 |
| Job Description | P32020 | | Confidence | 28.72% | Date | Tue Jul 30 13:21:56 BST 2013 |
| Rank | 173 | Aligned Residues | 49 |
| % Identity | 20% | Template | c2jkdB_ |
| PDB info |
PDB header:gene regulation | Chain: B: PDB Molecule:pre-mrna leakage protein 1; |
PDBTitle: structure of the yeast pml1 splicing factor and its2 integration into the res complex
|
| Resolution | 2.50 Å |
|
 |
|   |   |
452 | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | K | K | I | G | G | I | F | A | F | K | V | K | D | G | P | G | G | K | E | A | T | W | V | V | D | V | K | N | G | K | G | S | V | L | P | N | S | D | K | K | A | D | C | T | I | T | M | A | D | S | D |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
| Template Sequence |   |
S | S | K | Q | H | C | V | I | Q | F | R | N | V | . |
. |
. |
R | G | I | L | K | C | Y | V | M | D | L | D | S | S | N | G | T | C | L | N | N | V | V | I | P | G | A | R | Y | I | E | L | R | S | G | D |
| Template Known Secondary structure |   |
S |
| T | T |
|  |  |  |  |  |  |  |  | . | . | . | T | T |  |  |  |  |  |  |  |  |
| S |
| S | S |
|
|  |  | T | T |  |  |
|
| T | T |
|
|  |  |
|
| T | T |
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|