Job Description P32020 Confidence 99.77% Date Tue Jul 30 13:21:56 BST 2013 Rank 90 Aligned Residues 262 % Identity 19% Template c4jatB_ PDB info PDB header:transferase Chain: B: PDB Molecule:alpha-pyrone synthesis polyketide synthase-like pks11; PDBTitle: crystal structure of mycobacterium tuberculosis pks11 reveals2 intermediates in the synthesis of methyl-branched alkylpyrones Resolution 2.42 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.
Predicted Secondary structure																																				.																		.
Query SS confidence																																				.																		.
Query Sequence		D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	.	D	S	T	S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	.	I	P	I	I	N	V	N
Query Conservation																																				.																		.
Alig confidence																																				.																		.
Template Conservation
Template Sequence		K	A	V	D	L	G	V	E	A	L	L	G	A	L	D	D	A	N	L	R	P	S	D	I	D	M	I	A	T	A	T	V	T	G	V	A	V	P	S	L	D	A	R	I	A	G	R	L	G	L	R	P	D	V	R	R	M	P	L	F
Template Known Secondary structure																		T	T			G	G	G		S							S	S				S	S											T			T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		92	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		N	N	.	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K
Query Conservation				.
Alig confidence				.																																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	G	S	V	A	G	A	A	G	V	A	R	L	R	D	Y	L	R	G	A	P	D	D	V	A	V	L	V	S	V	E	L	C	S	L	T	Y	P	A	V	K	P	T	V	S	S	L	V	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		G	G	G														T	T		T	T											G	G	G	G	G	G	G			S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	F	G	D	G	A	A	A	V	V	A	V	G	D	R	R	A	E	Q	V	R	A	G	G	P	D	I	L	D	S	R	S	S	L	Y	P	D	S	L	H	I	M	G	W	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				B																			T			S												T	T		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		271	.	.	.	.	.	.	.	.												280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	I	K	V	V	G	Y	D	.	.	.	.	.	.	.	.	.	.	.	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	S	H	G	L	R	L	R	L	S	P	D	L	T	N	L	I	E	R	Y	L	A	N	D	V	T	T	F	L	D	A	H	R	L	T	K	D	D	I	G	A	W	V	S	H	P	G	G	P	K	V	I	D	A	V	A	T	S	L
Template Known Secondary structure				T	T								T	T																			T	T	T			G	G	G																					T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	.	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K
Query Conservation																																				.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		A	L	P	P	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	L	T	W	R	S	L	G	E	I	G	N	L	S	S	A	S	I	L	H	I	L	R	D	T	I	.	.	.	.	.	.	.	.	E
Template Known Secondary structure		T			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												B		G	G	G											.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.																			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.									.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	P	P	S	G	S	A	G	L	M	L	A	M	G	P	G	F	C	T	E	L	V	L	L	R
Template Known Secondary structure		T				T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D