Job Description P32020 Confidence 100.00% Date Tue Jul 30 13:21:56 BST 2013 Rank 14 Aligned Residues 354 % Identity 21% Template c4e1lC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acetoacetyl-coa thiolase 2; PDBTitle: crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium2 difficile Resolution 2.00 Å Model Dimensions (Å) X:63.074 Y:54.431 Z:45.705

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	R	R	V	F	V	V	G	V	G	M	T	K	F	M	K	.	P	G	G	E	N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D	S
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		M	K	D	V	V	I	V	S	A	V	R	T	P	I	G	S	F	G	G	V	F	K	N	T	S	A	V	Q	L	G	T	I	A	V	K	E	A	I	S	R	V	G	L	N	L	S	E	I	D	E	V	I	I	G	N	V	L	Q	T	G
Template Known Secondary structure																		T	T	S	T	T	T	T	S																	T	T			G	G	G									S	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		70	.	.			.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure					.	.													.
Query SS confidence					.	.													.
Query Sequence		T	S	G	.	.	Q	R	A	I	Y	H	S	L	G	L	T	G	.	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R
Query Conservation					.	.													.
Alig confidence					.	.													.
Template Conservation
Template Sequence		L	G	Q	N	V	A	R	Q	I	A	I	N	A	G	I	P	N	S	V	P	S	Y	T	V	N	K	L	C	G	S	G	L	K	S	V	Q	L	A	A	Q	S	I	T	S	G	E	N	D	V	V	I	A	G	G	T	E	N	M	S	Q
Template Known Secondary structure		T	T											T	T			T	T	S								G	G	G															T	T	S		S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		A	P	Y	I	V	P	Y	H	M	G	I	T	A	E	N	I	A	T	K	F	E	F	T	R	E	M	Q	D	K	.	.	.	.	L	A	L	E	S	Q	N	K	A	E	N	A	I	K	N	N	R	F	K	E	E	I	V	P	V	D	V
Template Known Secondary structure		S																				T									.	.	.	.															T	T	T	T	T	T	T	B
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	.	.	.	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q
Query Conservation																																.	.	.
Alig confidence									.																							.	.	.
Template Conservation									.
Template Sequence		L	G	K	I	E	T	I	.	D	K	D	E	Y	P	K	L	G	M	T	F	E	G	L	S	K	L	K	P	A	F	K	K	D	G	T	V	T	A	G	N	A	S	G	I	N	D	G	A	A	M	L	I	L	M	S	Q	Q	K	A	D
Template Known Secondary structure									.		S		S				T	T								T	S			S	S	S	T	T		S			S	S	S	B
Template Predicted Secondary structure									.
Template SS confidence
		205	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E
Query Conservation
Alig confidence										.															.	.	.	.	.	.	.	.	.	.
Template Conservation										.															.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	G	I	R	P	L	A	.	K	I	K	S	Y	A	S	A	G	V	E	P	E	V	.	.	.	.	.	.	.	.	.	.	M	G	T	G	P	I	P	A	T	R	K	A	L	K	K	A	G	L	S	I	N	D	I	D	L	I	E
Template Known Secondary structure				T				S		.												G	G	G	.	.	.	.	.	.	.	.	.	.	T	T		T													T			G	G	G		S
Template Predicted Secondary structure										.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	E	A	F	A	A	Q	A	L	A	V	K	N	E	L	Q	I	D	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	A	R
Template Known Secondary structure					S	B											T	T			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	B	S	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.																			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		I	L	V	T	L	I	Y	E	M	Q	K	R	K	V	E	T	G	L	.	.	.	.	.	.	A	T	L	C	I	G	G	G	Q	G	I	S	M	V	V	S	R
Template Known Secondary structure														T		S				.	.	.	.	.	.					S	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.							.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D