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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank264Aligned Residues261
% Identity23%Templated1q5ka_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.94

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290. ........300.........310.........320........
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Query Sequence  SLQLIKRLGNGQFGEVWLGTWN. GNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ
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Template Sequence  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF. . . KNRELQIMRKLDHCNIVR
Template Known Secondary structure  TTTTT



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TTB

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   55....60.........70.........80.........90... ......100.........110.
 
   329330....... ..340.........350.........360. ........370.........380..
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Query Sequence  LYAVVSEEP. . . . . IYIVTEYMSKGSLLDFLKDGEGRA. LKLPNLVDMAAQVAAGMAYIE
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Template Sequence  LRYFFYSSKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH
Template Known Secondary structure 


S



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   112.......120.........130.........140.........150.........160.........170.
 
   383......390.........400.. .......410.........420.........430.........440.
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Query Sequence  RMNYIHRDLRSANILVGNGL. ICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY. RAPELIFGAT
Template Known Secondary structure  TTT




GGG
TTT




TT


TTS


S

S
TTS.

TT
S
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   174.....180.........190.........200.........210.........220.. .......230..
 
   442.......450.........460.........470.........
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Query Sequence  RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPEFKFP
Template Known Secondary structure  S

T.TS
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   233......240.........250.. .......260.........270.........280.........290.
 
   480.........490.........500.........510.........520.........530......
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Query Sequence  . . . ERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQGFLEDYFTATEPQYQPGEN
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Template Sequence  QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA. . HSFFDELRDPNVKLPN
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GGGTS
TTS
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SSGGGS

T..SGGGGGGG
TT


TT
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   295....300.........310.........320.........330...... ...340.........350..
 
   537
Predicted Secondary structure 
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Query Sequence  L
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  G
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   353
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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