Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.56%DateTue Jul 30 13:01:13 BST 2013
Rank45Aligned Residues66
% Identity20%Templatec2dnoA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:trinucleotide repeat containing 4 variant; PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  KLFVGMLGKQQT. . . . . . . . . . . DEDVRKMFEPFGTIDECTVLRGPDGTSK. . . . . . . . .
Template Known Secondary structure 
S

SS

...........GGGS

TT

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   72.......80... ......90.........100.........110.
 
   206...210.........220.........230.......
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Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRGMKLM
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Template Sequence  . . . . . . GCAFVKFQTHAEAQAAINTLHSSRTL
Template Known Secondary structure  ......SSTT



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   112.......120.........130.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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