Job Description P32020 Confidence 99.92% Date Tue Jul 30 13:21:56 BST 2013 Rank 46 Aligned Residues 279 % Identity 22% Template c4b3yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: cryo-em structure of the mycobacterial fatty acid synthase Resolution 7.50 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	.	.	.	.	.	.	.	.	Q	A	C	V	G	Y	V	Y	G	D	S	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	N	I	V	A	T	V	D	A	F	L	S	S	G	F	T	P	T	E	L	M	R	W	V	H	P	S	Q	V	A	S	T	Q	G	T	G	M	G	G	M	T	S	M	Q	T	M	Y	H	G	N	L	L	G	R	A	K	P	N	D	I
Template Known Secondary structure												T	T	S		S		G	G	G					S		G	G	G								S	S															T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		2650	.	.	.	.	.	.	.	.	.	2660	.	.	.	.	.	.	.	.	.	2670	.	.	.	.	.	.	.	.	.	2680	.	.	.	.	.	.	.	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.	.	.	.	.	.	.	.	.
												73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.													.
Template Conservation																								.
Template Sequence		L	Q	E	V	L	P	N	V	V	A	A	H	V	M	Q	S	Y	V	G	G	Y	G	.	A	M	V	H	P	V	G	A	C	A	T	A	A	V	S	V	E	E	G	V	D	K	I	K	L	G	K	A	D	L	V	I	A	G	G	F	D
Template Known Secondary structure					T	S	T	T										T	T				S	.						B		T	T																T	T	S		S
Template Predicted Secondary structure																								.
Template SS confidence
		2710	.	.	.	.	.	.	.	.	.	2720	.	.	.	.	.	.	.	.	.	2730	.		.	.	.	.	.	.	.	.	2740	.	.	.	.	.	.	.	.	.	2750	.	.	.	.	.	.	.	.	.	2760	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		K	M	E	R	G	S	I	G	.	.	.	.	.	.	.	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	T	L	E	A	I	I	G	F	G	D	M	A	A	T	A	D	T	E	M	M	R	A	K	G	I	S	D	S	K	F	S	R	A	N	D	R	R	R	L	G	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T		B									T	T			T	T	T	S			S	S	B	T	T				B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2769	2770	.	.	.	.	.	.	.	.	.	2780	.	.	.	.	.	.	.	.	.	2790	.	.	.	.	.	.	.	.	.	2800	.	.	.	.	.	.	.	.	.	2810	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	V	E	H	F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	G	G	G	T	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																					2813	.	.	.	.	.	.	2820	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	.	.	.	.	.	.	.	S	K	E	A	A	R	R	C
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																			.										.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																			.										.	.	.	.	.
Template Sequence		L	A	R	G	D	L	A	L	K	M	G	L	P	V	L	A	V	.	V	G	Y	A	Q	S	F	A	D	.	.	.	.	.	G	V	H	T	S	I	P	A	P	G	L	G	A	L	G	A	A	R	G	G	R	E	S	T	L	A	R	S
Template Known Secondary structure												T							.										.	.	.	.	.						S	S					G	G	G	G	G	S	T	T	G	G	G	S
Template Predicted Secondary structure																			.										.	.	.	.	.
Template SS confidence
		2822	.	.	.	.	.	.	.	2830	.	.	.	.	.	.	.	.		.	2840	.	.	.	.	.	.	.						.	.	2850	.	.	.	.	.	.	.	.	.	2860	.	.	.	.	.	.	.	.	.	2870	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	.	.	.	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N
Query Conservation																																										.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.										.	.	.																	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		L	A	Q	L	G	V	G	A	D	D	I	A	V	I	S	K	H	D	T	S	T	.	.	.	.	.	.	.	.	.	.	L	A	N	D	P	N	E	T	E	L	H	E	R	I	A	D	S	M	G	R	A	P	G	N	P	L	F	I	.
Template Known Secondary structure				T	T	T			G	G	G												.	.	.	.	.	.	.	.	.	.	T	T																T	T			T	T						.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		2876	.	.	.	2880	.	.	.	.	.	.	.	.	.	2890	.	.	.	.	.	.											.	.	.	2900	.	.	.	.	.	.	.	.	.	2910	.	.	.	.	.	.	.	.	.	2920	.	.	.	.
		346	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.																									.	.	.	380
Predicted Secondary structure									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	G	G	L	I	S	.	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	Q
Query Conservation									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	V	S	Q	K	T	L	T	G	H	A	K	G	G	A	A	V	F	Q	M	M	G	L	C	Q	I	L	R	D	G	V	I	P	P	N	R	S	L	D	C	V	D	D	E	L	A	T	S	G	H	F	V	W	V	R	E	P	L	D
Template Known Secondary structure		.	.			S						B		S	T	T																		B				T	T		S	S	B		G	G	G	G	G		S	S					S	S		B
Template Predicted Secondary structure		.	.
Template SS confidence
				2925	.	.	.	.	2930	.	.	.	.	.	.	.	.	.	2940	.	.	.	.	.	.	.	.	.	2950	.	.	.	.	.	.	.	.	.	2960	.	.	.	.	.	.	.	.	.	2970	.	.	.	.	.	.	.	.	.	2980	.	.
		381	.	.				.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		V	P	G	.	.	.	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		L	R	G	K	F	P	L	K	A	G	L	V	T	S	L	G	F	G	H	V	S	G	L	V	A	L
Template Known Secondary structure				T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		2983	.	.	.	.	.	.	2990	.	.	.	.	.	.	.	.	.	3000	.	.	.	.	.	.	.	.