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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank181Aligned Residues247
% Identity28%Templatec3zgwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:maternal embryonic leucine zipper kinase; PDBTitle: crystal structure of maternal embryonic leucine zipper2 kinase (melk) in complex with amp-pnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300.........310.........320.......
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWN. GNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLV
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Template Sequence  KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKN. TLLPRIKTEIEALKNLRHQHIC
Template Known Secondary structure  TT
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   10.........20.........30.........40...... ...50.........60........
 
   328.330..... ....340.........350.........360.........370.........380......
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Query Sequence  QLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY
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Template Sequence  QLYHVLETANKIFMVLEYCPGGELFDYI. . ISQDRLSEEETRVVFRQIVSAVAYVHSQGY
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   72.......80.........90......... 100.........110.........120.........
 
   387..390.........400.........410.........420.........430.........440......
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Query Sequence  IHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK
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Template Sequence  AHRDLKPENLLFDEYHKLKLIDFGLC. . . . . . . . . . . . . . AKSLAYAAPELIQG. . KGSE
Template Known Secondary structure  B




GGG
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   130.........140.........150..... ....160......... 170...
 
   447..450.........460.........470.........480.........490.........500......
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Query Sequence  SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKD
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Template Sequence  ADVWSMGILLYVLMC. GFLPFDDDNVMALYKKIMRG. KYDVPKWLSPSSILLLQQMLQVD
Template Known Secondary structure  .SS
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   191........200..... ....210.........220..... ....230.........240........
 
   507..510........ .520.........530......
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Query Sequence  PEERPTFEYLQG. . . FLEDYFTATEPQYQPGEN
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Template Sequence  PKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFI
Template Known Secondary structure  GGGS

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   249250.........260.........270.........280.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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