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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank202Aligned Residues251
% Identity24%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IPRESLQLIKRLGNGQFGEVWLGTWNGN. TKVAIKTLKPGTMSPESFLEEAQIMKKLKHD
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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TTT


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   16...20.........30.........40.........50.........60.........70.....
 
   325....330..... ....340.........350.........360.........370.........380...
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Query Sequence  KLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERI. . CNAGRFSEDEARFFFQQLISGVSYAHA
Template Known Secondary structure  TB


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   76...80.........90.........100...... ...110.........120.........130...
 
   384.....390.........400. ........410.........420.........430.........440.
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Query Sequence  MNYIHRDLRSANILVGNG. . LICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  MQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . . . . . . . . TPAYIAPEVLLKKE
Template Known Secondary structure  S
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GGG


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   134.....140.........150.........160... ......170.......
 
   442.......450.........460.........470.........480.. .......490......
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Query Sequence  RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG. . . . . YRMPCPQDCPISLH
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Template Sequence  YDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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   193......200.........210.. .......220.........230.........240.........250.
 
   497..500.........510.........520.........530.......
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Query Sequence  ELMIHCWKKDPEERPTFEYLQGFLEDYFTATEPQYQPGENL
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Template Sequence  HLISRIFVADPAKRISIPEIRN. . HEWFLKNLPAGQSIEEI
Template Known Secondary structure  S
SSGGGS

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   252.......260.........270... ......280.........290
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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