Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence90.98%DateTue Jul 30 13:01:13 BST 2013
Rank190Aligned Residues66
% Identity14%Templatec2cjkA_
PDB info PDB header:rna-binding proteinChain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 4; PDBTitle: structure of the rna binding domain of hrp1 in complex with2 rna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.....
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Query Sequence  SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREVMTGGSFGGL
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Template Sequence  KMFIGGLNWD. . . . . . . . . . . TTEDNLREYFGKYGTVTDLKIMKDPATGRSR. . . . . . . .
Template Known Secondary structure 
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   160......... 170.........180.........190.........200
 
   206...210.........220.........230......
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Query Sequence  NFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . GFGFLSFEKPSSVDEVVKTQHILDG
Template Known Secondary structure  ......S
SSTS

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   201........210.........220.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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