Job Description P32020 Confidence 99.94% Date Tue Jul 30 13:21:56 BST 2013 Rank 35 Aligned Residues 277 % Identity 23% Template c2gqdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 2; PDBTitle: the crystal structure of b-ketoacyl-acp synthase ii (fabf)2 from staphylococcus aureus Resolution 2.30 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	I	V	A	A	R	E	A	V	K	D	A	Q	L	D	I	N	E	N	T	A	D	R	I	G	V	W	I	G	S	G	I	G	G	M	E	T	F	E	I	A	H	K	Q	L	M	D	K	G	P	R	R	V	S	P	F	F	V	P
Template Known Secondary structure															T				S	T	T	T	G	G	G								S	S																T		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.
Predicted Secondary structure		.	.	.	.																																																							.
Query SS confidence		.	.	.	.																																																							.
Query Sequence		.	.	.	.	T	S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	.	M
Query Conservation		.	.	.	.																																																							.
Alig confidence		.	.	.	.																.																																							.
Template Conservation																					.
Template Sequence		M	L	I	P	D	M	A	T	G	Q	V	S	I	D	L	G	A	K	G	.	P	N	G	A	T	V	T	A	C	A	T	G	T	N	S	I	G	E	A	F	K	I	V	Q	R	G	D	A	D	A	M	I	T	G	G	T	E	A	P	I
Template Known Secondary structure				S	T	T											T			S	.	S							G	G	G															T	T	S		S
Template Predicted Secondary structure																					.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	M	A	I	A	G	F	S	A	S	R	A	L	S	T	N	D	D	I	E	T	A	C	R	P	F	Q	E	G	R	D	G	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S										T	T		B						T	T	T	S			T	T	B	T	T			S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	E	G	A	G	I	L	V	I	E	S	L	E	S	A	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L
Query Conservation
Alig confidence									.											.	.	.	.	.
Template Conservation									.											.	.	.	.	.
Template Sequence		R	G	A	N	I	Y	A	.	E	I	V	G	Y	G	T	T	G	D	.	.	.	.	.	A	Y	H	I	T	A	P	A	P	E	G	E	G	G	S	R	A	M	Q	A	A	M	D	D	A	G	I	E	P	K	D	V	Q	Y	L	N	A
Template Known Secondary structure		T	T						.											.	.	.	.	.		S		S	S	S			G	G	G															T			G	G	G
Template Predicted Secondary structure									.											.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		305	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		H	D	C	F	S	.	.	.	.	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.											.							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		H	G	T	S	T	P	V	G	D	L	N	E	V	K	A	I	K	N	T	.	F	G	E	A	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	K	V	S	S	T	K	S	M	T	.	.	G	H	L	L	G	A	T
Template Known Secondary structure					S																.		G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S					T					.	.		B		T	T	T
Template Predicted Secondary structure																					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.															.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.																					.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	I	E	A	I	F	S	A	L	S	I	K	D	S	K	V	A	P	T	I	H	A	V	T	P	D	P	E	C	D	L	D	I	V	P	N	E	A	Q	D	L	D	I	T	Y	A	M	S	N	S	L	G	F	G	G	H	N	A	V
Template Known Secondary structure															T	T					B	T	T			S	B		T	T			S				B	S	S							S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		401	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Y	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	F	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D