Job Description P32020 Confidence 100.00% Date Tue Jul 30 13:21:56 BST 2013 Rank 9 Aligned Residues 359 % Identity 20% Template c4dd5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: biosynthetic thiolase (thla1) from clostridium difficile Resolution 1.25 Å Model Dimensions (Å) X:77.135 Y:60.430 Z:51.975

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	R	R	V	F	V	V	G	V	G	M	T	K	F	M	K	.	P	G	G	E	N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D	S
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		M	R	E	V	V	I	A	S	A	A	R	T	A	V	G	S	F	G	G	A	F	K	S	V	S	A	V	E	L	G	V	T	A	A	K	E	A	I	K	R	A	N	I	T	P	D	M	I	D	E	S	L	L	G	G	V	L	T	A	G
Template Known Secondary structure																		T	T	S	T	T	T	T	S																	T	T			G	G	G									S			T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		70	.			.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure				.	.													.
Query SS confidence				.	.													.
Query Sequence		T	S	.	.	G	Q	R	A	I	Y	H	S	L	G	L	T	.	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R
Query Conservation				.	.													.
Alig confidence				.	.													.
Template Conservation
Template Sequence		L	G	Q	N	I	A	R	Q	I	A	L	G	A	G	I	P	V	E	K	P	A	M	T	I	N	I	V	C	G	S	G	L	R	S	V	S	M	A	S	Q	L	I	A	L	G	D	A	D	I	M	L	V	G	G	A	E	N	M	S	M
Template Known Secondary structure		S		S										T	T			T	T	S								G	G	G																T	S		S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	Y	L	V	P	S	A	R	Y	G	A	R	M	G	D	A	A	F	V	D	S	M	I	K	D	G	L	S	D	I	F	N	N	Y	H	M	G	I	T	A	E	N	I	A	E	Q	W	N	I	T	R	E	E	Q	D	E	L	A	L
Template Known Secondary structure							T	T	T	T	T				S	S												T	S			T	T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.																						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		K	N	H	K	H	S	V	N	N	T	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	.	.	.	L	T	I	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		A	S	Q	N	K	A	E	K	A	Q	A	E	G	K	F	D	E	E	I	V	P	V	V	I	K	D	T	V	V	D	K	D	E	Y	I	K	P	G	T	T	M	E	K	L	A	K	L	R	P	A	F	K	K	D	G	T	V	T	A	G
Template Known Secondary structure													T	T	T	T	T	T	T	B												S		S				T	T											B	S	S	S	T	T		S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K
Query Conservation
Alig confidence																															.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	S	G	I	N	D	G	A	A	M	L	V	V	M	A	K	E	K	A	E	E	L	G	I	E	P	L	A	.	T	I	V	S	Y	G	T	A	G	V	D	P	K	I	M	G	.	.	.	.	.	.	.	.	.	.	Y	G	P	V
Template Known Secondary structure		T	B																						T				S		.												G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure																															.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.											.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	T	K	K	A	L	E	A	A	N	M	T	I	E	D	I	D	L	V	E	A	N	E	A	F	A	A	Q	S	V	A	V	I	R	D	L	N	I	D	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T			G	G	G		S							S	B												T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		K	V	N	V	N	G	G	A	I	A	I	G	H	P	I	G	C	S	G	A	R	I	L	T	T	L	L	Y	E	M	K	R	R	D	A	.	.	.	.	.	.	.	K	T	G	L	A	T	L	C	I	G	G	G	M	G	T	T	L	I
Template Known Secondary structure		S	B	S	T	T																													T		.	.	.	.	.	.	.	S									T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.								.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		403	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		394	.	.