Job Description P32020 Confidence 100.00% Date Tue Jul 30 13:21:56 BST 2013 Rank 5 Aligned Residues 359 % Identity 23% Template c2ibyD_ PDB info PDB header:transferase Chain: D: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystallographic and kinetic studies of human mitochondrial2 acetoacetyl-coa thiolase (t2): the importance of potassium and3 chloride for its structure and function Resolution 1.85 Å Model Dimensions (Å) X:57.263 Y:62.661 Z:46.118

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		K	S	P	R	L	R	R	V	F	V	V	G	V	G	M	T	K	F	M	K	.	P	G	G	E	N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		S	K	P	T	L	K	E	V	V	I	V	S	A	T	R	T	P	I	G	S	F	L	G	S	L	S	L	L	P	A	T	K	L	G	S	I	A	I	Q	G	A	I	E	K	A	G	I	P	K	E	E	V	K	E	A	Y	M	G	N	V
Template Known Secondary structure																						T	T	S	T	T	T	T	S																		T			G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		66	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		Y	G	D	S	T	S	.	.	G	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		L	Q	G	G	E	G	Q	A	P	T	R	Q	A	V	L	G	A	G	L	P	I	S	T	P	C	T	T	I	N	K	V	A	S	G	M	K	A	I	M	M	A	S	Q	S	L	M	C	G	H	Q	D	V	M	V	A	G	G	M	E	S
Template Known Secondary structure				T	T	S		S										T	T			T	T																									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		M	S	N	V	P	Y	V	M	N	R	G	S	T	P	Y	G	G	V	K	L	E	D	L	I	V	K	D	G	.	.	L	T	D	V	Y	N	K	I	H	M	G	S	C	A	E	N	T	A	K	K	L	N	I	A	R	N	E	Q	D	A
Template Known Secondary structure		G	G	G							S	S				T	T												T	.	.	T	B		T	T	T		S	B												T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.																										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	I	N	S	Y	T	R	S	K	A	A	W	E	A	G	K	F	G	N	E	V	I	P	V	T	V	T	V	K	G	Q	P	D	V	V	V	K	E	D	E	E	Y	K	R	V	D	F	S	K	V	P	K	L	K	T	V	F	Q	K
Template Known Secondary structure																	T	T	T	T	T	T	B								T	T	S							S		S	G	G	G	S			T	T	T	G	G	G				T	T		S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
						219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																		.															.	.	.	.	.	.	.	.
Template Conservation																																							.															.	.	.	.	.	.	.	.
Template Sequence		E	N	G	T	V	T	A	A	N	A	S	T	L	N	D	G	A	A	A	L	V	L	M	T	A	D	A	A	K	R	L	N	V	T	P	L	A	.	R	I	V	A	F	A	D	A	A	V	E	P	I	D	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T					T	T	T	B																					T	T						.												G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.															.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G
Query Conservation
Alig confidence		.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	F	P	I	A	P	V	Y	A	A	S	M	V	L	K	D	V	G	L	K	K	E	D	I	A	M	W	E	V	N	E	A	F	S	L	V	V	L	A	N	I	K	M	L	E	I	D	P	Q	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	G	G	G														T			G	G	G									S	B												T			G	G	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	V	N	I	N	G	G	A	V	S	L	G	H	P	I	G	M	S	G	A	R	I	V	G	H	L	T	H	A	L	K	.	.	.	.	.	.	.	.	.	Q	G	E	Y	G	L	A	S	I	C	N	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	G	B	S	T	T																											.	.	.	.	.	.	.	.	.	T	T										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
										373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.										.	.	.	.	.	.	410	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	V	V	V	T	L	Y	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	G	A	S	A	M	L	I	Q	K
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.