Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence92.50%DateTue Jul 30 13:01:13 BST 2013
Rank165Aligned Residues72
% Identity19%Templated2cq0a1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190 .......
Predicted Secondary structure 





























.


Query SS confidence 



















































.






Query Sequence  DHDKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPML. DPYREVM
Query Conservation                                                      .       
Alig confidence 














........

...























.





.
Template Conservation          
 
 


........  ... 
   
   
   
 
               .
Template Sequence  RRADDNATIRVTNLS. . . . . . . . ED. . . TRETDLQELFRPFGSISRIYLAKDKTTGQSK.
Template Known Secondary structure 


SSSS

........TT...

TTSTTT


SSS
S.
Template Predicted Secondary structure 










........

...



















.
Template SS confidence 



























































   233......240....... .. 250.........260.........270.........280
 
   198.200.........210.........220.........230......
Predicted Secondary structure 















Query SS confidence 






































Query Sequence  TGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
Query Conservation                                         
Alig confidence  ..............
























Template Conservation  ..............  
 
 
     
  

  


   
Template Sequence  . . . . . . . . . . . . . . GFAFISFHRREDAARAIAGVSGFGY
Template Known Secondary structure  ..............SSTTT
Template Predicted Secondary structure  ..............








Template SS confidence 






































   281........290.........300.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D