Job Description P32020 Confidence 99.96% Date Tue Jul 30 13:21:56 BST 2013 Rank 23 Aligned Residues 282 % Identity 21% Template c2gfvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 2; PDBTitle: structure of e. coli fabf (kasii) c163q mutant Resolution 2.29 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	.	.	.	.	Q	A	C	V	G	Y	V	Y	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	Q	Y	G	I	V	A	G	V	Q	A	M	Q	D	S	G	L	E	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F
Template Known Secondary structure																		T					T	T	T	G	G	G								S	S																		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
								69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	S	T	S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.
Template Conservation																								.
Template Sequence		F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M	Y	G	L	R	G	.	P	S	I	S	I	A	T	A	Q	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E
Template Known Secondary structure							S	T	T										T	T			S	.								G	G	G																T	S		S
Template Predicted Secondary structure																								.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	S	T	P	L	G	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																					192	.	.	.	.	.	.	.	200
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S	R	P	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	R	D	G	F	V	L	G	D	G	A	G	M	L	V	L	E	E	Y	E	H	A
Template Known Secondary structure						T	T		B				T	T								T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S	B		B	B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.															.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E	K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I
Query Conservation
Alig confidence											.											.	.	.	.	.
Template Conservation											.											.	.	.	.	.
Template Sequence		K	K	R	G	A	K	I	Y	A	.	E	L	V	G	F	G	M	S	S	D	.	.	.	.	.	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V
Template Known Secondary structure					T						.											.	.	.	.	.		S		S	S	S			T	T																T			G	G	G
Template Predicted Secondary structure											.											.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		303	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		E	L	H	D	C	F	S	V	.	.	.	.	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.										.							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		N	A	H	G	T	S	T	P	A	G	D	K	A	E	A	Q	A	V	K	T	I	.	F	G	E	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	L	V	S	S	T	K	S	M	T	.	.	G	H	L	L	G
Template Known Secondary structure							S																.		G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S					T					.	.		B		G	G
Template Predicted Secondary structure																							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.															.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y	T	L	C	N	S	F	G	F	G	G	T
Template Known Secondary structure		G															S						B	T	T		S	S	B		T	T			S	B			B	S	S					S	S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		398	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	T	L	Y	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	S	L	I	F	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D