Return to main results Retrieve Phyre Job Id

Job DescriptionP02340
Confidence100.00%DateTue Jul 30 12:57:01 BST 2013
Rank5Aligned Residues199
% Identity57%Templatec2xipA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:tumour protein p73; PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution
Resolution1.82 Å
Model Dimensions (Å)X:47.693 Y:45.091 Z:47.305

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.......
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  SSFVPSQKTYQGNYGFHLGFLQSGTAKSVMCTYSPPLNKLFCQLAKTCPVQLWVSATPPA
Query Conservation 

 

    


 
 
 
 
      

  



  





 
   


 
     

 
Alig confidence 



























































Template Conservation   
  

   


 
 
 
        

   


  
 



 
   


 
     

 
Template Sequence  APVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPP
Template Known Secondary structure 








B
TTTT






STT
STTTT
TTS
SS


T
Template Predicted Secondary structure 



































Template SS confidence 



























































   112.......120.........130.........140.........150.........160.........170.
 
   148.150.........160.........170.........180 .........190.........200.....
Predicted Secondary structure 




















..













Query SS confidence 
































. .
























Query Sequence  GSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGD. . GLAPPQHLIRVEGNLYPEYLEDRQT
Query Conservation 
  



 

   
   
 
 

  
    
  ..      



 


  
 
  
  
Alig confidence 
































..
























Template Conservation 
  

   

   
     
 

  
    
          
 

      
 
     
Template Sequence  GTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVT
Template Known Secondary structure  T

STTTTTSB



SSTTTTT

S
TT
SS
TT

TTT
Template Predicted Secondary structure 



































Template SS confidence 



























































   172.......180.........190.........200.........210.........220.........230.
 
   206...210.........220.........230.........240.........250.........260.....
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  FRHSVVVPYEPPEAGSEYTTIHYKYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRDSFE
Query Conservation   
 

 

 
 
  
    

   


 


 







 





   
 



  
 
Alig confidence 






























...

























Template Conservation   
 

 

   

 
    
    


 


...  



 





   
 



  
 
Template Sequence  GRQSVVVPYEPPQVGTEFTTILYNFMCNSSC. . . VGRRPILIIITLEMRDGQVLGRRSFE
Template Known Secondary structure 





STT



S
GGG...





TTS
Template Predicted Secondary structure 












...








Template SS confidence 



























































   232.......240.........250.........260.. .......270.........280........
 
   266...270.........280.........
Predicted Secondary structure 








Query SS confidence 























Query Sequence  VRVCACPGRDRRTEEENFRKKEVL
Query Conservation 










  

    

   
Alig confidence 























Template Conservation 






 


  

         
Template Sequence  GRICACPGRDRKADEDHYREAENL
Template Known Secondary structure 
S
T
Template Predicted Secondary structure 





Template SS confidence 























   292.......300.........310.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D