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Job DescriptionA2A3V1
Confidence96.11%DateTue Jul 30 13:01:13 BST 2013
Rank16Aligned Residues65
% Identity29%Templatec3sdeB_
PDB info PDB header:rna binding proteinChain: B: PDB Molecule:non-pou domain-containing octamer-binding protein; PDBTitle: crystal structure of a paraspeckle-protein heterodimer, pspc1/nono
Resolution1.90 Å
Model Dimensions (Å)X:37.506 Y:36.824 Z:33.611

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141..... ...150.........160.........170.........180.........190......
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Query Sequence  DKGPDS. . . . IYFEGLPCKWFAPKGSSGEKPCEEILRVVFESFGKIKNVDIPMLDPYREV
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Template Sequence  GEKTFTQRSRLFVGNLPPDI. . . . . . . . . . . TEEEMRKLFEKYGKAGEVFI. . . . . . . . .
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   66...70.........80..... ....90.........100.....
 
   197..200.........210.........220.........230......
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Query Sequence  MTGGSFGGLNFGLQTFEAFIQYQESTDFIKAMESLRGMKL
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Template Sequence  . . . . . . . . . . . HKDKGFGFIRLETRTLAEIAKVELDNMPL
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   106...110.........120.........130....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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