Return to main results Retrieve Phyre Job Id

Job DescriptionP02340
Confidence100.00%DateTue Jul 30 12:57:01 BST 2013
Rank2Aligned Residues223
% Identity51%Templatec2rmnA_
PDB info PDB header:cell cycle, antitumor proteinChain: A: PDB Molecule:tumor protein 63; PDBTitle: the solution structure of the p63 dna-binding domain
ResolutionUNK
Model Dimensions (Å)X:50.502 Y:69.463 Z:70.895

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.......
Predicted Secondary structure 







































Query SS confidence 



























































Query Sequence  APAPATPWPLSSFVPSQKTYQGNYGFHLGFLQSGTAKSVMCTYSPPLNKLFCQLAKTCPV
Query Conservation         

 

 

    


 
 
 
 
      

  



  





 
   


Alig confidence 



























































Template Conservation     
      
   

   


 
 
 
        

  



  
 



 
   


Template Sequence  GSSTFDALSPSPAIPSNTDYPGPHSFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPI
Template Known Secondary structure 

S
SSSSSS








B
TTTT







TT
STTTT
TT

Template Predicted Secondary structure 








































Template SS confidence 



























































   113......120.........130.........140.........150.........160.........170..
 
   138.140.........150.........160.........170........ .180.........190.....
Predicted Secondary structure 























..









Query SS confidence 








































. .
















Query Sequence  QLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSD. . GDGLAPPQHLIRVEGNL
Query Conservation   
     

 
  



 

   
   
 
 

  
    
..        



 


 
Alig confidence 








































..
















Template Conservation   
     

 
  



 

   
     
 

  
               
 

     
Template Sequence  QIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNS
Template Known Secondary structure 
SS


TT
SSTS




S



TT
SS
TTSSS
T
Template Predicted Secondary structure 


































Template SS confidence 



























































   173......180.........190.........200.........210.........220.........230..
 
   196...200.........210.........220.........230.........240.........250.....
Predicted Secondary structure 






























Query SS confidence 



























































Query Sequence  YPEYLEDRQTFRHSVVVPYEPPEAGSEYTTIHYKYMCNSSCMGGMNRRPILTIITLEDSS
Query Conservation   
 
  
  
 
 

 

 
 
  
    

   


 


 







 





   
Alig confidence 



























































Template Conservation   
 
  
  
 
 

 

 
 

 
    
    


 


 

 




 





   
Template Sequence  HAQYVEDPITGRQSVLVPYEPPQVGTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRD
Template Known Secondary structure  T

TTT






TTSSSS
TTSTTTTTT


TT
Template Predicted Secondary structure 


























Template SS confidence 



























































   233......240.........250.........260.........270.........280.........290..
 
   256...260.........270.........280.........290.........300
Predicted Secondary structure 





















Query SS confidence 












































Query Sequence  GNLLGRDSFEVRVCACPGRDRRTEEENFRKKEVLCPELPPGSAKR
Query Conservation 
 



  
 










  

    

           
  
Alig confidence 












































Template Conservation 
 



  
 






 


  

    
               
Template Sequence  GQVLGRRCFEARICACPGRDRKADEDSIRKQQVSDSTKNGDAFRQ
Template Known Secondary structure  S

S






SSSS
SS
Template Predicted Secondary structure 






















Template SS confidence 












































   293......300.........310.........320.........330.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D