Job Description P32020 Confidence 99.95% Date Tue Jul 30 13:21:56 BST 2013 Rank 30 Aligned Residues 275 % Identity 23% Template c4ewgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:beta-ketoacyl synthase; PDBTitle: crystal structure of a beta-ketoacyl synthase from burkholderia2 phymatum stm815 Resolution 2.25 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.					.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	.	V	E	.	.	.	.	Q	A	C	V	G	Y	V	Y	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	M	Y	A	V	R	A	S	E	L	A	L	A	D	A	G	F	A	G	D	E	S	I	S	D	G	R	M	G	V	A	Y	G	S	S	S	G	S	V	E	P	I	R	A	F	G	T	M	L	E	S	G	S	M	T	D	V	T	S
Template Known Secondary structure																		T		T	T		G	G	G	G	T	T	T								S																				T	T			T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
									69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	T	S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																	.
Template Conservation																									.
Template Sequence		N	S	Y	V	Q	M	M	P	H	T	T	A	V	N	V	S	L	F	W	D	L	K	G	.	R	I	V	P	T	S	S	A	C	A	S	G	S	Q	A	I	G	Y	A	Y	E	N	I	A	M	G	K	Q	T	L	M	L	A	G	G	A
Template Known Secondary structure		T						S	T	T										T	T			S	.								G	G	G															T	T	S		S
Template Predicted Secondary structure																									.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		E	K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	.	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H
Query Conservation																								.
Alig confidence																								.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	L	S	G	P	A	V	A	V	F	D	T	L	Y	A	T	S	T	R	N	D	E	P	H	L	T	P	R	P	F	D	A	K	R	D	G	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	T		B				T	T		G	G	G				T	T	B	T	T				B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	E	G	A	A	T	L	V	L	E	E	Y	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																231	.	.	.	.	.	.	.	.	240	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D
Query Conservation
Alig confidence													.																				.	.	.	.	.	.	.
Template Conservation													.																				.	.	.	.	.	.	.
Template Sequence		H	A	K	A	R	G	A	T	I	H	A	.	E	I	V	G	F	G	C	N	S	D	G	A	H	M	T	Q	P	T	A	.	.	.	.	.	.	.	S	T	M	A	R	A	M	Q	L	A	L	E	D	A	K	L	D	A	N	A	I	A
Template Known Secondary structure						T	T						.											S	S		S	S	S				.	.	.	.	.	.	.														T	T			G	G	G
Template Predicted Secondary structure													.																				.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.								.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		V	I	E	L	H	D	C	F	S	V	N	.	.	.	.	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		Y	V	N	A	H	G	T	S	T	D	R	G	D	V	A	E	S	Q	A	T	A	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	E	R	M	P	I	S	S	L	K	S	Y	V	.	.	G	H	T
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T						T					.	.		B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.																			320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	A	C	G	A	L	E	A	W	W	T	I	E	M	M	K	R	N	W	Y	A	P	T	L	N	L	T	E	V	D	P	A	C	A	P	L	D	Y	I	R	G	E	A	R	A	I	D	A	E	Y	V	M	S	N	N	F	A	F	G
Template Known Secondary structure		G	G	G																T						T	T			S	B		T	T	S								S	S							S									G	G
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	V	V	T	L	Y	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	T	S	L	I	F	R	R
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D