Job Description P32020 Confidence 99.11% Date Tue Jul 30 13:21:56 BST 2013 Rank 120 Aligned Residues 257 % Identity 17% Template c3vs9F_ PDB info PDB header:transferase Chain: F: PDB Molecule:type iii polyketide synthase; PDBTitle: crystal structure of type iii pks arsc mutant Resolution 1.99 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.
Predicted Secondary structure																																								.																			.
Query SS confidence																																								.																			.
Query Sequence		Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D	S	T	S	G	.	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	.	N	N
Query Conservation																																								.																			.
Alig confidence																						.	.	.																.																			.
Template Conservation																						.	.	.
Template Sequence		Y	A	K	V	V	G	K	G	L	E	Q	M	F	E	G	T	L	E	A	P	.	.	.	D	D	L	I	H	V	T	C	S	G	Y	L	A	P	S	P	A	E	R	M	V	A	D	R	G	W	F	E	T	T	V	T	H	S	Y	N	M
Template Known Secondary structure														T	T	T			S			.	.	.	S							S	S				S	S										T	T		T	T								S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	.	.	.	.	.	.	C	V	L	A	L	G	F	E	K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	C	Y	G	A	F	P	A	I	K	M	A	H	G	M	L	A	S	A	Q	W	G	A	T	P	P	K	T	R	V	D	I	A	H	T	E	L	M	S	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	T																		T	S	S	S													G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		E	E	V	M	K	S	K	P	V	F	D	.	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S
Query Conservation													.
Alig confidence		.	.	.	.	.							.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	N	N	I	A	E	S	R	V	D	N	I	I	S	A	T	L	F	S	D	G	L	I	K	Y	S	V	Y	P	E	D	E	L	R	R	Q	G	L	R	G	L	R	I	L	A	M	S	E	H	L	L	P	D	S	A	D
Template Known Secondary structure		.	.	.	.	.				S			S										B																		T	T															S	S		G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		266	.	.	.												270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query Sequence		T	F	E	E	.	.	.	.	.	.	.	.	.	.	.	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	.	.	.	V	I	E	L	H	D	C	F	S	V	N
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation
Template Sequence		T	M	T	W	V	P	G	S	H	Q	F	V	M	T	L	S	P	L	V	P	A	I	I	K	R	H	V	R	A	F	A	V	D	L	L	R	R	A	G	M	D	F	E	R	D	K	D	A	L	S	F	A	I	H	P	G	G	P	K	I
Template Known Secondary structure		G							S	S	S							T	T																				T	T							G	G	G									S	T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	.	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W
Query Conservation																																											.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	H	V	Q	E	E	L	G	L	A	E	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	I	S	K	S	V	F	L	E	N	G	N	M	S	S	S	T	I	P	H	I	L	K	A	Y	L	E
Template Known Secondary structure										T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												B		G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.																			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R	M
Query Conservation
Alig confidence				.	.						.	.	.	.	.	.	.
Template Conservation				.	.						.	.	.	.	.	.	.
Template Sequence		E	A	.	.	T	V	G	T	R	.	.	.	.	.	.	.	I	A	C	L	G	F	G	P	G	L	T	A	A	G	L	V	L	E	K
Template Known Secondary structure			S	.	.		T	T			.	.	.	.	.	.	.								T	T	T
Template Predicted Secondary structure				.	.						.	.	.	.	.	.	.
Template SS confidence
		383	.			.	.	.	.	.								390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D