Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence95.55%DateTue Jul 30 13:01:13 BST 2013
Rank46Aligned Residues83
% Identity20%Templated1sjqa_
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180.........190.........200
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Query Sequence  DKGPDSIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGG
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Template Sequence  GVPSRVIHIRKLPIDV. . . . . . . . . . . TEGEVISLGLPFGKVTNLLMLKGKNQ. . . . . . .
Template Known Secondary structure 





S

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   13......20........ .30.........40.........50....
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  SFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKLMLKGDDGKALACNIKVMFDTTKHF
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Template Sequence  . . . . . . . . . . . . . AFIEMNTEEAANTMVNYYTSVTPVLRGQP. . . . . . . IYIQFSNHKEL
Template Known Secondary structure  .............SSTTS

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B


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   55....60.........70.........80... ......90....
 
   261
Predicted Secondary structure 
Query SS confidence 
Query Sequence  S
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   95
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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