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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank153Aligned Residues258
% Identity28%Templatec4fvrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase jak2; PDBTitle: crystal structure of the jak2 pseudokinase domain mutant v617f (mg-2 atp-bound form)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290.. .......300. ........310....
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Query Sequence  WEIPRESLQLIKRLGNGQFGEVWLGTWNG. . . . . . . . NTKVAIKTL. KPGTMSPESFLEE
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Template Sequence  HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA
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   538.540.........550.........560.........570.........580.........590.......
 
   315....320.........330..... ....340.........350.........360.........370...
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Query Sequence  AQIMKKLKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQ
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Template Sequence  ASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC. INILWKLEVAKQ
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   598.600.........610.........620.........630.........640.... .....650......
 
   374.....380.........390.........400.........410.........420....... ..430
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Query Sequence  VAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAK. . . FPI
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Template Sequence  LAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI
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   657..660.........670.........680.........690.........700.........710......
 
   431........440.. .......450.........460.........470.........480.........
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Query Sequence  KWTAPEAALYGR. FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ
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Template Sequence  PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED. . RHQLPA
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   717..720.........730.........740.........750.........760........ .770....
 
   490.........500.........510.........520....
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Query Sequence  DCPISLHELMIHCWKKDPEERPTFEYLQGFLEDYF
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Template Sequence  PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF
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   775....780.........790.........800.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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