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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank273Aligned Residues260
% Identity23%Templatec4e7wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glycogen synthase kinase 3; PDBTitle: structure of gsk3 from ustilago maydis
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290.........300.........310.........320.........
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Query Sequence  SLQLIKRLGNGQFGEVWLGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL
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Template Sequence  AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK. . . RFKNRELQIMRIVKHPNVVDL
Template Known Secondary structure  TTTTT

T...TS

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   37..40.........50.........60.........70.. .......80.........90...
 
   330.... .....340.........350.... .....360.........370.........380.
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Query Sequence  YAVVS. . . . . . . EEPIYIVTEYMSKGSLLDFL. KDGEGRALKLPNLVDMAAQVAAGMAYI
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Template Sequence  KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI
Template Known Secondary structure  SSSSS


STTS


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   94.....100.........110.........120.........130.........140.........150...
 
   382.......390.........400.. .......410.........420.........430.........440
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Query Sequence  ERMNYIHRDLRSANILVGNGL. ICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY
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Template Sequence  HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSICSRY. . YRAPELIFGA
Template Known Secondary structure  TT
S

SGGGTTTT


TT


TT







GG..G

TT
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   154.....160.........170.........180.........190.........200. ........210.
 
   441........450.........460.........470.........480.......
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Query Sequence  GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC. . . . . . . . . . . . .
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Template Sequence  TNYTTNIDIWSTGCVMAELMQ. GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME
Template Known Secondary structure  SS

T.SS
SS

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GGGSS
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   213......220.........230... ......240.........250.........260.........270.
 
   488.490.........500.........510.........520.........530..
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Query Sequence  . . . . . . . . . . . . . . . PQDCPISLHELMIHCWKKDPEERPTFEYLQGFLEDYFTATEPQYQ
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Template Sequence  HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC. . HPFFDELRTGEA
Template Known Secondary structure  S








S
TT



SSGGGS

T..SGGGSTTTSS

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   272.......280.........290.........300.........310....... ..320.........
 
   533....
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Query Sequence  PGENL
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Template Sequence  RMPNG
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TTS
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   330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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