Job Description P32020 Confidence 100.00% Date Tue Jul 30 13:21:56 BST 2013 Rank 15 Aligned Residues 339 % Identity 20% Template c4egvC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystal structure of a monomeric scp2-thiolase like protein type 12 (stlp1) from mycobacterium smegmatis Resolution 2.71 Å Model Dimensions (Å) X:55.362 Y:60.839 Z:54.528

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		R	R	V	F	V	V	G	V	G	M	T	K	F	M	K	P	G	G	E	N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	.	D	S	T
Query Conservation																																																										.
Alig confidence															.	.	.	.																																								.
Template Conservation															.	.	.	.
Template Sequence		R	T	P	V	I	V	G	V	G	Q	F	T	E	.	.	.	.	R	Y	R	G	X	S	S	V	E	L	A	T	E	A	A	K	A	A	L	H	D	C	G	A	D	A	D	T	V	A	R	A	I	D	T	V	A	G	T	R	Q	F	S
Template Known Secondary structure		T													.	.	.	.																						T		S								T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R	G	S	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	P	R	S	V	A	R	N	I	G	A	D	P	A	H	A	V	L	E	V	I	G	G	Q	S	P	Q	H	L	A	T	E	F	G	G	K	I	A	A	G	E	N	D	V	V	L	I	F	G	S	E	N	T	S	E	Y	T	I	R
Template Known Secondary structure												T				S							S	S	T	T															T	T	S		S														S	G	G
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	.	.	.	.	V	E	H	F	A	K	I	G	W
Query Conservation																																																	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	L	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	V	Q	Y	G	L	L	E	N	A	R	R	A	R	L	G	L	S	V	A	D	Y	R	L	A	X	A	E	L	F	A
Template Known Secondary structure		G	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.																								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	.	.	.	.	K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																	.
Template Conservation																																														.
Template Sequence		P	F	S	K	V	A	A	K	N	P	Y	S	S	A	P	T	E	R	S	V	E	E	L	L	T	V	T	A	S	N	R	X	I	V	D	P	Y	P	R	L	X	V	A	Q	.	V	N	Q	G	A	A	L	L	X	X	S	V	E	S	A
Template Known Secondary structure											T	T	S	S	S											S			S	S	S					T	T			G	G	G				.
Template Predicted Secondary structure																																														.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I
Query Conservation
Alig confidence											.																				.	.
Template Conservation											.																				.	.
Template Sequence		R	K	L	G	V	P	E	E	K	.	W	V	Y	L	R	G	H	A	D	X	K	E	P	K	L	L	E	R	A	.	.	D	I	G	A	S	P	A	S	V	T	A	V	N	E	A	L	R	V	A	G	I	G	L	D	D	V	A	A	F
Template Known Secondary structure				T	T			G	G	G	.															G	G	G		S	.	.		T	T																	T			G	G	G
Template Predicted Secondary structure											.																				.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	Y	S	C	F	P	F	P	V	F	N	I	C	D	G	T	G	L	A	T	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	G	L	T	L	T	G	G	L	P	F	F	G	G	L	G	N	N	Y	S	X
Template Known Secondary structure						S	S	S														T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S		S	S								S		S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	.	G	L	G	G	A	V	V	V	T	L	Y
Query Conservation																																.
Alig confidence																	.	.	.	.	.	.	.									.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		H	G	I	A	E	A	V	N	E	X	R	D	K	P	G	.	.	.	.	.	.	.	Q	F	A	L	V	G	A	N	G	G	I	A	S	K	Y	S	V	G	I	Y
Template Known Secondary structure														S	T	T	.	.	.	.	.	.	.										T	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.								.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D