Phyre 2 alignment of Q9DB75 with c4a17Y

Job Description Q9DB75
Confidence 46.49% Date Tue Jul 30 13:11:58 BST 2013

Rank 8 Aligned Residues 25

% Identity 20% Template c4a17Y_

PDB info PDB header:ribosome Chain: Y: PDB Molecule:rpl37a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.

Resolution 3.52 Å

Model Dimensions (Å) X:25.684 Y:30.321 Z:22.666

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.		.	.	.
Predicted Secondary structure																		.	.	.	.	.	.						.
Query SS confidence																		.	.	.	.	.	.						.
Query Sequence	I	N	D	F	K	D	V	T	H	T	C	P	S	C	K	A	Y	.	.	.	.	.	.	I	C	T	Y	K	.	R	L	C
Query Conservation																		.	.	.	.	.	.						.
Alig confidence																		.	.	.	.	.	.						.
Template Conservation
Template Sequence	F	E	I	T	Q	H	A	K	Y	G	C	P	F	C	G	K	V	A	V	K	R	A	A	V	G	I	W	K	C	K	P	C
Template Known Secondary structure							S					T	T	T										T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
	29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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