Return to main results Retrieve Phyre Job Id

Job DescriptionP39688
Confidence99.36%DateWed Jul 10 14:11:43 BST 2013
Rank465Aligned Residues66
% Identity39%Templated1awwa_
SCOP infoSH3-like barrel SH3-domain SH3-domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.......
Predicted Secondary structure 












































Query SS confidence 



























































Query Sequence  TRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNY
Query Conservation             



  
    



  

 
 
       
        
  
  
   
Alig confidence 














































.











Template Conservation           
 

  
 
    


   

 
 
       

    .  
  
 

  
Template Sequence  SMSTSELKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARD. KNGQEGYIPSNY
Template Known Secondary structure 
SS
S


BSS



SSSSS



SS





SSS

B
.TTS
B

TTT
Template Predicted Secondary structure 























.





Template SS confidence 



























































   2.......10.........20.........30.........40........ .50.........60
 
   138.140....
Predicted Secondary structure 






Query SS confidence 






Query Sequence  VAPVDSI
Query Conservation         
Alig confidence 






Template Conservation 
     
Template Sequence  VTEAEDS
Template Known Secondary structure  B

S


Template Predicted Secondary structure 



Template SS confidence 






   61......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D