Job Description P32020 Confidence 100.00% Date Tue Jul 30 13:21:56 BST 2013 Rank 7 Aligned Residues 345 % Identity 23% Template c2c7yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-ketoacyl-coa thiolase 2; PDBTitle: plant enzyme Resolution 2.10 Å Model Dimensions (Å) X:62.673 Y:54.630 Z:52.099

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		R	L	R	R	V	F	V	V	G	V	G	M	T	K	F	M	K	.	.	P	G	G	E	N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		Y	G	D	D	V	V	I	V	A	A	H	R	T	P	L	C	K	S	K	R	G	N	F	K	D	T	Y	P	D	D	L	L	A	P	V	L	R	A	L	I	E	K	T	N	L	N	P	S	E	V	G	D	I	V	V	G	T	V	L	A
Template Known Secondary structure			T	T	T														T	T	T		T	T	T	T			T																T			G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		68	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure					.	.	.															.
Query SS confidence					.	.	.															.
Query Sequence		D	S	T	.	.	.	S	G	Q	R	A	I	Y	H	S	L	G	L	T	G	.	I	P	I	I	N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K
Query Conservation					.	.	.															.
Alig confidence					.	.	.															.
Template Conservation
Template Sequence		P	G	S	Q	R	A	S	E	C	R	M	A	A	F	Y	A	G	F	P	E	T	V	A	V	R	T	V	N	R	Q	C	S	S	G	L	Q	A	V	A	D	V	A	A	A	I	K	A	G	F	Y	D	I	G	I	G	A	G	L	E	S
Template Known Secondary structure			T	T													T	T			T	T	S								S	S			S													T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I	D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	T	N	P	M	A	W	E	K	K	F	A	Q	A	Q	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	P	M	G	V	T	S	E	N	V	A	Q	R	F	G	V	S	R	Q	E	Q	D	Q
Template Known Secondary structure		S				S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.																																.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	Q	D	E	Y	S	L	E	E	V	M	K	S
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	V	D	S	H	R	K	A	A	A	A	T	A	A	G	K	F	K	D	E	I	I	P	V	K	T	K	L	V	D	P	K	T	G	D	E	K	P	I	T	V	S	V	D	D	G	I	R	P	T	T	T	L	A	S	L	G	K	L
Template Known Secondary structure																T	T	T	T	T	T	T	B										T	T	T										S		T	T			T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		213	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		K	P	V	F	D	F	.	.	.	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E	E
Query Conservation								.	.	.
Alig confidence								.	.	.																																		.																	.
Template Conservation																																												.																	.
Template Sequence		K	P	V	F	K	K	D	G	T	T	T	A	G	N	S	S	Q	V	S	D	G	A	G	A	V	L	L	M	K	R	S	V	A	M	Q	K	G	L	P	V	L	G	.	V	F	R	T	F	A	A	V	G	V	D	P	A	I	M	G	.
Template Known Secondary structure			B	S	S	S	T	T		S		B	S	S	S	B			B																			T						.												T	T	S	T	T	.
Template Predicted Secondary structure																																												.																	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	I	I	K	V	V	G	Y	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S	V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	G	P	A	V	A	I	P	A	A	V	K	A	A	G	L	E	L	D	D	I	D	L	F	E	I	N	E	A	F	A	S	Q	F	V	Y	C	R	N	K	L	G	L	D	P	E	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														T	T			G	G	G									S	B												T			G	G	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Template SS confidence
											335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C	W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	N	V	N	G	G	A	M	A	I	G	H	P	L	G	A	T	G	A	R	C	V	A	T	L	L	H	E	M	K	.	.	.	.	.	R	R	G	K	D	C	R	F	G	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	G	B	S	T	T								B		G	G	G															.	.	.	.	.				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
															381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.						.	.	.	.	.	.	.	.	420	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	C	I	G	T	G	M	G	A	A	A	V	F	E	R	G
Template Known Secondary structure					S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.