Job Description P32020 Confidence 100.00% Date Tue Jul 30 13:21:56 BST 2013 Rank 10 Aligned Residues 361 % Identity 23% Template c3goaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-ketoacyl-coa thiolase; PDBTitle: crystal structure of the salmonella typhimurium fada 3-2 ketoacyl-coa thiolase Resolution 1.70 Å Model Dimensions (Å) X:67.354 Y:53.269 Z:48.121

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																							.
Query SS confidence																	.	.																							.
Query Sequence		R	R	V	F	V	V	G	V	G	M	T	K	F	M	K	.	.	P	G	G	E	N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	.	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D
Query Conservation																	.	.																							.
Alig confidence																	.	.																							.
Template Conservation
Template Sequence		E	Q	V	V	I	V	D	A	I	R	T	P	X	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	X	R	S	L	L	A	R	N	P	S	L	T	A	A	T	L	D	D	I	Y	W	G	C	V	Q	Q	T
Template Known Secondary structure																	T	T	T		T	T	T	T	S																		T	T	S		G	G	G									S			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		69	70	.	.				.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure						.	.	.												.
Query SS confidence						.	.	.												.
Query Sequence		S	T	S	G	.	.	.	Q	R	A	I	Y	H	S	L	G	L	T	.	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M
Query Conservation						.	.	.												.
Alig confidence						.	.	.												.
Template Conservation
Template Sequence		L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E	I	P	H	S	V	P	A	V	T	V	N	R	L	C	G	S	S	X	Q	A	L	H	D	A	A	R	X	I	X	T	G	D	A	Q	V	C	L	V	G	G	V	E	H	X
Template Known Secondary structure		G	G	G	T	T	T									T	T			T	T	S								G	G	G															T	T	S		S										T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																								.	.	.															.
Query SS confidence																								.	.	.															.
Query Sequence		E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	.	.	.	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	.	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H
Query Conservation																								.	.	.															.
Alig confidence																								.	.	.															.
Template Conservation
Template Sequence		G	H	V	P	X	S	H	G	V	D	F	H	P	G	L	S	G	X	X	G	L	T	A	E	X	L	S	R	L	H	G	I	S	R	E	X	Q	D	Q	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	G	A	F	K	T	E
Template Known Secondary structure		T	T	S		T	T	T	T					T	T																T	T																								T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		181	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure													.	.																												.	.	.	.
Query SS confidence													.	.																												.	.	.	.
Query Sequence		F	A	K	I	G	W	K	N	H	K	H	.	.	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	.	.	.	.	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A
Query Conservation													.	.																												.	.	.	.
Alig confidence													.	.																												.	.	.	.
Template Conservation
Template Sequence		I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	S	T	L	R	P	A	F	D	P	V	S	G	T	V	T	A	G	T	S	S	A	L	S	D	G	A	A	A	X
Template Known Secondary structure		B								T	T	S							S		T	T			T	T							T	T	S			S	S		T	T	T					G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L
Query Conservation
Alig confidence																			.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	X	S	E	S	R	A	R	E	L	G	L	K	P	R	A	.	R	I	R	S	X	A	V	V	G	C	D	P	S	I	X	G	Y	.	.	.	.	.	.	.	.	.	.	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L
Template Known Secondary structure												T	T						.												T	T	S	T	T		.	.	.	.	.	.	.	.	.	.	T													T
Template Predicted Secondary structure																			.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	S	D	I	D	V	F	E	X	N	E	A	F	A	A	Q	I	L	P	C	I	K	D	L	G	L	X	E	Q	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	N	L	N	G	G	A	I	A	L	G
Template Known Secondary structure			G	G	G		S							S	B											T	T		G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	S	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																.	.	.	.	.	.	.	.	.	340	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R	M
Query Conservation
Alig confidence																							.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		H	P	L	G	C	S	G	A	R	I	S	T	T	L	I	N	L	X	E	R	K	.	.	.	.	.	.	.	D	A	Q	F	G	L	A	T	X	C	I	G	L	G	Q	G	I	A	T	V	F	E	R
Template Known Secondary structure																						T	.	.	.	.	.	.	.	T		S									T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.								.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D