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Job DescriptionA2A3V1
Confidence87.33%DateTue Jul 30 13:01:13 BST 2013
Rank204Aligned Residues58
% Identity21%Templatec1wwhB_
PDB info PDB header:protein transportChain: B: PDB Molecule:nucleoporin 35; PDBTitle: crystal structure of the mppn domain of mouse nup35
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  WVTVFGFPQASASY. . . . . . . . . . . . ILLQFAQYGNILKHVMSNTGNW. . . . . . . . . . . .
Template Known Secondary structure 


GGG............TTS

S
SS
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   174.....180....... ..190.........200.........
 
   206...210.........220.........230......
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Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . MHIRYQSKLQARKAL. SKDGRIF
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SS.TTTT
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   210.........220.... .....230.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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