Email l.a.kelley@imperial.ac.uk Description Q9DB75 Date Tue Jul 30 13:11:58 BST 2013 Unique Job ID b5a3457121c54f90

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2joxA_ 72.5 22 PDB header:transcription Chain: A: PDB Molecule:churchill protein; PDBTitle: embryonic neural inducing factor churchill is not a dna-2 binding zinc finger protein: solution structure reveals a3 solvent-exposed beta-sheet and zinc binuclear cluster 2 c1hk8A_ 59.7 32 PDB header:oxidoreductase Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase; PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp 3 d1hk8a_ 59.7 32 Fold:PFL-like glycyl radical enzymes Superfamily:PFL-like glycyl radical enzymes Family:Class III anaerobic ribonucleotide reductase NRDD subunit 4 d2ct1a1 57.4 28 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 5 c2opfA_ 54.4 23 PDB header:hydrolase/dna Chain: A: PDB Molecule:endonuclease viii; PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate 6 c3eb6A_ 53.6 23 PDB header:apoptosis, ligase Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 3; PDBTitle: structure of the ciap2 ring domain bound to ubch5b 7 c1k82D_ 46.7 23 PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna 8 c4a17Y_ 46.5 20 PDB header:ribosome Chain: Y: PDB Molecule:rpl37a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2. 9 c3fl2A_ 45.3 20 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1 10 c3zf7o_ 44.4 17 PDB header:ribosome Chain: O: PDB Molecule:60s ribosomal protein l13a, putative; PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome 11 c2yhoE_ 43.3 12 PDB header:ligase Chain: E: PDB Molecule:e3 ubiquitin-protein ligase mylip; PDBTitle: the idol-ube2d complex mediates sterol-dependent degradation of the2 ldl receptor 12 c3cc4Z_ 43.1 26 PDB header:ribosome Chain: Z: PDB Molecule:50s ribosomal protein l37ae; PDBTitle: co-crystal structure of anisomycin bound to the 50s ribosomal subunit 13 c2kdxA_ 42.8 27 PDB header:metal-binding protein Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein PDBTitle: solution structure of hypa protein 14 d2cona1 40.1 18 Fold:Rubredoxin-like Superfamily:NOB1 zinc finger-like Family:NOB1 zinc finger-like 15 c2f5qA_ 39.7 46 PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 16 c2ea5A_ 39.1 23 PDB header:cell cycle Chain: A: PDB Molecule:cell growth regulator with ring finger domain PDBTitle: solution structure of the ring domain of the human cell2 growth regulator with ring finger domain 1 protein 17 c2qa4Z_ 38.9 26 PDB header:ribosome Chain: Z: PDB Molecule:50s ribosomal protein l37ae; PDBTitle: a more complete structure of the the l7/l12 stalk of the2 haloarcula marismortui 50s large ribosomal subunit 18 c1z6uA_ 35.8 23 PDB header:ligase Chain: A: PDB Molecule:np95-like ring finger protein isoform b; PDBTitle: np95-like ring finger protein isoform b [homo sapiens] 19 d1ffkw_ 35.7 22 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein L37ae 20 c2djbA_ 35.1 19 PDB header:gene regulation Chain: A: PDB Molecule:polycomb group ring finger protein 6; PDBTitle: solution structure of the ring domain of the human polycomb2 group ring finger protein 6 21 d1v87a_ not modelled 34.9 36 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 22 d1x63a2 not modelled 34.3 50 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 23 d1fbva4 not modelled 34.2 20 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 24 c2lo2A_ not modelled 34.2 17 PDB header:transcription Chain: A: PDB Molecule:saga-associated factor 11; PDBTitle: solution structure of sgf11(63-99) zinc finger domain 25 c2eclA_ not modelled 34.1 17 PDB header:metal binding protein Chain: A: PDB Molecule:ring-box protein 2; PDBTitle: solution structure of the ring domain of the human ring-box2 protein 2 26 c2ecgA_ not modelled 33.6 15 PDB header:apoptosis Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 4; PDBTitle: solution structure of the ring domain of the baculoviral2 iap repeat-containing protein 4 from homo sapiens 27 c2bi6H_ not modelled 33.4 26 PDB header:cysteine protease inhibitor Chain: H: PDB Molecule:bromelain inhibitor vi; PDBTitle: nmr study of bromelain inhibitor vi from pineapple stem 28 c3twkB_ not modelled 33.1 10 PDB header:hydrolase Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1; PDBTitle: crystal structure of arabidopsis thaliana fpg 29 c2kluA_ not modelled 33.1 13 PDB header:immune system, membrane protein Chain: A: PDB Molecule:t-cell surface glycoprotein cd4; PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4 30 c1bi6H_ not modelled 32.2 26 PDB header:cysteine protease inhibitor Chain: H: PDB Molecule:bromelain inhibitor vi; PDBTitle: nmr structure of bromelain inhibitor vi from pineapple stem 31 d1iyma_ not modelled 32.1 21 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 32 d1lv3a_ not modelled 31.8 18 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Hypothetical zinc finger protein YacG 33 c2d8tA_ not modelled 31.6 16 PDB header:metal binding protein Chain: A: PDB Molecule:ring finger protein 146; PDBTitle: solution structure of the ring domain of the human ring2 finger protein 146 34 c2jvxA_ not modelled 31.3 27 PDB header:metal binding protein Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: solution structure of human nemo zinc finger 35 d1jj2y_ not modelled 30.1 26 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein L37ae 36 c1nnjA_ not modelled 29.9 46 PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna 37 c2jmdA_ not modelled 29.8 30 PDB header:ligase Chain: A: PDB Molecule:tnf receptor-associated factor 6; PDBTitle: solution structure of the ring domain of human traf6 38 d1vdda_ not modelled 29.1 29 Fold:Recombination protein RecR Superfamily:Recombination protein RecR Family:Recombination protein RecR 39 d1x6ma_ not modelled 28.5 27 Fold:Mss4-like Superfamily:Mss4-like Family:Glutathione-dependent formaldehyde-activating enzyme, Gfa 40 c2lcqA_ not modelled 28.4 25 PDB header:metal binding protein Chain: A: PDB Molecule:putative toxin vapc6; PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii 41 d1vqoz1 not modelled 28.2 27 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein L37ae 42 c1yshD_ not modelled 27.9 18 PDB header:structural protein/rna Chain: D: PDB Molecule:ribosomal protein l37a; PDBTitle: localization and dynamic behavior of ribosomal protein l30e 43 c1vddC_ not modelled 27.7 29 PDB header:recombination Chain: C: PDB Molecule:recombination protein recr; PDBTitle: crystal structure of recombinational repair protein recr 44 c4epoL_ not modelled 27.7 32 PDB header:protein binding/ligase Chain: L: PDB Molecule:e3 ubiquitin-protein ligase rnf8; PDBTitle: crystal structure of rnf8 bound to the ubc13/mms2 heterodimer 45 c3vk6A_ not modelled 27.2 23 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hakai; PDBTitle: crystal structure of a phosphotyrosine binding domain 46 c4b6ap_ not modelled 26.9 22 PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l17-a; PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1 47 c2h0dB_ not modelled 25.4 21 PDB header:metal binding protein/ligase Chain: B: PDB Molecule:ubiquitin ligase protein ring2; PDBTitle: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex 48 d1wiia_ not modelled 25.4 23 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Putative zinc binding domain 49 c2hdpB_ not modelled 24.9 19 PDB header:ligase Chain: B: PDB Molecule:ubiquitin-protein ligase e3 mdm2; PDBTitle: solution structure of hdm2 ring finger domain 50 c1ee8A_ not modelled 24.7 35 PDB header:dna binding protein Chain: A: PDB Molecule:mutm (fpg) protein; PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8 51 c3j39p_ not modelled 24.7 19 PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l17; PDBTitle: structure of the d. melanogaster 60s ribosomal proteins 52 c3na7A_ not modelled 24.5 31 PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 53 c2lo4A_ not modelled 24.4 36 PDB header:protein transport Chain: A: PDB Molecule:optineurin; PDBTitle: nmr solution structure of optineurin zinc-finger domain 54 c1s1i9_ not modelled 24.0 13 PDB header:ribosome Chain: 9: PDB Molecule:60s ribosomal protein l43; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 55 c2zkrz_ not modelled 23.8 25 PDB header:ribosomal protein/rna Chain: Z: PDB Molecule:e site t-rna; PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map 56 c2jvyA_ not modelled 23.7 27 PDB header:metal binding protein Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: solution structure of the eda-id-related c417f mutant of2 human nemo zinc finger 57 c2vjfB_ not modelled 23.5 24 PDB header:ligase Chain: B: PDB Molecule:mdm4 protein; PDBTitle: crystal structure of the mdm2-mdmx ring domain heterodimer 58 c3jyw9_ not modelled 23.2 13 PDB header:ribosome Chain: 9: PDB Molecule:60s ribosomal protein l43; PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution 59 c2l0bA_ not modelled 23.2 21 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1; PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b 60 c3j21i_ not modelled 23.1 31 PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l13p; PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins) 61 c3l11A_ not modelled 22.6 21 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168; PDBTitle: crystal structure of the ring domain of rnf168 62 c2ecyA_ not modelled 22.2 20 PDB header:apoptosis Chain: A: PDB Molecule:tnf receptor-associated factor 3; PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3 63 d1qf8a_ not modelled 21.5 35 Fold:Rubredoxin-like Superfamily:Casein kinase II beta subunit Family:Casein kinase II beta subunit 64 c2ecmA_ not modelled 21.5 16 PDB header:metal binding protein Chain: A: PDB Molecule:ring finger and chy zinc finger domain- PDBTitle: solution structure of the ring domain of the ring finger2 and chy zinc finger domain-containing protein 1 from mus3 musculus 65 c3izrm_ not modelled 21.3 13 PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l23 (l14p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 66 d1g25a_ not modelled 21.1 21 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 67 d1e4ua_ not modelled 21.1 25 Fold:RING/U-box Superfamily:RING/U-box Family:RING finger domain, C3HC4 68 d2fu5a1 not modelled 20.9 11 Fold:Mss4-like Superfamily:Mss4-like Family:RabGEF Mss4 69 c3facE_ not modelled 20.7 25 PDB header:unknown function Chain: E: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of rhodobacter sphaeroides protein2 rsp_2168. northeast structural genomics target rhr83. 70 c1x4jA_ not modelled 20.7 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ring finger protein 38; PDBTitle: solution structure of ring finger in ring finger protein 38 71 c2ep4A_ not modelled 20.4 20 PDB header:protein binding Chain: A: PDB Molecule:ring finger protein 24; PDBTitle: solution structure of ring finger from human ring finger2 protein 24 72 c2kn9A_ not modelled 20.3 24 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin; PDBTitle: solution structure of zinc-substituted rubredoxin b (rv3250c) from2 mycobacterium tuberculosis. seattle structural genomics center for3 infectious disease target mytud.01635.a 73 d1rb9a_ not modelled 20.3 38 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 74 d1zvfa1 not modelled 19.7 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:3-hydroxyanthranilic acid dioxygenase-like 75 c1zzaA_ not modelled 19.5 15 PDB header:membrane protein Chain: A: PDB Molecule:stannin; PDBTitle: solution nmr structure of the membrane protein stannin 76 d2dsxa1 not modelled 19.3 33 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 77 d1hxra_ not modelled 19.1 11 Fold:Mss4-like Superfamily:Mss4-like Family:RabGEF Mss4 78 d1s24a_ not modelled 19.1 33 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 79 c1s24A_ not modelled 19.1 33 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin 2; PDBTitle: rubredoxin domain ii from pseudomonas oleovorans 80 c2m4yA_ not modelled 19.0 25 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin; PDBTitle: rubredoxin type protein from mycobacterium ulcerans 81 d1qcva_ not modelled 18.8 29 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 82 d2rdva_ not modelled 18.6 43 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 83 d4rxna_ not modelled 18.2 38 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 84 c2kizA_ not modelled 18.1 21 PDB header:metal binding protein Chain: A: PDB Molecule:e3 ubiquitin-protein ligase arkadia; PDBTitle: solution structure of arkadia ring-h2 finger domain 85 d1dx8a_ not modelled 18.1 24 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 86 d1ee8a3 not modelled 17.8 50 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 87 c2cklB_ not modelled 17.7 20 PDB header:transcription Chain: B: PDB Molecule:ubiquitin ligase protein ring2; PDBTitle: ring1b-bmi1 e3 catalytic domain structure 88 c2m0eA_ not modelled 17.7 40 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17; PDBTitle: solution structure of miz-1 zinc finger 6 89 d1brfa_ not modelled 17.7 38 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 90 c3vhsB_ not modelled 17.6 55 PDB header:metal binding protein Chain: B: PDB Molecule:atpase wrnip1; PDBTitle: crystal structure of ubz of human wrnip1 91 c2xeuA_ not modelled 17.5 32 PDB header:transcription Chain: A: PDB Molecule:ring finger protein 4; PDBTitle: ring domain 92 c3vhsA_ not modelled 17.5 55 PDB header:metal binding protein Chain: A: PDB Molecule:atpase wrnip1; PDBTitle: crystal structure of ubz of human wrnip1 93 d1iroa_ not modelled 17.4 38 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 94 d1h7va_ not modelled 17.4 24 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 95 c2ysoA_ not modelled 17.3 24 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 95 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 656-2 688) of human zinc finger protein 95 homolog 96 c1z60A_ not modelled 17.2 38 PDB header:transcription Chain: A: PDB Molecule:tfiih basal transcription factor complex p44 PDBTitle: solution structure of the carboxy-terminal domain of human2 tfiih p44 subunit 97 d1z60a1 not modelled 17.2 38 Fold:Cysteine-rich domain Superfamily:Cysteine-rich domain Family:TFIIH p44 subunit cysteine-rich domain 98 d1iu5a_ not modelled 17.1 43 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 99 d1jwhc_ not modelled 17.0 35 Fold:Rubredoxin-like Superfamily:Casein kinase II beta subunit Family:Casein kinase II beta subunit