Return to main results Retrieve Phyre Job Id

Job DescriptionP02340
Confidence4.35%DateTue Jul 30 12:57:01 BST 2013
Rank97Aligned Residues37
% Identity8%Templatec2xetB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: conserved hydrophobic clusters on the surface of the caf1a usher2 c-terminal domain are important for f1 antigen assembly
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130. ........140.........150.........160.
Predicted Secondary structure 


....












Query SS confidence 






. . . .





























Query Sequence  NKLFCQL. . . . AKTCPVQLWVSATPPAGSRVRAMAIYKKSQ
Query Conservation 




 
....   


 
     

 
  



 

   
Alig confidence 






....





























Template Conservation 
 
 
 

      
   
 
        
      
   
Template Sequence  SKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCILNN
Template Known Secondary structure  S
SSTTS

S

S

S


Template Predicted Secondary structure 

















Template SS confidence 








































   771........780.........790.........800.........810.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D