Job Description P32020 Confidence 99.62% Date Tue Jul 30 13:21:56 BST 2013 Rank 94 Aligned Residues 258 % Identity 17% Template c2h84A_ PDB info PDB header:biosynthetic protein, transferase Chain: A: PDB Molecule:steely1; PDBTitle: crystal structure of the c-terminal type iii polyketide synthase (pks2 iii) domain of 'steely1' (a type i/iii pks hybrid from dictyostelium) Resolution 2.90 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.
Predicted Secondary structure																																			.																		.
Query SS confidence																																			.																		.
Query Sequence		Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	.	D	S	T	S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	.	I	P	I	I	N	V	N	N
Query Conservation																																			.																		.
Alig confidence																																			.																		.
Template Conservation
Template Sequence		V	P	D	L	A	Q	Q	A	C	L	R	A	L	K	D	W	G	G	D	K	G	D	I	T	H	I	V	S	V	T	S	T	G	I	I	I	P	D	V	N	F	K	L	I	D	L	L	G	L	N	K	D	V	E	R	V	S	L	N	L
Template Known Secondary structure																			S		G	G	G									S	S				S	S											T			T	T								S
Template Predicted Secondary structure
Template SS confidence
		2868	.	2870	.	.	.	.	.	.	.	.	.	2880	.	.	.	.	.	.	.	.	.	2890	.	.	.	.	.	.	.	.	.	2900	.	.	.	.	.	.	.	.	.	2910	.	.	.	.	.	.	.	.	.	2920	.	.	.	.	.	.	.
			93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y
Query Conservation		.
Alig confidence		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	C	L	A	G	L	S	S	L	R	T	A	A	S	L	A	K	A	S	P	R	N	R	I	L	V	V	C	T	E	V	C	S	L	H	F	S	N	T	D	G	G	D	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G														T	T		T	T												G	G	G				S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2928	.	2930	.	.	.	.	.	.	.	.	.	2940	.	.	.	.	.	.	.	.	.	2950	.	.	.	.	.	.	.	.	.	2960	.	.	.	.	.	.	.	.	.	2970	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	A	S	S	I	F	A	D	G	S	A	A	Y	I	I	G	C	.	.	.	.	N	P	R	I	E	E	T	P	L	Y	E	V	M	C	S	I	N	R	S	F	P	N	T	E	N	A	M	V	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						B											S	.	.	.	.	S			T	T																S	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
												2974	.	.	.	.	.	2980	.	.	.	.	.	.	.	.	.	2990					.	.	.	.	.	.	.	.	.	3000	.	.	.	.	.	.	.	.	.	3010	.	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.														.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		I	I	K	V	V	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	.	.	.	.	.	D	V	I	E	L	H	D	C	F	S	V	N	E	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		D	L	E	K	E	G	W	N	L	G	L	D	A	S	I	P	I	V	I	G	S	G	I	E	A	F	V	D	T	L	L	D	K	A	K	L	Q	T	S	T	A	I	S	A	K	D	C	E	F	L	I	H	T	G	G	K	S	I	L	M
Template Known Secondary structure					T	T								T	T																					T	T	T	S		S				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		3020	.	.	.	.	.	.	.	.	.	3030	.	.	.	.	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	.	S	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L
Query Conservation																																								.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	E	N	S	L	G	I	D	P	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	T	W	D	V	Y	H	A	Y	G	N	M	S	S	A	S	V	I	F	V	M	D	H	A	R	K	S	K
Template Known Secondary structure							T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G												B		T	T												T		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3080	.	.	.	.	.	.	.	.	.	3090	.																			.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R	M	G	F
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.			.
Template Conservation			.	.	.	.	.	.	.	.			.
Template Sequence		S	.	.	.	.	.	.	.	.	L	P	.	T	Y	S	I	S	L	A	F	G	P	G	L	A	F	E	G	C	F	L	K	N	V	V
Template Known Secondary structure			.	.	.	.	.	.	.	.			.	S									T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.			.
Template SS confidence
		3122									.	.		.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D