 |
| Job Description | P32020 | | Confidence | 99.97% | Date | Tue Jul 30 13:21:56 BST 2013 |
| Rank | 21 | Aligned Residues | 107 |
| % Identity | 20% | Template | c3bkrA_ |
| PDB info |
PDB header:lipid binding protein | Chain: A: PDB Molecule:sterol carrier protein-2 like-3; |
PDBTitle: crystal structure of sterol carrier protein-2 like-3 (scp2-2 l3) from aedes aegypti
|
| Resolution | 1.40 Å |
|
 |
|   |   |
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | |
|
|
|
|
|
|
|
. |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
| Query Sequence |   |
G | F | K | A | N | L | V | F | K | E | I | E | K | K | L | E | E | E | G | E | Q | F | V | K | K | I | G | G | I | F | A | F | K | V | K | D | G | P | G | G | K | E | A | T | W | V | V | D | V | K | N | . |
. |
. |
. |
. |
. |
. |
. |
G |
| Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   | . | . | . | . | . | . | . | . |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
| Template Conservation |   |
  |
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   | . |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   | . |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
| Template Sequence |   |
A | L | K | T | D | Q | I | L | D | K | L | N | E | K | L | A | Q | V | . |
D | R | S | K | R | S | F | T | V | I | L | F | V | H | L | R | . |
Q | E | G | K | V | V | R | S | V | V | L | D | F | N | D | L | K | I | S | E | I | E | L | A |
| Template Known Secondary structure |   |
|
| G | G | G | G | T |  |  |  |  |  |  |  |  |  |  | S | . |
| S | S | S |
|
|
|
|
|  |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  | S | T | T |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
482 | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | G | S | V | L | P | N | S | D | K | K | A | D | C | T | I | T | M | A | D | S | D | L | L | A | L | M | T | G | K | M | N | P | Q | S | A | F | F | Q | G | K | L | K | I | A | G | N | M | G | L | A | M | K | L | Q | N | L |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
| Template Sequence |   |
V | T | S | T | A | D | Y | P | A | E | R | I | D | A | S | I | T | I | D | D | N | D | F | Y | L | V | A | T | K | E | T | S | F | A | A | L | I | E | Q | G | K | V | D | I | T | G | N | K | Q | A | F | L | T | L | D | E | K |
| Template Known Secondary structure |   |
| S |
|
| S | S | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|