Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V1
Confidence94.46%DateTue Jul 30 13:01:13 BST 2013
Rank110Aligned Residues69
% Identity20%Templatec2d9pA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:polyadenylate-binding protein 3; PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141.... ....150.........160.........170.........180.........190.....
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Query Sequence  DKGPD. . . . . SIYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYRE
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Template Sequence  GDRITRYQVVNLYVKNLD. . . . . . . . . . . DGIDDERLRKAFSPFGTITSAKVMMEGGRSK
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   285....290.........300.. .......310.........320.........330...
 
   196...200.........210.........220.........230......
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Query Sequence  VMTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . . . . . . GFGFVCFSSPEEATKAVTEMNGRIV
Template Known Secondary structure  ................SSTT
BS
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   334.....340.........350........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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