocysteine associated protein (secp43);
PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein
110c2d9pA_



not modelled 94.5 20 PDB header:rna binding protein
Chain: A: PDB Molecule:polyadenylate-binding protein 3;
PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3
111d1cvja1



not modelled 94.5 20 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
112d1oiaa_



not modelled 94.4 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
113c2dngA_



not modelled 94.4 14 PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 4h;
PDBTitle: solution structure of rna binding domain in eukaryotic2 translation initiation factor 4h
114c2dnpA_



not modelled 94.4 21 PDB header:transcription
Chain: A: PDB Molecule:rna-binding protein 14;
PDBTitle: solution structure of rna binding domain 2 in rna-binding2 protein 14
115d2adca2



not modelled 94.3 25 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
116c2dguA_



not modelled 94.3 37 PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein q;
PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein q
117c1cvjF_



not modelled 94.3 23 PDB header:gene regulation/rna
Chain: F: PDB Molecule:polyadenylate binding protein 1;
PDBTitle: x-ray crystal structure of the poly(a)-binding protein in2 complex with polyadenylate rna
118d1weya_



not modelled 94.2 16 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
119d1s79a_



not modelled 94.1 19 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
120d1p1ta_



not modelled 94.1 22 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD