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Job DescriptionP32020
Confidence99.86%DateTue Jul 30 13:21:56 BST 2013
Rank67Aligned Residues290
% Identity19%Templatec3fk5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:3-oxoacyl-synthase iii; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase iii, fabh (xoo4209) from xanthomonas oryzae pv.3 oryzae kacc10331
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20......... 30..
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Query Sequence  PRLRRVFVVGVGMTKFMKPGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ENS
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Template Sequence  MLFQNVSIAGLAH. . VDAPHTLTSKEINGRLQPTYDRLGIKTDVLGDVAGIHARRLWDQD
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   1........10... ......20.........30.........40.........50........
 
   33......40.........50.........60.........70..... ....80.... .....
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Query Sequence  RDYPDMAKEAGQKALEDAQIPYSAVEQACVGYVYGDSTSGQRA. . IYHSLGLTG. IPIIN
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Template Sequence  VQASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFD
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T

GGG

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   5960.........70.........80.........90.........100.........110........
 
   90.........100.........110.........120.........130.........140.........
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Query Sequence  VNNNCSTGSTALFMAHQLIQGGLANCVLALGFEKMERGSIGTKFSDRTTPTDKHIEVLID
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Template Sequence  VANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVT. . . . . . . .
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GGGTTS
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   119120.........130.........140.........150.........160.........170
 
   150.........160.........170.........180.........190.........200.........
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Query Sequence  KYGLSAHPITPQMFGYAGKEHMEKYGTKVEHFAKIGWKNHKHSVNNTYSQFQDEYSLEEV
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Template Sequence  . . . . . . . . . . EEEFRNELAALT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   171........180..
 
   210.........220.........230.........240.........250.........260.........
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Query Sequence  MKSKPVFDFLTILQCCPTSDGAAAAILSSEEFVQQYGLQSKAVEIVAQEMMTDLPSTFEE
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Template Sequence  . . . . . . . . . . . . . . . . . LGCGAAAMVMARTELVPD. . . . APRYKGGVTRSATEWNKLCRG
Template Known Secondary structure  .................B

GGGSTT....S

GGGGGG
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   183......190.........200 .........210.........220.
 
   270....... ..280.........290.........300.........310.........320.
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Query Sequence  KSIIKVVG. . . . . . . . YDMSKEAARRCYEKSGLTPNDVDVIELHDCFSVNELITYEALGL
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Template Sequence  NLDRMVTDTRLLLIEGIKLAQKTFLAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGI
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GGG
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   222.......230.........240.........250.........260.........270.........280.
 
   322.......330.........340.........350.........360.........370.........380.
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Query Sequence  CPEGQGGTLVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKRQV
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Template Sequence  DPA. . . . . . . . . . . . . . . . KVMTI. . . . FGEHGNIGPASVPIVLSKLKE. . . . . . . LGRL
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GG................GB


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B
GGG.......TT

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   282.. ..... 290.........300.........310 ....
 
   382.......390.........400....
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Query Sequence  PGAKVALQHNLGLGGAVVVTLYR
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Template Conservation    
  
     
 
       
 
Template Sequence  KKGDRIALLGIGSGLNCSMAEVV
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TT
TTT
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   315....320.........330.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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