Job Description P32020 Confidence 99.94% Date Tue Jul 30 13:21:56 BST 2013 Rank 34 Aligned Residues 307 % Identity 28% Template c3e60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein ] synthase ii; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase ii from bartonella henselae Resolution 1.95 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.																																						.	.	.	.	.	.	30	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	V	F	V	V	G	V	G	M	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	M	K	P	G	G	E	N	S	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	R	V	V	I	T	G	L	G	L	V	S	P	L	A	G	D	V	E	Y	S	W	K	R	L	L	E	G	K	S	G	V	R	R	I	T	E	F	D	V	S	D	L	S	C	Q	I	A	A	R	I	P	V	G	D	G	T	N	G
Template Known Secondary structure															S	S		S	S										T	T									S	S			T	T	S	S									B	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		34																		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	.	.	.	.	.	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D	S	T	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		T	Y	N	A	D	L	H	M	E	S	K	E	Q	R	K	V	D	A	F	I	V	Y	A	I	A	A	A	D	Q	A	L	A	D	A	E	W	F	P	K	S	D	E	D	Q	I	C	T	G	V	L	I	G	S	G	I	G	G	I	E	G
Template Known Secondary structure			B		G	G	G	T	S						T	T	S																			T					S						T								S	S		S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		72																													.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																											.
Template Sequence		I	V	E	A	G	Y	T	L	R	D	K	G	P	R	R	I	S	P	F	F	I	P	G	R	L	I	N	L	A	S	G	Y	V	S	I	K	Y	G	L	R	G	.	P	N	H	S	V	V	T	A	C	S	T	G	A	H	A	I	G	D
Template Known Secondary structure														G	G	G	S		T	T	T	T	T	T	T		T	T											T			S	.								G	G	G
Template Predicted Secondary structure																																											.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	.	.	.	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.																							.
Template Conservation																																																													.
Template Sequence		A	A	R	L	I	A	L	G	D	A	D	V	M	L	A	G	G	T	E	S	P	I	N	R	I	S	L	A	G	F	S	A	C	R	A	L	S	T	C	R	N	D	D	P	E	R	A	S	R	P	Y	D	V	D	R	D	G	F	V	.
Template Known Secondary structure								T	T	S		S												S										T	T		B			S		T	T	S	G	G	G	S			T	T	B	T	T			S	B		.
Template Predicted Secondary structure																																																													.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	L	T
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M
Query Conservation
Alig confidence		.	.	.	.	.	.																										.											.	.	.	.	.
Template Conservation		.	.	.	.	.	.																										.											.	.	.	.	.
Template Sequence		.	.	.	.	.	.	M	G	E	G	A	A	I	V	V	L	E	E	L	E	H	A	K	K	R	G	A	R	I	Y	A	.	E	I	I	G	Y	G	L	S	G	D	.	.	.	.	.	A	Y	H	I	T	A	P	S	E	S	G	E	G
Template Known Secondary structure		.	.	.	.	.	.	B	B																	T	T						.											.	.	.	.	.		S		S	S	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.																										.											.	.	.	.	.
Template SS confidence
								239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	R	S	M	M	A	A	L	K	R	A	Q	V	N	V	S	E	L	D	Y	I	N	A	H	G	T	S	T	M	A	D	V	I	E	L	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	L	G	Y	Y	A	P
Template Known Secondary structure														T			G	G	G										S	S	T	T									.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.													.	.	.	.	330	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																					.	.	.	.	380
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	K	R	Q
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		Q	V	S	M	S	S	T	K	S	S	I	.	.	G	H	L	L	G	A	A	G	A	A	E	A	I	F	C	V	L	A	I	R	D	N	I	A	P	A	T	L	N	L	E	N	P	S	I	E	T	K	I	D	L	V	P	H	K	P	R
Template Known Secondary structure		G						T					.	.		B		G	G	G																T					B	T	T		S	S	B	S	S			S	S	B			B	S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	K	I	D	T	V	L	S	N	S	F	G	F	G	G	T	N	A	S	L	V	M	R	R
Template Known Secondary structure															T	T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.