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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank250Aligned Residues235
% Identity25%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300.. .......310.........320. .
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNG. NTKVAIKTLK. . . . PGTMSPESFLEEAQIMKKL. K
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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   353......360.........370.........380.........390.........400.........410..
 
   323......330..... ....340.........350.........360.........370.........380.
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Query Sequence  HDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI. . QKSRRFDEARARFYAAEIISALMFL
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   413......420.........430.........440..... ....450.........460.........470
 
   382.......390.........400.........410.........420.........430.........440.
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Query Sequence  ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  HDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEM
Template Known Secondary structure  TT
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GGG
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GGG

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   471........480.........490.........500. ........510.........520
 
   442.......450.........460.........470.........480.........490.........500.
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Query Sequence  RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIH
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILN. DEVVYPTWLHEDATGILKS
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   530.........540......... 550.........560........ .570.........580.......
 
   502.......510.. .....
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Query Sequence  CWKKDPEERPT. . . . . . FEYLQ
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Template Sequence  FMTKNPTMRLGSLTQGGEHAIL
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   588.590.........600.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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