Job Description P32020 Confidence 99.82% Date Tue Jul 30 13:21:56 BST 2013 Rank 80 Aligned Residues 253 % Identity 23% Template c1ub7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier protein] synthase; PDBTitle: the crystal analysis of beta-keroacyl-[acyl carrier protein] synthase2 iii (fabh)from thermus thermophilus. Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		N	S	R	D	Y	P	D	M	A	K	E	A	G	Q	K	A	L	E	D	A	Q	I	P	Y	S	A	V	E	Q	A	C	V	G	Y	V	Y	G	D	S	T	S	G	Q	R	A	.	.	I	Y	H	S	L	G	L	T	G	I	P	I	I
Query Conservation																																															.	.
Alig confidence																																															.	.										.
Template Conservation																																																										.
Template Sequence		E	D	E	Y	T	S	D	L	A	F	K	A	V	E	D	L	L	R	R	H	P	G	A	L	E	G	V	D	A	V	I	V	A	T	N	T	P	D	A	L	F	P	D	T	A	A	L	V	Q	A	R	F	G	L	K	A	.	F	A	Y
Template Known Secondary structure		T	T																		S	T	T	T	T	T	T									S	S		S		S	S	S										T	T				.
Template Predicted Secondary structure																																																										.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	N	N	N	C	S	T	G	S	T	A	L	F	M	A	H	Q	L	I	Q	G	G	L	A	N	C	V	L	A	L	G	F	E	K	M	E	R	G	S	I	G	T	K	F	S	D	R	T	T	P	T	D	K	H	I	E	V	L	I
Query Conservation
Alig confidence				.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	.	L	A	G	P	G	W	I	Y	A	L	A	Q	A	H	A	L	V	E	A	G	L	A	Q	K	V	L	A	V	G	A	E	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.																			T	T	S		S										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	Y	G	L	S	A	H	P	I	T	P	Q	M	F	G	Y	A	G	K	E	H	M	E	K	Y	G	T	K	V	E	H	F	A	K	I	G	W	K	N	H	K	H	S	V	N	N	T	Y	S	Q	F	Q	D	E	Y	S	L	E	E
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	K	S	K	P	V	F	D	F	L	T	I	L	Q	C	C	P	T	S	D	G	A	A	A	A	I	L	S	S	E	E	F	V	Q	Q	Y	G	L	Q	S	K	A	V	E	I	V	A	Q	E	M	M	T	D	L	P	S	T	F	E
Query Conservation
Alig confidence		.	.	.	.																													.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.	.	.	.	.
Template Sequence		.	.	.	.	S	K	I	I	D	W	N	D	R	A	T	A	V	L	F	G	D	G	G	G	A	A	V	V	G	K	V	R	.	.	.	.	.	.	E	G	Y	G	F	R	S	F	V	L	G	A	D	G	T	G	A	K	E	L	Y	H
Template Known Secondary structure		.	.	.	.	G	G	T	S		T	T						T	T	B														.	.	.	.	.	.	T	T												G	G	G		T	T
Template Predicted Secondary structure		.	.	.	.																													.	.	.	.	.	.
Template SS confidence
						141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		269	270	.	.	.	.	.	.	.	.																				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	S	I	I	K	V	V	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	S	K	E	A	A	R	R	C	Y	E	K	S	G	L	T	P	N	D	V	D	V	I	E	L	H	D	C	F	S
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	V	A	P	R	L	P	D	G	T	S	M	K	N	R	L	Y	M	N	G	R	E	V	F	K	F	A	V	R	V	M	N	T	A	T	L	E	A	I	E	K	A	G	L	T	P	E	D	I	R	L	F	V	P	H	Q	A	N	L
Template Known Secondary structure			S	S		S	B		T	T	S		B			S	S																												T			G	G	G		S							S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	E	L	I	T	Y	E	A	L	G	L	C	P	E	G	Q	G	G	T	L	V	D	R	G	D	N	T	Y	G	G	K	W	V	I	N	P	S	G	G	L	I	S	K	G	H	P	L	G	A	T	G	L	A	Q	C	A	E	L	C
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		R	I	I	D	A	A	R	E	R	L	G	L	P	W	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	N	V	D	R	Y	.	.	G	N	T	S	T	A	S	I	P	L	A	L	K	E	A	V
Template Known Secondary structure										T	T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B								.	.		B		G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.																			.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	L	R	G	E	A	G	K	R	Q	V	P	G	A	K	V	A	L	Q	H	N	L	G	L	G	G	A	V	V	V	T	L	Y	R	M	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	A	G	R	I	R	E	G	D	H	V	L	L	V	S	F	G	A	G	L	T	W	A	A	A	V	L	T	W	G
Template Known Secondary structure			.	.	.	.	.	.	.		T	S	S		T	T										T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		291								.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D